Clone Name | rbart37h07 |
---|---|
Clone Library Name | barley_pub |
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 92.4 bits (228), Expect = 5e-19 Identities = 45/98 (45%), Positives = 63/98 (64%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 +F YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+ + DD Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD 357 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 168 P++RKPDI KAK +L WEP V L +GL FR+ L Sbjct: 358 PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 92.4 bits (228), Expect = 5e-19 Identities = 45/98 (45%), Positives = 63/98 (64%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 +F YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+ + DD Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD 357 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 168 P++RKPDI KAK +L WEP V L +GL FR+ L Sbjct: 358 PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 92.4 bits (228), Expect = 5e-19 Identities = 45/98 (45%), Positives = 63/98 (64%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 +F YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+ + DD Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD 357 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 168 P++RKPDI KAK +L WEP V L +GL FR+ L Sbjct: 358 PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 92.4 bits (228), Expect = 5e-19 Identities = 45/98 (45%), Positives = 63/98 (64%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 +F YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+ + DD Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD 357 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 168 P++RKPDI KAK +L WEP V L +GL FR+ L Sbjct: 358 PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 89.7 bits (221), Expect = 3e-18 Identities = 41/87 (47%), Positives = 59/87 (67%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 +F YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+ + DD Sbjct: 296 AFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDD 355 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGL 201 P++R+PDI KAK +L WEP V L +GL Sbjct: 356 PQRRRPDIRKAKLLLGWEPVVPLEEGL 382
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 89.0 bits (219), Expect = 5e-18 Identities = 42/98 (42%), Positives = 64/98 (65%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 +F YV+D+VNGL+ LMN + + P+N+GNP E ++++ A +K+L+ ++ DD Sbjct: 299 AFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDD 358 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 168 P++RKPDI KAK +L WEP V L +GL FR+ L Sbjct: 359 PQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 53.9 bits (128), Expect = 2e-07 Identities = 36/108 (33%), Positives = 56/108 (51%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 SF ++ + V G+++L D P+NIG+ +M E+AE V N ++ + P+ Sbjct: 238 SFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG-PEG 296 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 138 R R D T KE L W P + L+DGL + +E+L +K KA G Sbjct: 297 VRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQL---EKEKAEG 341
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 51.6 bits (122), Expect = 1e-06 Identities = 29/87 (33%), Positives = 46/87 (52%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 SF ++ + V G+++L D P+NIG+ +M E+AE + + E+ + P+ Sbjct: 245 SFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEG 303 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGL 201 R R D T KE L W P + L+DGL Sbjct: 304 VRGRNSDNTLIKEKLGWAPTMKLKDGL 330
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 50.8 bits (120), Expect = 2e-06 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 F +V D+ + ++ LM+ +N+G+ E T+ ELAE VKE++ + + + PD Sbjct: 227 FLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDG 286 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 153 ++ D +K +E + W+PKV L++GLV + E + KK Sbjct: 287 TPRKLMDSSKIQE-MGWKPKVPLKEGLVETYKWYVENVISAKK 328
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 47.8 bits (112), Expect = 1e-05 Identities = 32/108 (29%), Positives = 54/108 (50%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 SF ++ + V G+++L D P+NIG+ +M E+AE V ++ + P+ Sbjct: 244 SFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEG 302 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 138 R R D KE L W P + L++GL + +E++ +K KA G Sbjct: 303 VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQI---EKEKAKG 347
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 45.8 bits (107), Expect = 5e-05 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 F +V D+ ++ LM +N+G+ E T+ ELAE V+ ++ E V P+ Sbjct: 243 FTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEG 302 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGL 201 +R D + ++ L WEP+V LRDG+ Sbjct: 303 VARRVVDSGRMRK-LGWEPRVALRDGI 328
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 45.1 bits (105), Expect = 9e-05 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 F +V D+ + + L++ +NIG+ E T+ ELAE VKE++ E + PD Sbjct: 213 FLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDG 272 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGL 201 ++ D +K L W PKV LRDGL Sbjct: 273 TPRKLMDSSKLAS-LGWTPKVSLRDGL 298
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 44.3 bits (103), Expect = 2e-04 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 1/103 (0%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 F +V D+ + + LM+ +N+G+ E T+ ELAE VKE++ + + PD Sbjct: 227 FLHVDDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDG 286 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 153 ++ D +K L W PK+ L+DGL + + E + K+ Sbjct: 287 TPRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKKQ 328
>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 330 Score = 42.7 bits (99), Expect = 4e-04 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Frame = -1 Query: 458 FCYVADMVNG----LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENT 291 + V D+++ L +M + + N+G ++ LE+ E+ K++ ++ TM Sbjct: 223 YVQVEDLIDAHILALKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMGPRR 282 Query: 290 PDDPRQRKPDITKAKEVLDWEPK 222 DP D TKA+ VL W+PK Sbjct: 283 GGDPDSLVADSTKARTVLGWKPK 305
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 42.7 bits (99), Expect = 4e-04 Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 F Y++D+V+G+++ + D I N+GN ++ E +++ +N + D Sbjct: 223 FTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGD 282 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGL 201 + D++K++++L ++PKV + +GL Sbjct: 283 VLRTYADLSKSEKLLGYKPKVTIEEGL 309
>GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 331 Score = 38.1 bits (87), Expect = 0.011 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -1 Query: 458 FCYVADMVNG----LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENT 291 + +V D+ + L L G+ + NIG+ F+ LE+ +++ E+ TM Sbjct: 223 YVHVVDLADAHILALKYLDAGNKSSAFNIGSAHGFSNLEILNAARKVTGQEIPATMGPRR 282 Query: 290 PDDPRQRKPDITKAKEVLDWEP 225 DP KA+++L W+P Sbjct: 283 AGDPSTLIASSEKARDILGWKP 304
>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose| 4-epimerase) (Galactowaldenase) Length = 348 Score = 37.7 bits (86), Expect = 0.014 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 4/91 (4%) Frame = -1 Query: 458 FCYVADMVNG----LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENT 291 + +V+D+ + L+ L G + +N G ++ E+ ++E+ +V T + Sbjct: 231 YIHVSDLADAHVLALLHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRR 290 Query: 290 PDDPRQRKPDITKAKEVLDWEPKVVLRDGLV 198 P DP Q + +E L W PK DG+V Sbjct: 291 PGDPPQLVAGADRIREQLGWVPKHDRLDGIV 321
>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 339 Score = 37.7 bits (86), Expect = 0.014 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Frame = -1 Query: 458 FCYVADMVNG----LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENT 291 + +V D+ G L K++N N+G +++LE+ + +++ EV + Sbjct: 232 YIHVVDLAEGHVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRR 291 Query: 290 PDDPRQRKPDITKAKEVLDWEPK 222 P D D KAK L WE K Sbjct: 292 PGDIATCFADPAKAKRELGWEAK 314
>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 332 Score = 36.6 bits (83), Expect = 0.032 Identities = 17/66 (25%), Positives = 32/66 (48%) Frame = -1 Query: 419 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 240 L G+ + N+G+ F+ L++ E +++ E+ + P DP KA+ V Sbjct: 241 LRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDILIASSEKARTV 300 Query: 239 LDWEPK 222 L W+P+ Sbjct: 301 LGWKPQ 306
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 36.6 bits (83), Expect = 0.032 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 7/103 (6%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPD 285 +F Y D+V + ++ G I NIG E ++++LA+ + +LI + + EN D Sbjct: 231 NFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVD 290 Query: 284 DPRQRKPDIT----KAKEV--LDWEPKVVLRDGLVLMEDDFRE 174 R + K++++ L W PKV ++G+ + +RE Sbjct: 291 YVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 36.6 bits (83), Expect = 0.032 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 20/123 (16%) Frame = -1 Query: 458 FCYVADMVNGLMKLM--NGDNTGP--INIGNP-GEFTMLELAENVKELIN---------P 321 F + D + L +++ GD INIGNP E ++ ELA + + + P Sbjct: 537 FTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPP 596 Query: 320 EVTVTMTENTP------DDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVP 159 + E+ D RKP I A+ LDWEP + +RD + D F + + Sbjct: 597 FAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIA 656 Query: 158 KKA 150 ++A Sbjct: 657 ERA 659
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 36.6 bits (83), Expect = 0.032 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 20/123 (16%) Frame = -1 Query: 458 FCYVADMVNGLMKLM--NGDNTGP--INIGNP-GEFTMLELAENVKELIN---------P 321 F + D + L +++ GD INIGNP E ++ ELA + + + P Sbjct: 537 FTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPP 596 Query: 320 EVTVTMTENTP------DDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVP 159 + E+ D RKP I A+ LDWEP + +RD + D F + + Sbjct: 597 FAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIA 656 Query: 158 KKA 150 ++A Sbjct: 657 ERA 659
>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF| Length = 314 Score = 36.2 bits (82), Expect = 0.042 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDD 282 F Y D + L+ L+ T INIG+ GE +++ELA V ++ + + + PD Sbjct: 215 FLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDG 274 Query: 281 PRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLA 165 RK ++ + W PK L GL + F +A Sbjct: 275 -TPRKLLSSERLVSMGWRPKTSLELGLAKSYESFVSNVA 312
>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose| 2-epimerase) Length = 338 Score = 36.2 bits (82), Expect = 0.042 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -1 Query: 389 NIGNP--GEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 216 NIG ++LEL + +++ N ++ T D R DI K +DW PKV Sbjct: 264 NIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVS 323 Query: 215 LRDGLVLMED 186 +DG+ M D Sbjct: 324 AKDGVQKMYD 333
>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 334 Score = 35.4 bits (80), Expect = 0.072 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Frame = -1 Query: 458 FCYVADMVNG----LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENT 291 + +V D+ N L +G N+GN F++ E+ E +++ + + Sbjct: 222 YIHVMDLANAHYLACEHLRKDGQSGSFNLGNGKGFSVKEVIEVCRQVTGHPIPAEIAPRR 281 Query: 290 PDDPRQRKPDITKAKEVLDWEPK 222 DP KA+ +L WEPK Sbjct: 282 SGDPASLIASSEKAQTILGWEPK 304
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 35.4 bits (80), Expect = 0.072 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 23/107 (21%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNGDNT----GPINIGNP-GEFTMLELAENVKELINPEVTVTMTEN 294 F +AD + L ++++ +N INIGNP E ++ +L E EL+ + N Sbjct: 539 FTDIADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGE---ELLRQFEAHPLRGN 595 Query: 293 TP------------------DDPRQRKPDITKAKEVLDWEPKVVLRD 207 P D RKP I AK +L+WEP V + + Sbjct: 596 FPPFAGFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSE 642
>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 654 Score = 35.0 bits (79), Expect = 0.093 Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 23/106 (21%) Frame = -1 Query: 458 FCYVADMVNGLMKLM----NGDNTGPINIGNP-GEFTMLELAENVKELINPEVTVTMTEN 294 F + D + L +++ N N INIGNP E+T+++L K +IN + N Sbjct: 536 FTDIDDGIEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLT---KIIINIIYSNNRNYN 592 Query: 293 TP------------------DDPRQRKPDITKAKEVLDWEPKVVLR 210 P D +RKP+I AK++L+W PK +R Sbjct: 593 FPKFSGFNMLSGTNYYGEGYQDIDRRKPNIDIAKKLLNWTPKTKIR 638
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 34.3 bits (77), Expect = 0.16 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 20/123 (16%) Frame = -1 Query: 458 FCYVADMVNGLMKLM--NGDNTGP--INIGNP-GEFTMLELAENVKELIN---------P 321 F + D + L +++ +GD INIGNP E ++ ELA + + + P Sbjct: 537 FTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPP 596 Query: 320 EVTVTMTENTP------DDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVP 159 + E+ D RKP I A+ L WEP + +RD + D F + + Sbjct: 597 FAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIA 656 Query: 158 KKA 150 ++A Sbjct: 657 ERA 659
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 34.3 bits (77), Expect = 0.16 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%) Frame = -1 Query: 392 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 261 INIGNP E ++ EL E + + P + E++ D RKP Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622 Query: 260 ITKAKEVLDWEPKVVLRD 207 I A+ LDWEPK+ +++ Sbjct: 623 IRNARRCLDWEPKIDMQE 640
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 33.5 bits (75), Expect = 0.27 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 10/96 (10%) Frame = -1 Query: 458 FCYVADMVNGLMKLMNG------DNTGP----INIGNPGEFTMLELAENVKELINPEVTV 309 F +V DM + +M +NT P IN+G + T+ ELA+ + +++ + V Sbjct: 211 FLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRV 270 Query: 308 TMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGL 201 + PD ++ D+T+ + L W ++ L GL Sbjct: 271 VFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLEAGL 305
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 33.5 bits (75), Expect = 0.27 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -1 Query: 284 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA 144 D RKP I A+ +LDW+P + LR+ + D F ++A+A Sbjct: 616 DVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA 662
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 33.5 bits (75), Expect = 0.27 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -1 Query: 284 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 150 D RKP I A+ L WEP + +RD + D F + V ++A Sbjct: 615 DVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAERA 659
>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 333 Score = 33.1 bits (74), Expect = 0.36 Identities = 16/66 (24%), Positives = 31/66 (46%) Frame = -1 Query: 419 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 240 L G+ + N+G+ F+ L++ E +++ ++ DP KA+EV Sbjct: 242 LRQGNPSTAFNLGSSTGFSNLQILEAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREV 301 Query: 239 LDWEPK 222 L W+P+ Sbjct: 302 LGWKPQ 307
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 32.3 bits (72), Expect = 0.61 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%) Frame = -1 Query: 392 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 261 INIGNP E ++ EL E + + P + E++ D RKP Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622 Query: 260 ITKAKEVLDWEPKVVLRD 207 I A LDWEPK+ +++ Sbjct: 623 IRNAHRCLDWEPKIDMQE 640
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 32.3 bits (72), Expect = 0.61 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%) Frame = -1 Query: 392 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 261 INIGNP E ++ EL E + + P + E++ D RKP Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622 Query: 260 ITKAKEVLDWEPKVVLRD 207 I A LDWEPK+ +++ Sbjct: 623 IRNAHHCLDWEPKIDMQE 640
>HYPF_METJA (Q58123) Probable carbamoyltransferase hypF (EC 2.1.3.-) (Carbamoyl| phosphate-converting enzyme hypF) ([NiFe]-hydrogenase maturation factor hypF) (Hydrogenase maturation protein hypF) Length = 766 Score = 32.0 bits (71), Expect = 0.79 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEV 315 +FCY+ D +N +++L N + I +F +LAE + E E+ Sbjct: 442 TFCYLRDAINNILRLTNTNKIDAIVCDLHPQFNSTKLAEELSEKFGAEI 490
>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| Length = 328 Score = 32.0 bits (71), Expect = 0.79 Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Frame = -1 Query: 458 FCYVADMVNGLMK----LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENT 291 + +V D+ + ++ L+ G + +N+G T+ EL + ++++ + E Sbjct: 225 YIHVLDLADAHVRAVDYLLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERR 284 Query: 290 PDDPRQRKPDITKAKEVLDWEPK 222 D + KA++VL WEP+ Sbjct: 285 EGDSTTLVANNDKARQVLGWEPQ 307
>GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 329 Score = 31.6 bits (70), Expect = 1.0 Identities = 20/78 (25%), Positives = 32/78 (41%) Frame = -1 Query: 389 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 210 N+GN F++ E+ E V+ + + M DP A+E L W P R Sbjct: 249 NLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWNPS---R 305 Query: 209 DGLVLMEDDFRERLAVPK 156 L ++ D + + PK Sbjct: 306 ADLAIVSDAWEWHSSHPK 323
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%) Frame = -1 Query: 392 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 261 INIGNP E ++ EL E + + P + E++ D RKP Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSCYYGKGYQDVEHRKPS 622 Query: 260 ITKAKEVLDWEPKVVLRD 207 I A LDWEPK+ +++ Sbjct: 623 IRNAHRCLDWEPKIDMQE 640
>CAPI_STAAU (P39858) Protein capI| Length = 334 Score = 31.2 bits (69), Expect = 1.3 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 19/114 (16%) Frame = -1 Query: 458 FCYVADMVNGLMKLMN----------------GDNTGPI---NIGNPGEFTMLELAENVK 336 F YV D+V + +L+ G + P NIGN ++E E ++ Sbjct: 217 FTYVDDIVEAISRLVKKPASPNKEWSGADPDPGSSYAPYKVYNIGNNSPVRLMEFVEAIE 276 Query: 335 ELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRE 174 + E + P D + ++ +D++P+ ++DG+ D + E Sbjct: 277 NKLGKEARKNYMDLQPGDVPETYANVDDLFRDIDFKPETTIQDGVNKFVDWYLE 330
>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL| Length = 356 Score = 31.2 bits (69), Expect = 1.3 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = -1 Query: 263 DITKAKEVLDWEPKVVLRDGL 201 DITKA++VL + PK+ LR+G+ Sbjct: 322 DITKARKVLGYAPKIALREGM 342
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -2 Query: 235 TGSPRSSYVTAWCSWRTTSGSVWQCPRRPRPKATSLR-LAYITNLPEHTHSWVGSSIFV 62 T SP +S+ T CS T SG +WQC P P S++ A+I+ E + G +V Sbjct: 394 TYSPGTSFNTT-CSSCTCSGGLWQCQDLPCPGTCSVQGGAHISTYDEKLYDLHGDCSYV 451
>GALE1_CYATE (O65780) UDP-glucose 4-epimerase GEPI42 (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 354 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Frame = -1 Query: 458 FCYVADMVNG----LMKLMNGDNTG--PINIGNPGEFTMLELAENVKELINPEVTVTMTE 297 + +V D+ +G L KL DN G N+G ++LE+ ++ ++ + M Sbjct: 245 YIHVMDLADGHIAALRKLFTTDNIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKMCP 304 Query: 296 NTPDDPRQRKPDITKAKEVLDWEPK 222 P D KA++ L W+ K Sbjct: 305 RRPGDATAVYASTEKAEKELGWKAK 329
>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 663 Score = 30.4 bits (67), Expect = 2.3 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 24/122 (19%) Frame = -1 Query: 458 FCYVADMVNGLMKLM-NGD---NTGPINIGNP-GEFTMLELAENVKELINPEVTVTMTEN 294 F VAD + L +++ N D N INIGNP E ++ +L E EL+ + N Sbjct: 539 FTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGE---ELLRQFEAHPLRGN 595 Query: 293 TP------------------DDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDF-RER 171 P D RKP I A++++ W P + L + + D F RE Sbjct: 596 FPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELSETIGKTLDFFLREA 655 Query: 170 LA 165 +A Sbjct: 656 MA 657
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/63 (22%), Positives = 29/63 (46%) Frame = -1 Query: 389 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 210 NIGN +++ + +++ + E M P D + D EV+ + P+ ++ Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGDVLETSADTKALYEVIGFTPETTVK 318 Query: 209 DGL 201 DG+ Sbjct: 319 DGV 321
>FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reactive clone 1)| Length = 810 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +3 Query: 303 HRHCHLWVDQLLHVLSKF---QHGEFTWVPNVNGSSVVSIHQLHKTIDHISNVA 455 HR H D+ H+ KF GEF W +V+GS V++I L TI + + Sbjct: 728 HREDH---DKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTITQLETTS 778
>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose| dehydratase 1) (GMD 1) Length = 361 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -1 Query: 290 PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 147 P + K D +KAKE+L W+PKV + +M D E L + K+ K Sbjct: 303 PTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVD---EDLELAKREK 347
>CINA_BACHK (Q6HF34) CinA-like protein| Length = 412 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 353 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 177 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 176 ERLA 165 ER A Sbjct: 395 ERSA 398
>CINA_BACCZ (Q636P5) CinA-like protein| Length = 412 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 353 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 177 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 176 ERLA 165 ER A Sbjct: 395 ERSA 398
>CINA_BACC1 (Q732U5) CinA-like protein| Length = 412 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 353 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 177 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 176 ERLA 165 ER A Sbjct: 395 ERSA 398
>CINA_BACAN (Q81WQ3) CinA-like protein| Length = 412 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 353 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 177 LAENVKEL+ ++ ++ T PD ++P + EP VV L R Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394 Query: 176 ERLA 165 ER A Sbjct: 395 ERSA 398
>GALE1_PEA (Q43070) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 350 Score = 30.0 bits (66), Expect = 3.0 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Frame = -1 Query: 458 FCYVADMVNG----LMKLMNGDNTG--PINIGNPGEFTMLELAENVKELINPEVTVTMTE 297 + +V D+ +G L KL +N G N+G ++LE+ ++ ++ + + Sbjct: 241 YIHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCP 300 Query: 296 NTPDDPRQRKPDITKAKEVLDWEPK 222 P D + KA++ L W+ K Sbjct: 301 RRPGDATEVYASTAKAEKELGWKAK 325
>RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination protein O)| Length = 234 Score = 30.0 bits (66), Expect = 3.0 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Frame = -2 Query: 262 TSQRQRRFLTGSPRSSYVTAWCSWRTTSGS----------VWQCPRRPRPKATSLRLAYI 113 T + R+ L G ++ + T S+R + WQ +P P+ SL L ++ Sbjct: 62 TPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQ--EKPSPQLFSLFLNFL 119 Query: 112 TNLPEHTHSWVGSSIFV 62 +PE H + SS+F+ Sbjct: 120 QRIPETPHPYFFSSMFL 136
>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 30.0 bits (66), Expect = 3.0 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 16/77 (20%) Frame = -1 Query: 392 INIGNP-GEFTMLELAE---------NVKELINPEVTVTMTENTP------DDPRQRKPD 261 INIGNP E ++ +LAE +++ P E+ D RKP Sbjct: 563 INIGNPTNEASIRQLAEILLDSFEDHELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPS 622 Query: 260 ITKAKEVLDWEPKVVLR 210 I A+ +LDW+P + ++ Sbjct: 623 IKNAERLLDWKPTIDMK 639
>NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast precursor (EC| 1.7.7.1) Length = 594 Score = 29.6 bits (65), Expect = 3.9 Identities = 19/83 (22%), Positives = 36/83 (43%) Frame = -1 Query: 395 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 216 P+N P T+L + N + N + + + P + A+ EP+V Sbjct: 5 PVNKIIPSSTTLLSSSNNNRRRNNSSIRCQKAVSPAAETAAVSPSVDAAR----LEPRVE 60 Query: 215 LRDGLVLMEDDFRERLAVPKKAK 147 RDG +++++FR + +K K Sbjct: 61 ERDGFWVLKEEFRSGINPAEKVK 83
>HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82| Length = 704 Score = 29.6 bits (65), Expect = 3.9 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = -1 Query: 356 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 177 ++ ENVKEL T + P + Q + + DWE + ++ V + +FR Sbjct: 254 KVKENVKELEELNKTKPLWTRNPSEVTQEEYNAFYKSISNDWEDPLAVKHFSVEGQLEFR 313 Query: 176 ERLAVPKKA 150 L +PK+A Sbjct: 314 AILFIPKRA 322
>TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)| Length = 755 Score = 29.6 bits (65), Expect = 3.9 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%) Frame = -1 Query: 260 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 117 I KA LD+EP+ GLVL+ EDD + LAVP K + FPAF Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645 Query: 116 H 114 H Sbjct: 646 H 646
>TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)| Length = 755 Score = 29.6 bits (65), Expect = 3.9 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%) Frame = -1 Query: 260 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 117 I KA LD+EP+ GLVL+ EDD + LAVP K + FPAF Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645 Query: 116 H 114 H Sbjct: 646 H 646
>CINA_BACCR (Q81A15) CinA-like protein| Length = 412 Score = 29.6 bits (65), Expect = 3.9 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -1 Query: 353 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 177 LAENVK+++ ++ ++ T PD Q++P + EP VV L R Sbjct: 335 LAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIR 394 Query: 176 ERLA 165 ER A Sbjct: 395 ERTA 398
>SEC10_YEAST (Q06245) Exocyst complex component SEC10| Length = 871 Score = 29.3 bits (64), Expect = 5.1 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = -1 Query: 416 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDP 279 +N NT + N T ++A N L+N T + +N+P+ P Sbjct: 520 LNRTNTLSDSFNNSSSSTQYDVANNSSSLVNSSFTASDIDNSPNSP 565
>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit| Length = 940 Score = 28.9 bits (63), Expect = 6.7 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -1 Query: 254 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 153 KAKE+ + + ++RDG VL+ D+F R+ + ++ Sbjct: 296 KAKELFNRDKDYIVRDGEVLIVDEFTGRVLIGRR 329
>NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 2) (NADH-plastoquinone oxidoreductase chain 2) Length = 501 Score = 28.9 bits (63), Expect = 6.7 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +1 Query: 241 TSFAFVMSGFLWR-GSSGVFSVIVTVTSGLINSFTFSASSSMV 366 TS + + GF W G SG + I +T+GL+N+ T+++S + + Sbjct: 172 TSSSILAYGFSWLYGLSGGETNIQKITNGLLNAETYNSSGTFI 214
>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)| [Contains: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain] Length = 1091 Score = 28.9 bits (63), Expect = 6.7 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Frame = -1 Query: 383 GNPGEFTMLELAENVKELINP-------EVTVTMTENTPDDPRQRKPDITKAKEVLDWEP 225 GN +F+ L + + + EL+ E+TVT + + P +PR+ D +AK + + Sbjct: 647 GNQDKFSYLPIQKGIPELVLKDQKDIALEITVTNSPSDPRNPRKDGDDAHEAKLIATFPD 706 Query: 224 KVVLRDGLVLMEDDFRERLAVPKK 153 L +RE A P+K Sbjct: 707 --------TLTYSAYRELRAFPEK 722
>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 28.9 bits (63), Expect = 6.7 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -1 Query: 338 KELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKV 219 KE VTV + P + + D TKAK+ L+W+P+V Sbjct: 310 KETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRV 349
>ARAE2_ORYSA (Q8H0B6) Putative UDP-arabinose 4-epimerase 2 (EC 5.1.3.5)| (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) Length = 391 Score = 28.9 bits (63), Expect = 6.7 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Frame = -1 Query: 449 VADMVNGLMKLMNGDNTGPINIGNPGEF---TMLELAENVKELINPEVTVTMTENTPDDP 279 V D+V+ +K ++ G + I N G ++ E E K + V+ P D Sbjct: 288 VTDLVDAHVKALDKAQPGKVGIYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDY 347 Query: 278 RQRKPDITKAKEVLDWEPKVV-LRDGL 201 + D +K + L+W + + LR+ L Sbjct: 348 AEVYSDPSKIHDELNWTARYIDLRESL 374
>UVRC_BACSK (Q5WEK8) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 594 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -1 Query: 356 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLME 189 E++E + + E+T + D Q + + KA E LD+E LRD + ME Sbjct: 174 EVSEETNQTMVNEITKFLKNGHSDIKEQLRERMEKAAEDLDFERAKELRDTIAQME 229
>YFCH_ECOLI (P77775) Hypothetical UPF0105 protein yfcH| Length = 297 Score = 28.5 bits (62), Expect = 8.7 Identities = 10/29 (34%), Positives = 21/29 (72%) Frame = -1 Query: 461 SFCYVADMVNGLMKLMNGDNTGPINIGNP 375 ++ ++ DMVNG++ L++ + GP N+ +P Sbjct: 197 AWIHIDDMVNGILWLLDNELRGPFNMVSP 225
>PGK_TETTH (P50313) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 420 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -1 Query: 362 MLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLM 192 +L+ EN + L+ + V + E DP + + + K++L+ PK GLVLM Sbjct: 11 ILKHIENKRVLMRVDFNVPLKEGKVKDPTRIQGSVPSIKKILEQNPK-----GLVLM 62
>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ| Length = 315 Score = 28.5 bits (62), Expect = 8.7 Identities = 19/73 (26%), Positives = 30/73 (41%) Frame = -1 Query: 419 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 240 L G + NIG E T ELA + + + E E+ R+ + +K K Sbjct: 231 LEKGTDGEVYNIGGGNERTNKELASVILKHLGCEELFAHVEDRKGHDRRYAINASKLKNE 290 Query: 239 LDWEPKVVLRDGL 201 L W +V +G+ Sbjct: 291 LGWRQEVTFEEGI 303
>SECA1_MYCTU (P0A5Y8) Preprotein translocase secA 1 subunit| Length = 949 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -1 Query: 254 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 153 KAKE+ + ++RDG VL+ D+F R+ + ++ Sbjct: 296 KAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRR 329
>SECA1_MYCBO (P0A5Y9) Preprotein translocase secA 1 subunit| Length = 949 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -1 Query: 254 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 153 KAKE+ + ++RDG VL+ D+F R+ + ++ Sbjct: 296 KAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRR 329
>ACSA_PASMU (Q9CMW1) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 653 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -3 Query: 231 GAQGRPT*RLGAHGGRLPGAFGSAQEGQGLRPLPCVWRTSPICQSILIVGWVRQYSLLCF 52 G+ G+P + + GG L GA S + +P W T+ VGW+ +S +C+ Sbjct: 269 GSTGKPKGIVHSTGGYLLGALNSFRNVFDNKPNDIFWCTAD-------VGWITGHSYVCY 321
>ESR2_SPAAU (Q9W6M2) Estrogen receptor beta (ER-beta)| Length = 559 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -1 Query: 419 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEV 315 ++NG GP+N P T +L E + E PE+ Sbjct: 255 VLNGPAVGPLNTPQPPALTSKQLIERIMEAEPPEI 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,277,631 Number of Sequences: 219361 Number of extensions: 1443850 Number of successful extensions: 4503 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 4373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4497 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)