ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 7e-74
2dbj|AK104379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 7e-74
3dbj|AK059992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 7e-74
4ref|NM_193188.1| Oryza sativa (japonica cultivar-group), predic... 283 3e-73
5gb|BT016534.1| Zea mays clone Contig367 mRNA sequence 210 3e-51
6gb|AY104907.1| Zea mays PCO117250 mRNA sequence 210 3e-51
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
8dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
9gb|AY086081.1| Arabidopsis thaliana clone 2114 mRNA, complete se... 46 0.11
10gb|AC159436.1| Trypanosoma brucei chromosome 5 clone RPCI93-29K2... 44 0.45
11emb|AL354814.19| Human DNA sequence from clone RP11-94N9 on chro... 44 0.45
12emb|AL671259.1|TBH25N7 Trypanosoma brucei 221 VSG expression sit... 44 0.45
13gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, com... 44 0.45
14gb|AC093427.2| Homo sapiens chromosome 1 clone RP5-1080K5, compl... 44 0.45
15ref|NM_128811.2| Arabidopsis thaliana hydrolase AT2G32520 mRNA, ... 42 1.8
16gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park C... 42 1.8
17gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B15 ma... 42 1.8
18gb|BT006416.1| Arabidopsis thaliana At2g32520 gene, complete cds 42 1.8
19gb|AC153986.8| Mus musculus 6 BAC RP24-105F24 (Roswell Park Canc... 42 1.8
20dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
21gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 42 1.8
22dbj|AK067610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
23gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.5... 42 1.8
24gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cance... 42 1.8
25gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome... 40 7.0
26gb|AC163722.6| Mus musculus BAC clone RP23-447O11 from chromosom... 40 7.0
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.0
28gb|AC131672.3| Mus musculus chromosome UNK clone RP23-314O21, co... 40 7.0
29gb|AC146254.2| Pan troglodytes BAC clone CH251-128L22 from Y, co... 40 7.0
30gb|AC138171.17| Medicago truncatula clone mth2-7f10, complete se... 40 7.0
31gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete se... 40 7.0
32gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete s... 40 7.0
33gb|AC096035.6| Rattus norvegicus 4 BAC CH230-16M16 (Children's H... 40 7.0
34emb|AL356096.11| Human DNA sequence from clone RP11-366K1 on chr... 40 7.0
35emb|BX045613.1|CNS097CX Single read from an extremity of a full-... 40 7.0
36gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, com... 40 7.0
37gb|AF377865.1| Feline papillomavirus putative transforming prote... 40 7.0
38dbj|BS000629.2| Pan troglodytes chromosome Y clone: PTB-194O02, ... 40 7.0
39dbj|BS000552.1| Pan troglodytes chromosome Y clone:PTB-302F24, c... 40 7.0
40gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.0
41gb|AC157978.25| Medicago truncatula clone mth2-47l16, complete s... 40 7.0
42gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.0
43dbj|AK135908.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 7.0
44gb|AF480454.1| Felis domesticus papillomavirus type 1, complete ... 40 7.0
45gb|AC159032.2| Pan troglodytes BAC clone CH251-358H13 from chrom... 40 7.0
46gb|AC149130.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 7.0
47gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-4... 40 7.0
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
49gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, co... 40 7.0
50emb|BX005183.9| Zebrafish DNA sequence from clone CH211-136A14 i... 40 7.0
51gb|AC069164.11|AC069164 Homo sapiens chromosome 13 clone RP11-33... 40 7.0
52gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 40 7.0
53gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, c... 40 7.0
54gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305... 40 7.0
55dbj|AP000416.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 7.0
56gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, c... 40 7.0
57emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c1... 40 7.0
58gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, comple... 40 7.0
59emb|AL606920.5| Mouse DNA sequence from clone RP23-183J6 on chro... 40 7.0
60emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chro... 40 7.0 
>dbj|AK106208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G04, full
           insert sequence
          Length = 1086

 Score =  285 bits (144), Expect = 7e-74
 Identities = 242/275 (88%)
 Strand = Plus / Minus

                                                                       
Query: 245 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 304
           ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct: 891 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 832

                                                                       
Query: 305 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 364
           || ||| |||| ||||||||||||| ||||||  |||||||||||| || ||||||||| 
Sbjct: 831 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 772

                                                                       
Query: 365 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 424
           |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| |||
Sbjct: 771 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 712

                                                                       
Query: 425 gaagccttgagcttctcctccaacgacttggccgcggntacatctgcaaatccaacaaaa 484
           || | ||||||||||||||||| ||||||||| || |  |||||||||||||||||||||
Sbjct: 711 gatgacttgagcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaa 652

                                              
Query: 485 ctgtcaagctccccaaaatgagcctggattggagc 519
           ||||||||||||||||||||||||||||| |||||
Sbjct: 651 ctgtcaagctccccaaaatgagcctggatgggagc 617
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>dbj|AK104379.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G12, full
           insert sequence
          Length = 1010

 Score =  285 bits (144), Expect = 7e-74
 Identities = 242/275 (88%)
 Strand = Plus / Minus

                                                                       
Query: 245 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 304
           ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct: 835 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 776

                                                                       
Query: 305 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 364
           || ||| |||| ||||||||||||| ||||||  |||||||||||| || ||||||||| 
Sbjct: 775 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 716

                                                                       
Query: 365 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 424
           |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| |||
Sbjct: 715 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 656

                                                                       
Query: 425 gaagccttgagcttctcctccaacgacttggccgcggntacatctgcaaatccaacaaaa 484
           || | ||||||||||||||||| ||||||||| || |  |||||||||||||||||||||
Sbjct: 655 gatgacttgagcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaa 596

                                              
Query: 485 ctgtcaagctccccaaaatgagcctggattggagc 519
           ||||||||||||||||||||||||||||| |||||
Sbjct: 595 ctgtcaagctccccaaaatgagcctggatgggagc 561
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>dbj|AK059992.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C04, full
           insert sequence
          Length = 1014

 Score =  285 bits (144), Expect = 7e-74
 Identities = 242/275 (88%)
 Strand = Plus / Minus

                                                                       
Query: 245 gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 304
           ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct: 837 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 778

                                                                       
Query: 305 atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 364
           || ||| |||| ||||||||||||| ||||||  |||||||||||| || ||||||||| 
Sbjct: 777 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 718

                                                                       
Query: 365 gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 424
           |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| |||
Sbjct: 717 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 658

                                                                       
Query: 425 gaagccttgagcttctcctccaacgacttggccgcggntacatctgcaaatccaacaaaa 484
           || | ||||||||||||||||| ||||||||| || |  |||||||||||||||||||||
Sbjct: 657 gatgacttgagcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaa 598

                                              
Query: 485 ctgtcaagctccccaaaatgagcctggattggagc 519
           ||||||||||||||||||||||||||||| |||||
Sbjct: 597 ctgtcaagctccccaaaatgagcctggatgggagc 563
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>ref|NM_193188.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 846

 Score =  283 bits (143), Expect = 3e-73
 Identities = 235/266 (88%)
 Strand = Plus / Minus

                                                                       
Query: 254 gatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtcaatggctccc 313
           ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||| ||| ||
Sbjct: 839 gatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtcaattgctgcc 780

                                                                       
Query: 314 tgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggcgatgcgttc 373
           || ||||||||||||| ||||||  |||||||||||| || ||||||||| |||| ||||
Sbjct: 779 tggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggtgatgtgttc 720

                                                                       
Query: 374 atgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactccagaagccttg 433
           || || || || ||||| |||||||| |||||||||||||||| ||| ||||| | ||||
Sbjct: 719 ataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgccagatgacttg 660

                                                                       
Query: 434 agcttctcctccaacgacttggccgcggntacatctgcaaatccaacaaaactgtcaagc 493
           ||||||||||||| ||||||||| || |  ||||||||||||||||||||||||||||||
Sbjct: 659 agcttctcctccagcgacttggctgccgtgacatctgcaaatccaacaaaactgtcaagc 600

                                     
Query: 494 tccccaaaatgagcctggattggagc 519
           |||||||||||||||||||| |||||
Sbjct: 599 tccccaaaatgagcctggatgggagc 574
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>gb|BT016534.1| Zea mays clone Contig367 mRNA sequence
          Length = 1037

 Score =  210 bits (106), Expect = 3e-51
 Identities = 228/269 (84%)
 Strand = Plus / Minus

                                                                       
Query: 251 gcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtcaatggct 310
           |||||||| ||||| |||||||||||||  |||||||| ||||| |||||||| | ||||
Sbjct: 867 gcagatccgaggaaccggcccatccaagaagagaagcgagaccaggccaggtcgacggct 808

                                                                       
Query: 311 ccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggcgatgcg 370
            |||| ||||||||||||| |||||| |||||| |||||| ||| ||||||||||| | |
Sbjct: 807 tcctggttctcatcagtcagacccatccccttcttcctcttgagtgcctcaggcgaagtg 748

                                                                       
Query: 371 ttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactccagaagcc 430
           ||||||||||| || || ||||||||||||||||| ||||||| ||  |  || ||||  
Sbjct: 747 ttcatgaaggcatgcgaacatccagggtatatgtgaacttcatatggtatcccggaagat 688

                                                                       
Query: 431 ttgagcttctcctccaacgacttggccgcggntacatctgcaaatccaacaaaactgtca 490
           ||||||||||||||||  |||||||| || |  ||||||| ||| |||||||||||||||
Sbjct: 687 ttgagcttctcctccagggacttggctgcagtgacatctgaaaaaccaacaaaactgtca 628

                                        
Query: 491 agctccccaaaatgagcctggattggagc 519
            ||||||| ||||||||||| || |||||
Sbjct: 627 tgctccccgaaatgagcctgtataggagc 599
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>gb|AY104907.1| Zea mays PCO117250 mRNA sequence
          Length = 1130

 Score =  210 bits (106), Expect = 3e-51
 Identities = 228/269 (84%)
 Strand = Plus / Minus

                                                                       
Query: 251 gcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtcaatggct 310
           |||||||| ||||| |||||||||||||  |||||||| ||||| |||||||| | ||||
Sbjct: 880 gcagatccgaggaaccggcccatccaagaagagaagcgagaccaggccaggtcgacggct 821

                                                                       
Query: 311 ccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggcgatgcg 370
            |||| ||||||||||||| |||||| |||||| |||||| ||| ||||||||||| | |
Sbjct: 820 tcctggttctcatcagtcagacccatccccttcttcctcttgagtgcctcaggcgaagtg 761

                                                                       
Query: 371 ttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactccagaagcc 430
           ||||||||||| || || ||||||||||||||||| ||||||| ||  |  || ||||  
Sbjct: 760 ttcatgaaggcatgcgaacatccagggtatatgtgaacttcatatggtatcccggaagat 701

                                                                       
Query: 431 ttgagcttctcctccaacgacttggccgcggntacatctgcaaatccaacaaaactgtca 490
           ||||||||||||||||  |||||||| || |  ||||||| ||| |||||||||||||||
Sbjct: 700 ttgagcttctcctccagggacttggctgcagtgacatctgaaaaaccaacaaaactgtca 641

                                        
Query: 491 agctccccaaaatgagcctggattggagc 519
            ||||||| ||||||||||| || |||||
Sbjct: 640 tgctccccgaaatgagcctgtataggagc 612
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  198 bits (100), Expect = 1e-47
 Identities = 184/212 (86%)
 Strand = Plus / Minus

                                                                            
Query: 245      gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 304
                ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct: 19135808 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 19135749

                                                                            
Query: 305      atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 364
                || ||| |||| ||||||||||||| ||||||  |||||||||||| || ||||||||| 
Sbjct: 19135748 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 19135689

                                                                            
Query: 365      gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 424
                |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| |||
Sbjct: 19135688 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 19135629

                                                
Query: 425      gaagccttgagcttctcctccaacgacttggc 456
                || | ||||||||||||||||| |||||||||
Sbjct: 19135628 gatgacttgagcttctcctccagcgacttggc 19135597



 Score =  103 bits (52), Expect = 6e-19
 Identities = 55/56 (98%)
 Strand = Plus / Minus

                                                                        
Query: 464      acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggattggagc 519
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 19135310 acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggatgggagc 19135255



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 218     attcagagaaccatatggatg 238
               |||||||||||||||||||||
Sbjct: 9273040 attcagagaaccatatggatg 9273060
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>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0702H08
          Length = 166899

 Score =  198 bits (100), Expect = 1e-47
 Identities = 184/212 (86%)
 Strand = Plus / Minus

                                                                          
Query: 245    gctcatgcagatcccaggaaacggcccatccaagtggagaagcgggaccatgccaggtca 304
              ||||| || ||||| |||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct: 101225 gctcacgccgatccaaggaaacgacccatccaagtcgagaagcgagaccaggccaggtca 101166

                                                                          
Query: 305    atggctccctgattctcatcagtcaaacccatgcccttcctcctctcgagggcctcaggc 364
              || ||| |||| ||||||||||||| ||||||  |||||||||||| || ||||||||| 
Sbjct: 101165 attgctgcctggttctcatcagtcagacccatctccttcctcctcttgacggcctcaggt 101106

                                                                          
Query: 365    gatgcgttcatgaaggcgtgggagcatccagggtatatgtggacttcatgtgccactcca 424
              |||| |||||| || || || ||||| |||||||| |||||||||||||||| ||| |||
Sbjct: 101105 gatgtgttcataaaagcatgcgagcagccagggtagatgtggacttcatgtggcacgcca 101046

                                              
Query: 425    gaagccttgagcttctcctccaacgacttggc 456
              || | ||||||||||||||||| |||||||||
Sbjct: 101045 gatgacttgagcttctcctccagcgacttggc 101014



 Score =  103 bits (52), Expect = 6e-19
 Identities = 55/56 (98%)
 Strand = Plus / Minus

                                                                      
Query: 464    acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggattggagc 519
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 100727 acatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctggatgggagc 100672
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>gb|AY086081.1| Arabidopsis thaliana clone 2114 mRNA, complete sequence
          Length = 931

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 atgtggacttcatgtgccactccagaagccttgagcttctcctccaacgacttggccgcg 460
           ||||| ||||||||||| |||||||| || || |||||||| || |    ||| || || 
Sbjct: 614 atgtgaacttcatgtgctactccagacgctttcagcttctcttcgagattctttgctgcc 555

                                                             
Query: 461 gntacatctgcaaatccaacaaaactgtcaagctccccaaaatgagcctg 510
           |  ||||| | ||| ||||||||| |||| ||||| ||||||||||||||
Sbjct: 554 gtgacatcagaaaaaccaacaaaattgtcgagctctccaaaatgagcctg 505
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>gb|AC159436.1| Trypanosoma brucei chromosome 5 clone RPCI93-29K2, complete sequence
          Length = 135147

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 42   ccttccctggagatattccatc 63
            ||||||||||||||||||||||
Sbjct: 2237 ccttccctggagatattccatc 2216
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>emb|AL354814.19| Human DNA sequence from clone RP11-94N9 on chromosome 13q13.3-14.3
             Contains a guanine nucleotide binding protein (G protein),
             gamma 5 (GNG5) pseudogene, complete sequence
          Length = 70126

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 243   ttgctcatgcagatcccaggaaacggccca 272
             |||||| ||||||||||||||||| |||||
Sbjct: 64827 ttgctcctgcagatcccaggaaacagccca 64856
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>emb|AL671259.1|TBH25N7 Trypanosoma brucei 221 VSG expression site BAC
          Length = 123706

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 42    ccttccctggagatattccatc 63
             ||||||||||||||||||||||
Sbjct: 25527 ccttccctggagatattccatc 25548
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>gb|AC015724.9| Homo sapiens chromosome 17, clone RP11-45J24, complete sequence
          Length = 189055

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 212    tacatcattcagagaaccatat 233
              ||||||||||||||||||||||
Sbjct: 106483 tacatcattcagagaaccatat 106504
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>gb|AC093427.2| Homo sapiens chromosome 1 clone RP5-1080K5, complete sequence
          Length = 131877

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 76    aaccacaaccacaacacaacacaaaa 101
             |||||||||||||||| |||||||||
Sbjct: 67258 aaccacaaccacaacaaaacacaaaa 67283
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>ref|NM_128811.2| Arabidopsis thaliana hydrolase AT2G32520 mRNA, complete cds
          Length = 1118

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 401 atgtggacttcatgtgccactccagaagccttgagcttctc 441
           ||||| ||||||||||| |||||||| || || ||||||||
Sbjct: 666 atgtgaacttcatgtgctactccagacgctttcagcttctc 626



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 479 acaaaactgtcaagctccccaaaatgagcctg 510
           |||||| |||| ||||| ||||||||||||||
Sbjct: 588 acaaaattgtcgagctctccaaaatgagcctg 557
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>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161577

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 473   aatccaacaaaactgtcaagctccc 497
             |||||||||||||||| ||||||||
Sbjct: 17558 aatccaacaaaactgtgaagctccc 17534
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>gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B15 map TEn5, complete
             sequence
          Length = 78732

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 401   atgtggacttcatgtgccactccagaagccttgagcttctc 441
             ||||| ||||||||||| |||||||| || || ||||||||
Sbjct: 26332 atgtgaacttcatgtgctactccagacgctttcagcttctc 26372



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 479   acaaaactgtcaagctccccaaaatgagcctg 510
             |||||| |||| ||||| ||||||||||||||
Sbjct: 26494 acaaaattgtcgagctctccaaaatgagcctg 26525
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>gb|BT006416.1| Arabidopsis thaliana At2g32520 gene, complete cds
          Length = 720

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 401 atgtggacttcatgtgccactccagaagccttgagcttctc 441
           ||||| ||||||||||| |||||||| || || ||||||||
Sbjct: 572 atgtgaacttcatgtgctactccagacgctttcagcttctc 532



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 479 acaaaactgtcaagctccccaaaatgagcctg 510
           |||||| |||| ||||| ||||||||||||||
Sbjct: 494 acaaaattgtcgagctctccaaaatgagcctg 463
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>gb|AC153986.8| Mus musculus 6 BAC RP24-105F24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 162415

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     gtttatgtgacgtgttcagaa 29
             |||||||||||||||||||||
Sbjct: 21329 gtttatgtgacgtgttcagaa 21349
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>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0667A10
          Length = 152237

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   attcagagaaccatatggatg 238
             |||||||||||||||||||||
Sbjct: 49634 attcagagaaccatatggatg 49654
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 415     tgccactccagaagccttgag 435
               |||||||||||||||||||||
Sbjct: 2567360 tgccactccagaagccttgag 2567340
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>dbj|AK067610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112F12, full
            insert sequence
          Length = 2264

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  attcagagaaccatatggatg 238
            |||||||||||||||||||||
Sbjct: 2100 attcagagaaccatatggatg 2080
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>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence
          Length = 286758

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    acccatgcccttcctcctctc 351
              |||||||||||||||||||||
Sbjct: 155183 acccatgcccttcctcctctc 155163
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>gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208897

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 331   acccatgcccttcctcctctc 351
             |||||||||||||||||||||
Sbjct: 44461 acccatgcccttcctcctctc 44481
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>gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome 3, complete sequence
          Length = 204419

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     taaccacaaccacaacacaa 94
              ||||||||||||||||||||
Sbjct: 100806 taaccacaaccacaacacaa 100825
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>gb|AC163722.6| Mus musculus BAC clone RP23-447O11 from chromosome 19, complete
             sequence
          Length = 178562

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   cccatgcccttcctcctctc 351
             ||||||||||||||||||||
Sbjct: 80775 cccatgcccttcctcctctc 80794
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 189     tgagctgactgacagacacc 208
               ||||||||||||||||||||
Sbjct: 7276375 tgagctgactgacagacacc 7276356
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>gb|AC131672.3| Mus musculus chromosome UNK clone RP23-314O21, complete sequence
          Length = 199837

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    tctgagctgactgacagaca 206
              ||||||||||||||||||||
Sbjct: 192476 tctgagctgactgacagaca 192457
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>gb|AC146254.2| Pan troglodytes BAC clone CH251-128L22 from Y, complete sequence
          Length = 177240

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    gtgttcagaagtgtttcatt 39
             ||||||||||||||||||||
Sbjct: 43736 gtgttcagaagtgtttcatt 43755
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>gb|AC138171.17| Medicago truncatula clone mth2-7f10, complete sequence
          Length = 104336

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   catctgcaaatccaacaaaa 484
             ||||||||||||||||||||
Sbjct: 28075 catctgcaaatccaacaaaa 28094
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>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence
          Length = 117358

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   catctgcaaatccaacaaaa 484
             ||||||||||||||||||||
Sbjct: 94025 catctgcaaatccaacaaaa 94006
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>gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete sequence
          Length = 113470

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   catctgcaaatccaacaaaa 484
             ||||||||||||||||||||
Sbjct: 20365 catctgcaaatccaacaaaa 20384
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>gb|AC096035.6| Rattus norvegicus 4 BAC CH230-16M16 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 228433

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     accacaaccacaacacaaca 96
              ||||||||||||||||||||
Sbjct: 129673 accacaaccacaacacaaca 129692
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>emb|AL356096.11| Human DNA sequence from clone RP11-366K1 on chromosome 13 Contains a
              novel gene and a CpG island, complete sequence
          Length = 190101

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    ccagacattttattcttctg 190
              ||||||||||||||||||||
Sbjct: 176645 ccagacattttattcttctg 176626
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>emb|BX045613.1|CNS097CX Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC19DD11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 782

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  acaaccacaacacaacacaa 99
           ||||||||||||||||||||
Sbjct: 140 acaaccacaacacaacacaa 121
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>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence
          Length = 198470

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   agaagccttgagcttctcct 443
             ||||||||||||||||||||
Sbjct: 44748 agaagccttgagcttctcct 44729
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>gb|AF377865.1| Feline papillomavirus putative transforming protein E6 (E6), putative
            transforming protein E7 (E7), putative replication
            protein E1 (E1), and putative regulatory protein E2 (E2)
            genes, complete cds; putative protein E4 (E4) gene,
            partial cds; and putative minor capsid protein L2 (L2)
            and putative major capsid protein L1 (L1) genes, complete
            cds
          Length = 8300

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 481  aaaactgtcaagctccccaa 500
            ||||||||||||||||||||
Sbjct: 3542 aaaactgtcaagctccccaa 3561
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>dbj|BS000629.2| Pan troglodytes chromosome Y clone: PTB-194O02, complete sequence
          Length = 184689

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     gtgttcagaagtgtttcatt 39
              ||||||||||||||||||||
Sbjct: 109378 gtgttcagaagtgtttcatt 109397
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>dbj|BS000552.1| Pan troglodytes chromosome Y clone:PTB-302F24, complete sequences
          Length = 157728

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     gtgttcagaagtgtttcatt 39
              ||||||||||||||||||||
Sbjct: 100716 gtgttcagaagtgtttcatt 100697
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 20       gtgttcagaagtgtttcatt 39
                ||||||||||||||||||||
Sbjct: 18032323 gtgttcagaagtgtttcatt 18032304
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>gb|AC157978.25| Medicago truncatula clone mth2-47l16, complete sequence
          Length = 125021

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   catctgcaaatccaacaaaa 484
             ||||||||||||||||||||
Sbjct: 80937 catctgcaaatccaacaaaa 80918
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>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060E18, from chromosome 3, complete sequence
          Length = 147983

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   tgagctgactgacagacacc 208
             ||||||||||||||||||||
Sbjct: 27631 tgagctgactgacagacacc 27612
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>dbj|AK135908.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420436A12
            product:unclassifiable, full insert sequence
          Length = 3733

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 77   accacaaccacaacacaacacaaa 100
            ||||||||||||||| ||||||||
Sbjct: 3361 accacaaccacaacaaaacacaaa 3384
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>gb|AF480454.1| Felis domesticus papillomavirus type 1, complete genome
          Length = 8300

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 481  aaaactgtcaagctccccaa 500
            ||||||||||||||||||||
Sbjct: 3682 aaaactgtcaagctccccaa 3701
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>gb|AC159032.2| Pan troglodytes BAC clone CH251-358H13 from chromosome unknown,
             complete sequence
          Length = 183880

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   ccttgagcttctcctccaac 448
             ||||||||||||||||||||
Sbjct: 60034 ccttgagcttctcctccaac 60053
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>gb|AC149130.2| Medicago truncatula chromosome 2 BAC clone mth2-193n2, complete
             sequence
          Length = 132313

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    ccacaaccacaacacaacac 97
             ||||||||||||||||||||
Sbjct: 66862 ccacaaccacaacacaacac 66881
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>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete
             sequence
          Length = 126437

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    ccacaaccacaacacaacac 97
             ||||||||||||||||||||
Sbjct: 32924 ccacaaccacaacacaacac 32905
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 189     tgagctgactgacagacacc 208
               ||||||||||||||||||||
Sbjct: 7274270 tgagctgactgacagacacc 7274251
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>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence
          Length = 226696

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   agaagccttgagcttctcct 443
             ||||||||||||||||||||
Sbjct: 36110 agaagccttgagcttctcct 36129
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>emb|BX005183.9| Zebrafish DNA sequence from clone CH211-136A14 in linkage group 3,
             complete sequence
          Length = 168366

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   aaatccaacaaaactgtcaa 491
             ||||||||||||||||||||
Sbjct: 53125 aaatccaacaaaactgtcaa 53106
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>gb|AC069164.11|AC069164 Homo sapiens chromosome 13 clone RP11-338F18, complete sequence
          Length = 169903

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   ccagacattttattcttctg 190
             ||||||||||||||||||||
Sbjct: 25189 ccagacattttattcttctg 25170
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>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 427    agccttgagcttctcctcca 446
              ||||||||||||||||||||
Sbjct: 103270 agccttgagcttctcctcca 103251
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>gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, complete sequence
          Length = 158617

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    agaagccttgagcttctcct 443
              ||||||||||||||||||||
Sbjct: 105927 agaagccttgagcttctcct 105908
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>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence
          Length = 166978

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   agaagccttgagcttctcct 443
             ||||||||||||||||||||
Sbjct: 43719 agaagccttgagcttctcct 43700
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>dbj|AP000416.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLE3
          Length = 3059

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 465 catctgcaaatccaacaaaa 484
           ||||||||||||||||||||
Sbjct: 725 catctgcaaatccaacaaaa 706
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>gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, complete sequence
          Length = 148280

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    gtgttcagaagtgtttcatt 39
             ||||||||||||||||||||
Sbjct: 70380 gtgttcagaagtgtttcatt 70361
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>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE
          Length = 136068

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    ccacaaccacaacacaacac 97
             ||||||||||||||||||||
Sbjct: 33011 ccacaaccacaacacaacac 33030
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>gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, complete sequence
          Length = 179732

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    accacaaccacaacacaacacaaa 100
             ||||||||||||||| ||||||||
Sbjct: 27998 accacaaccacaacaaaacacaaa 27975
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>emb|AL606920.5| Mouse DNA sequence from clone RP23-183J6 on chromosome 3, complete
             sequence
          Length = 89297

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    taaccacaaccacaacacaa 94
             ||||||||||||||||||||
Sbjct: 86079 taaccacaaccacaacacaa 86060
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>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete
              sequence
          Length = 205589

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    ttctgagctgactgacagacacca 209
              |||||||||||| |||||||||||
Sbjct: 142386 ttctgagctgacagacagacacca 142409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,800,880
Number of Sequences: 3902068
Number of extensions: 4800880
Number of successful extensions: 100636
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100358
Number of HSP's gapped (non-prelim): 276
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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