ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart37h08 |
|---|---|
| Clone Library Name | barley_pub |
>ACCO3_LYCES (P10967) 1-aminocyclopropane-1-carboxylate oxidase homolog (Protein| E8) Length = 363 Score = 42.0 bits (97), Expect = 9e-04 Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 5/120 (4%) Frame = -1 Query: 492 LTMGTVKHSDPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAVGEASLVVNVGDFLQLV 313 LTMGT++H+D F P G SLVVN+GDFLQL+ Sbjct: 229 LTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVP----PTPG--SLVVNIGDFLQLL 282 Query: 312 SNDRFKXXXXXXXXXXXXXXXXVACFFRAN---GATVCAP--AVVDGSGPPRYRSVKAEE 148 SND++ + CFF + + + P ++ PP+YR+ ++ Sbjct: 283 SNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKD 342
>G3OX3_ARATH (Q9SVS8) Putative gibberellin 3-beta-dioxygenase 3 (EC 1.14.11.15)| (Gibberellin 3 beta-hydroxylase 3) (GA 3-oxidase 3) (AtGA3ox3) (AtGA3ox4) Length = 349 Score = 32.0 bits (71), Expect = 0.93 Identities = 21/72 (29%), Positives = 28/72 (38%) Frame = -1 Query: 357 EASLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPAVVDGSGP 178 E SLVV +GD ++SN +F+ A F P D + P Sbjct: 262 EGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGPLTSDKNHP 321 Query: 177 PRYRSVKAEEML 142 P YR + EE L Sbjct: 322 PIYRRLIWEEYL 333
>DV4H_CATRO (O04847) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20)| Length = 401 Score = 32.0 bits (71), Expect = 0.93 Identities = 22/66 (33%), Positives = 28/66 (42%) Frame = -1 Query: 492 LTMGTVKHSDPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAVGEASLVVNVGDFLQLV 313 LT GT KHSD F P + A LV+N+ D LQL+ Sbjct: 261 LTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDV-----PFIPGA-LVINIADLLQLI 314 Query: 312 SNDRFK 295 +ND+FK Sbjct: 315 TNDKFK 320
>ISP7_SCHPO (P40902) Sexual differentiation process protein isp7| Length = 397 Score = 32.0 bits (71), Expect = 0.93 Identities = 20/76 (26%), Positives = 35/76 (46%) Frame = -1 Query: 369 PAVGEASLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPAVVD 190 PA G +L+ N+GD + +++N+R+K + F + N V AP + Sbjct: 308 PAPG--ALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAP--LP 363 Query: 189 GSGPPRYRSVKAEEML 142 G GP + E++L Sbjct: 364 GLGPSTAEPIAVEDLL 379
>ACCO1_ORYSA (Q40634) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 322 Score = 31.6 bits (70), Expect = 1.2 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N R+K +A F+ V +PA Sbjct: 218 SIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAVISPA 268
>ACCO3_CUCME (P54847) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4)| (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVC--APAVVDG 187 S+V+N+GD L++++N ++K +A F+ V APA+V+G Sbjct: 213 SIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAVIYPAPALVEG 269
>ACCO_ACTCH (P31237) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVC--APAVVD 190 S+V+N+GD L++++N ++K +A F+ V APA+VD Sbjct: 212 SIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVD 267
>ACCO2_LYCES (P07920) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) (Protein GTOMA) Length = 316 Score = 30.0 bits (66), Expect = 3.5 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFR-ANGATVC-APAVVD 190 S+VVN+GD L++++N ++K +A F+ N A + APA+VD Sbjct: 212 SIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVD 267
>ACCO_PEA (P31239) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 317 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/51 (25%), Positives = 25/51 (49%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+V+N+GD L++++N ++K +A F+ V +PA Sbjct: 212 SIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPA 262
>ACCO_DENCR (Q9ZQZ1) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 210 SIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPA 260
>ACCO1_DORSP (P31238) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 327 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 216 SIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPA 266
>ACCO2_DORSP (Q39705) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) Length = 325 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 216 SIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPA 266
>ACCO4_LYCES (P24157) 1-aminocyclopropane-1-carboxylate oxidase 4 (EC 1.14.17.4)| (ACC oxidase 4) (Ethylene-forming enzyme) (EFE) (Protein pHTOM5) Length = 316 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 212 SIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPA 262
>ACCO1_LYCES (P05116) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein pTOM 13) Length = 315 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 212 SIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPA 262
>ACCO3_PETHY (Q08507) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4)| (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 212 SIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPA 262
>ACCO_DIOKA (Q8S932) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/51 (25%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+V+N+GD L++++N ++K +A F+ V PA Sbjct: 212 SIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPA 262
>ACCO1_PETHY (Q08506) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 212 SIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPA 262
>ELN_CHICK (P07916) Elastin precursor (Tropoelastin) (Fragment)| Length = 750 Score = 29.3 bits (64), Expect = 6.0 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%) Frame = -3 Query: 328 LPAAGVQRQVQEPGA--PR-GVQERGAPGVGGV 239 LP AG+ + +PGA P+ GV G PGVGG+ Sbjct: 640 LPGAGIPQVGVQPGAKPPKFGVPGAGVPGVGGI 672
>EPHA4_MOUSE (Q03137) Ephrin type-A receptor 4 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor SEK) (MPK-3) Length = 986 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 369 PAVGEASLVVNVGDFLQLVSNDRFK 295 P+ E S VV+VGD+LQ + DR+K Sbjct: 905 PSSPEFSAVVSVGDWLQAIKMDRYK 929
>EPHA4_HUMAN (P54764) Ephrin type-A receptor 4 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8) Length = 986 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -1 Query: 369 PAVGEASLVVNVGDFLQLVSNDRFK 295 P+ E S VV+VGD+LQ + DR+K Sbjct: 905 PSSPEFSAVVSVGDWLQAIKMDRYK 929
>ACCO_DIACA (P31528) Probable 1-aminocyclopropane-1-carboxylate oxidase (EC| 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) (Senescence-related protein) Length = 321 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAPA 199 S+VVN+GD L++++N ++K +A F+ V PA Sbjct: 218 SIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPA 268
>ACCO_MUSAC (Q9FR99) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 306 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = -1 Query: 351 SLVVNVGDFLQLVSNDRFKXXXXXXXXXXXXXXXXVACFFRANGATVCAP---AVVDGSG 181 ++V+N GD ++++SN R+K +A F+ + AP A + + Sbjct: 212 AIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAA 271 Query: 180 PP 175 PP Sbjct: 272 PP 273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,052,870 Number of Sequences: 219361 Number of extensions: 765804 Number of successful extensions: 2609 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2311 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2608 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
