ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL844843.4| Mouse DNA sequence from clone RP23-376P3 on chro... 44 0.040
2ref|NM_113015.2| Arabidopsis thaliana unknown protein AT3G21200 ... 40 0.62
3gb|AC021064.20| Homo sapiens 3 BAC RP11-49A15 (Roswell Park Canc... 40 0.62
4gb|AY062654.1| Arabidopsis thaliana Unknown protein (At3g21200; ... 40 0.62
5emb|BX822509.1|CNS0A5Z8 Arabidopsis thaliana Full-length cDNA Co... 40 0.62
6emb|BX826201.1|CNS0A4ZB Arabidopsis thaliana Full-length cDNA Co... 40 0.62
7gb|AY087867.1| Arabidopsis thaliana clone 39041 mRNA, complete s... 40 0.62
8gb|BT002574.1| Arabidopsis thaliana Unknown protein (At3g21200) ... 40 0.62
9dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 0.62
10gb|AY706117.1| Philautus sp. FB-6 12S ribosomal RNA gene, partia... 38 2.5
11gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 2.5
12gb|AC004861.1| Homo sapiens PAC clone RP4-696N1 from 7, complete... 38 2.5
13emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 i... 38 2.5
14emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chr... 38 2.5
15emb|AL139812.11| Human DNA sequence from clone RP1-19N1 on chrom... 38 2.5
16emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome;... 38 2.5
17gb|AC007992.12| Homo sapiens chromosome 8, clone RP11-44N17, com... 38 2.5
18gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chro... 38 2.5
19gb|AC015998.8|AC015998 Homo sapiens, clone RP11-15J14, complete ... 38 2.5
20gb|AC018479.2|AC018479 Drosophila melanogaster, chromosome 3R, r... 38 2.5
21gb|AC023115.6| Homo sapiens BAC clone RP11-269A16 from 2, comple... 38 2.5
22gb|AC079043.27| Mus musculus strain C57BL/6J chromosome 16 clone... 38 2.5
23gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone... 38 2.5
24gb|AE003697.4| Drosophila melanogaster chromosome 3R, section 35... 38 2.5
25emb|AL021182.1|HSU19H10 Human DNA sequence from clone LL0XNC01-1... 38 2.5
26gb|AC087064.27| Mus musculus strain C57BL/6J chromosome 16 clone... 38 2.5
27dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 2.5
28gb|AC117682.11| Mus musculus chromosome 1, clone RP23-436K7, com... 36 9.7
29gb|AC117721.8| Mus musculus chromosome 1, clone RP24-196D2, comp... 36 9.7
30gb|AC011250.6| Drosophila melanogaster clone BACR21B19, complete... 36 9.7
31gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21... 36 9.7
32gb|AC145690.4| Pan troglodytes BAC clone CH251-277H18 from X, co... 36 9.7
33gb|AY814841.1| Schistosoma japonicum SJCHGC00439 protein mRNA, c... 36 9.7
34gb|AC147051.2| Mus musculus BAC clone RP23-90H22 from chromosome... 36 9.7
35gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com... 36 9.7
36emb|CR974489.8| Mouse DNA sequence from clone RP23-78L13 on chro... 36 9.7
37gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosom... 36 9.7
38gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, co... 36 9.7
39gb|AC127276.3| Mus musculus BAC clone RP24-221M17 from chromosom... 36 9.7
40gb|U40412.1| Caenorhabditis elegans cosmid F46G11, complete sequ... 36 9.7
41gb|AC113463.8| Mus musculus chromosome 1, clone RP23-40O18, comp... 36 9.7
42emb|AL590410.13| Human DNA sequence from clone RP11-541G7 on chr... 36 9.7
43emb|AL590681.5| Human DNA sequence from clone RP11-163N15 on chr... 36 9.7
44emb|AL512641.9| Human DNA sequence from clone RP11-139J15 on chr... 36 9.7
45emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chr... 36 9.7
46emb|AL355520.8| Human DNA sequence from clone RP4-595C2 on chrom... 36 9.7
47emb|AL159986.22| Human DNA sequence from clone RP11-648N19 on ch... 36 9.7
48emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chr... 36 9.7
49gb|AC158960.4| Mus musculus chromosome 1, clone RP23-315O2, comp... 36 9.7
50emb|CR628338.1| Legionella pneumophila str. Paris plasmid pLPP, ... 36 9.7
51emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, B... 36 9.7
52emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BA... 36 9.7
53gb|AC148449.2| Xenopus tropicalis clone CH216-118D6, complete se... 36 9.7
54gb|AC099689.4| Homo sapiens chromosome 18, clone RP11-849I19, co... 36 9.7
55gb|AC026320.25| Homo sapiens 3 BAC RP11-655G22 (Roswell Park Can... 36 9.7
56gb|AC090377.15| Homo sapiens chromosome 18, clone RP11-866E20, c... 36 9.7
57gb|AC135106.8| Pan troglodytes clone rp43-48a6, complete sequence 36 9.7
58gb|AC138581.23| Pan troglodytes clone ptb-142b7, complete sequence 36 9.7
59gb|AC107990.5| Homo sapiens chromosome 18, clone RP11-103A19, co... 36 9.7
60gb|AC010915.8| Drosophila melanogaster, chromosome 4, region 101... 36 9.7
61gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, com... 36 9.7
62emb|BX323865.6| Zebrafish DNA sequence from clone CH211-134N22 i... 36 9.7
63emb|BX511032.6| Zebrafish DNA sequence from clone CH211-114B16 i... 36 9.7
64gb|AC159297.3| Mus musculus BAC clone RP23-258F9 from chromosome... 36 9.7
65dbj|AK081228.1| Mus musculus adult male corpus striatum cDNA, RI... 36 9.7
66gb|AC006285.13| Homo sapiens chromosome 22 clone p1087l10 map 22... 36 9.7
67gb|AC016025.14| Homo sapiens chromosome 22 clone b342k14 map 22q... 36 9.7
68gb|AE002098.2| Neisseria meningitidis MC58, complete genome 36 9.7
69dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
70gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 36 9.7
71gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, compl... 36 9.7
72gb|AC084511.1|CBRG17D06 Caenorhabditis briggsae cosmid G17D06, c... 36 9.7
73gb|AC078962.30| Homo sapiens 12 BAC RP11-338E21 (Roswell Park Ca... 36 9.7
74gb|AC084073.22| Mus musculus strain C57BL/6J chromosome 1 clone ... 36 9.7
75dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
76dbj|AK106916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.7
77emb|AL365294.4|CNS05TF4 Human chromosome 14 DNA sequence BAC R-7... 36 9.7
78emb|BX323056.5| Zebrafish DNA sequence from clone DKEY-97O5 in l... 36 9.7
79gb|AC007452.1|AC007452 Drosophila melanogaster, chromosome 2R, r... 36 9.7
80gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32... 36 9.7
81gb|AE003845.4| Drosophila melanogaster chromosome 4, section 1 o... 36 9.7
82gb|AC006256.1|AC006256 Homo sapiens chromosome 18, clone hRPK.12... 36 9.7
83gb|AC005900.1|AC005900 Homo sapiens chromosome 17, clone hRPK.99... 36 9.7
84gb|AC138552.3| Cercopithecus aethiops clone CH252-371N21, comple... 36 9.7
85gb|AC131774.4| Mus musculus BAC clone RP24-311P6 from 12, comple... 36 9.7
86gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, comple... 36 9.7
87emb|AL805924.5| Mouse DNA sequence from clone RP23-329M9 on chro... 36 9.7 
>emb|AL844843.4| Mouse DNA sequence from clone RP23-376P3 on chromosome X, complete
             sequence
          Length = 193470

 Score = 44.1 bits (22), Expect = 0.040
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 39    actctacataaaaaatcaactc 60
             ||||||||||||||||||||||
Sbjct: 59711 actctacataaaaaatcaactc 59732
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>ref|NM_113015.2| Arabidopsis thaliana unknown protein AT3G21200 mRNA, complete cds
          Length = 1541

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  acagatgaaagctccatgat 30
           ||||||||||||||||||||
Sbjct: 240 acagatgaaagctccatgat 221
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>gb|AC021064.20| Homo sapiens 3 BAC RP11-49A15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162895

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     acagtaactctacataaaaa 52
              ||||||||||||||||||||
Sbjct: 146576 acagtaactctacataaaaa 146595
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>gb|AY062654.1| Arabidopsis thaliana Unknown protein (At3g21200; MXL8.5) mRNA,
           complete cds
          Length = 1096

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  acagatgaaagctccatgat 30
           ||||||||||||||||||||
Sbjct: 238 acagatgaaagctccatgat 219
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>emb|BX822509.1|CNS0A5Z8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB43ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1081

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  acagatgaaagctccatgat 30
           ||||||||||||||||||||
Sbjct: 226 acagatgaaagctccatgat 207
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>emb|BX826201.1|CNS0A4ZB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL90ZG07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1089

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  acagatgaaagctccatgat 30
           ||||||||||||||||||||
Sbjct: 226 acagatgaaagctccatgat 207
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>gb|AY087867.1| Arabidopsis thaliana clone 39041 mRNA, complete sequence
          Length = 1125

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  acagatgaaagctccatgat 30
           ||||||||||||||||||||
Sbjct: 240 acagatgaaagctccatgat 221
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>gb|BT002574.1| Arabidopsis thaliana Unknown protein (At3g21200) mRNA, complete cds
          Length = 989

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  acagatgaaagctccatgat 30
           ||||||||||||||||||||
Sbjct: 221 acagatgaaagctccatgat 202
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>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8
          Length = 85599

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    acagatgaaagctccatgat 30
             ||||||||||||||||||||
Sbjct: 18119 acagatgaaagctccatgat 18100
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>gb|AY706117.1| Philautus sp. FB-6 12S ribosomal RNA gene, partial sequence;
          mitochondrial
          Length = 375

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 45 cataaaaaatcaactcaca 63
          |||||||||||||||||||
Sbjct: 8  cataaaaaatcaactcaca 26
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 37      taactctacataaaaaatc 55
               |||||||||||||||||||
Sbjct: 5945513 taactctacataaaaaatc 5945495
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>gb|AC004861.1| Homo sapiens PAC clone RP4-696N1 from 7, complete sequence
          Length = 134071

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 21    gctccatgatttacagtaactct 43
             |||||| ||||||||||||||||
Sbjct: 39227 gctccaagatttacagtaactct 39205
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>emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 in linkage group 7,
              complete sequence
          Length = 168455

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 31     ttacagtaactctacataaaaaa 53
              |||||||||||||||| ||||||
Sbjct: 112359 ttacagtaactctacagaaaaaa 112381
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>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the
             3' end of the PEX14 gene for peroxisomal biogenesis factor
             14, the 3' end of the gene for a novel protein (FLJ34970,
             FLJ20321, FLJ12223) and two CpG islands, complete sequence
          Length = 143285

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    ataaaaaatcaactcacag 64
             |||||||||||||||||||
Sbjct: 16945 ataaaaaatcaactcacag 16963
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>emb|AL139812.11| Human DNA sequence from clone RP1-19N1 on chromosome Xq21.33-22.3
             Contains the gene for a novel protein similar to
             chondroitin sulfate GalNAcT-2 (GALNACT-2), complete
             sequence
          Length = 144242

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    acagtaactctacataaaa 51
             |||||||||||||||||||
Sbjct: 25321 acagtaactctacataaaa 25339
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>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7
          Length = 349323

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ctacataaaaaatcaactc 60
              |||||||||||||||||||
Sbjct: 175990 ctacataaaaaatcaactc 175972
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>gb|AC007992.12| Homo sapiens chromosome 8, clone RP11-44N17, complete sequence
          Length = 146921

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 43    tacataaaaaatcaactca 61
             |||||||||||||||||||
Sbjct: 68949 tacataaaaaatcaactca 68931
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>gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 16 clone
              ct7-342a4, complete sequence
          Length = 154201

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      cacagacacagatgaaagc 22
              |||||||||||||||||||
Sbjct: 121291 cacagacacagatgaaagc 121273
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>gb|AC015998.8|AC015998 Homo sapiens, clone RP11-15J14, complete sequence
          Length = 156873

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    tacataaaaaatcaactca 61
             |||||||||||||||||||
Sbjct: 22573 tacataaaaaatcaactca 22591
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>gb|AC018479.2|AC018479 Drosophila melanogaster, chromosome 3R, region 87D-87D, BAC clone
             BACR09O13, complete sequence
          Length = 174677

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 35    agtaactctacataaaaaatcaa 57
             ||||||||| |||||||||||||
Sbjct: 96107 agtaactcttcataaaaaatcaa 96129
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>gb|AC023115.6| Homo sapiens BAC clone RP11-269A16 from 2, complete sequence
          Length = 112289

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 43    tacataaaaaatcaactca 61
             |||||||||||||||||||
Sbjct: 92655 tacataaaaaatcaactca 92637
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>gb|AC079043.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-397e16, complete
              sequence
          Length = 214471

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      cacagacacagatgaaagc 22
              |||||||||||||||||||
Sbjct: 201378 cacagacacagatgaaagc 201396
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>gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone rp23-117j21, complete
              sequence
          Length = 215057

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      cacagacacagatgaaagc 22
              |||||||||||||||||||
Sbjct: 123742 cacagacacagatgaaagc 123724
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>gb|AE003697.4| Drosophila melanogaster chromosome 3R, section 35 of 118 of the complete
              sequence
          Length = 221239

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 35     agtaactctacataaaaaatcaa 57
              ||||||||| |||||||||||||
Sbjct: 107796 agtaactcttcataaaaaatcaa 107818
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>emb|AL021182.1|HSU19H10 Human DNA sequence from clone LL0XNC01-19H10 on chromosome X,
            complete sequence
          Length = 43303

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 33   acagtaactctacataaaa 51
            |||||||||||||||||||
Sbjct: 1332 acagtaactctacataaaa 1350
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>gb|AC087064.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-428i4, complete
             sequence
          Length = 211848

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     cacagacacagatgaaagc 22
             |||||||||||||||||||
Sbjct: 33397 cacagacacagatgaaagc 33379
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>dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371b,
             complete sequence
          Length = 67552

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 37    taactctacataaaaaatcaact 59
             ||||||||| |||||||||||||
Sbjct: 14360 taactctacctaaaaaatcaact 14382
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>gb|AC117682.11| Mus musculus chromosome 1, clone RP23-436K7, complete sequence
          Length = 212395

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 39    actctacataaaaaatcaactc 60
             |||||||| |||||||||||||
Sbjct: 94130 actctacacaaaaaatcaactc 94151
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>gb|AC117721.8| Mus musculus chromosome 1, clone RP24-196D2, complete sequence
          Length = 170426

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      cacagacacagatgaaag 21
              ||||||||||||||||||
Sbjct: 143575 cacagacacagatgaaag 143592
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>gb|AC011250.6| Drosophila melanogaster clone BACR21B19, complete sequence
          Length = 161692

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 37    taactctacataaaaaat 54
             ||||||||||||||||||
Sbjct: 59324 taactctacataaaaaat 59307
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>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8
              complete sequence
          Length = 350000

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     aaagctccatgatttaca 35
              ||||||||||||||||||
Sbjct: 185840 aaagctccatgatttaca 185857
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>gb|AC145690.4| Pan troglodytes BAC clone CH251-277H18 from X, complete sequence
          Length = 163776

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 44    acataaaaaatcaactca 61
             ||||||||||||||||||
Sbjct: 34685 acataaaaaatcaactca 34668
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>gb|AY814841.1| Schistosoma japonicum SJCHGC00439 protein mRNA, complete cds
          Length = 2087

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 43   tacataaaaaatcaactc 60
            ||||||||||||||||||
Sbjct: 1857 tacataaaaaatcaactc 1840
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>gb|AC147051.2| Mus musculus BAC clone RP23-90H22 from chromosome 8, complete sequence
          Length = 224213

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 2      gtcacagacacagatgaa 19
              ||||||||||||||||||
Sbjct: 210311 gtcacagacacagatgaa 210328
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>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence
          Length = 207139

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 4      cacagacacagatgaaag 21
              ||||||||||||||||||
Sbjct: 199042 cacagacacagatgaaag 199025
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>emb|CR974489.8| Mouse DNA sequence from clone RP23-78L13 on chromosome 12, complete
              sequence
          Length = 232346

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     aagctccatgatttacag 36
              ||||||||||||||||||
Sbjct: 170709 aagctccatgatttacag 170692
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>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence
          Length = 195911

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      cacagacacagatgaaag 21
              ||||||||||||||||||
Sbjct: 146157 cacagacacagatgaaag 146174
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>gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, complete sequence
          Length = 181020

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 44     acataaaaaatcaactca 61
              ||||||||||||||||||
Sbjct: 101860 acataaaaaatcaactca 101843
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>gb|AC127276.3| Mus musculus BAC clone RP24-221M17 from chromosome 8, complete sequence
          Length = 120935

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 2     gtcacagacacagatgaa 19
             ||||||||||||||||||
Sbjct: 72156 gtcacagacacagatgaa 72173
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>gb|U40412.1| Caenorhabditis elegans cosmid F46G11, complete sequence
          Length = 21731

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 18   aaagctccatgatttacagtaa 39
            ||||||| ||||||||||||||
Sbjct: 8076 aaagctcaatgatttacagtaa 8097
to top
>gb|AC113463.8| Mus musculus chromosome 1, clone RP23-40O18, complete sequence
          Length = 204466

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 39     actctacataaaaaatcaactc 60
              |||||||| |||||||||||||
Sbjct: 103821 actctacacaaaaaatcaactc 103842
to top
>emb|AL590410.13| Human DNA sequence from clone RP11-541G7 on chromosome X Contains the
             gene for APR-1 protein (MAGEH1), a novel gene, an
             ubiquitin specific protease 22 (USP22) pseudogene and a
             CpG island, complete sequence
          Length = 188615

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 44    acataaaaaatcaactca 61
             ||||||||||||||||||
Sbjct: 13300 acataaaaaatcaactca 13283
to top
>emb|AL590681.5| Human DNA sequence from clone RP11-163N15 on chromosome 13 Contains a
             ubiquitin-conjugating enzyme pseudogene, complete sequence
          Length = 58800

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 20    agctccatgatttacagtaact 41
             |||||||||||||||| |||||
Sbjct: 12415 agctccatgatttacaataact 12394
to top
>emb|AL512641.9| Human DNA sequence from clone RP11-139J15 on chromosome 10 Contains the
              5' end of a novel gene (LOC221078) (FLJ23743), two novel
              genes, the gene for ADP-ribosylation-like factor 8 (ARL8),
              a programmed cell death 8 (apoptosis-inducing factor)
              (PDCD8) pseudogene and a CpG island, complete sequence
          Length = 172688

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 44     acataaaaaatcaactca 61
              ||||||||||||||||||
Sbjct: 147792 acataaaaaatcaactca 147775
to top
>emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chromosome 6, complete
              sequence
          Length = 166517

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 44     acataaaaaatcaactca 61
              ||||||||||||||||||
Sbjct: 119768 acataaaaaatcaactca 119751
to top
>emb|AL355520.8| Human DNA sequence from clone RP4-595C2 on chromosome 1q24.1-25.3
              Contains the 3' end of the gene for Ral-A exchange factor
              RalGPS2 and the ANGPTL1 gene for angiopoietin-like 1,
              complete sequence
          Length = 157575

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 8      gacacagatgaaagctcc 25
              ||||||||||||||||||
Sbjct: 132144 gacacagatgaaagctcc 132127
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>emb|AL159986.22| Human DNA sequence from clone RP11-648N19 on chromosome 6, complete
              sequence
          Length = 137436

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 44     acataaaaaatcaactca 61
              ||||||||||||||||||
Sbjct: 118568 acataaaaaatcaactca 118551
to top
>emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chromosome 13 Contains the
             3' end of a novel gene, a guanidinoacetate
             N-methyltransferase (GAMT) pseudogene and a CpG island,
             complete sequence
          Length = 164345

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 47    taaaaaatcaactcacag 64
             ||||||||||||||||||
Sbjct: 92446 taaaaaatcaactcacag 92429
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>gb|AC158960.4| Mus musculus chromosome 1, clone RP23-315O2, complete sequence
          Length = 176947

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     cacagacacagatgaaag 21
             ||||||||||||||||||
Sbjct: 88009 cacagacacagatgaaag 87992
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>emb|CR628338.1| Legionella pneumophila str. Paris plasmid pLPP, complete sequence
          Length = 131885

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    gatgaaagctccatgatt 31
             ||||||||||||||||||
Sbjct: 40106 gatgaaagctccatgatt 40123
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>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12
          Length = 109155

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 46     ataaaaaatcaactcaca 63
              ||||||||||||||||||
Sbjct: 108266 ataaaaaatcaactcaca 108249
to top
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19
          Length = 95993

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 46    ataaaaaatcaactcaca 63
             ||||||||||||||||||
Sbjct: 14272 ataaaaaatcaactcaca 14255
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>gb|AC148449.2| Xenopus tropicalis clone CH216-118D6, complete sequence
          Length = 165682

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 26     atgatttacagtaactct 43
              ||||||||||||||||||
Sbjct: 128366 atgatttacagtaactct 128349
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>gb|AC099689.4| Homo sapiens chromosome 18, clone RP11-849I19, complete sequence
          Length = 201519

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      tcacagacacagatgaaa 20
              ||||||||||||||||||
Sbjct: 117483 tcacagacacagatgaaa 117500
to top
>gb|AC026320.25| Homo sapiens 3 BAC RP11-655G22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 172681

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 44   acataaaaaatcaactca 61
            ||||||||||||||||||
Sbjct: 7904 acataaaaaatcaactca 7887
to top
>gb|AC090377.15| Homo sapiens chromosome 18, clone RP11-866E20, complete sequence
          Length = 192704

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 47     taaaaaatcaactcacag 64
              ||||||||||||||||||
Sbjct: 188940 taaaaaatcaactcacag 188957
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>gb|AC135106.8| Pan troglodytes clone rp43-48a6, complete sequence
          Length = 181842

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 32    tacagtaactctacataaaaaa 53
             |||| |||||||||||||||||
Sbjct: 11081 tacaataactctacataaaaaa 11060
to top
>gb|AC138581.23| Pan troglodytes clone ptb-142b7, complete sequence
          Length = 199928

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 32    tacagtaactctacataaaaaa 53
             |||| |||||||||||||||||
Sbjct: 12799 tacaataactctacataaaaaa 12820
to top
>gb|AC107990.5| Homo sapiens chromosome 18, clone RP11-103A19, complete sequence
          Length = 166109

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 47    taaaaaatcaactcacag 64
             ||||||||||||||||||
Sbjct: 73020 taaaaaatcaactcacag 73037
to top
>gb|AC010915.8| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone
              BACR05L22, complete sequence
          Length = 137841

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 37     taactctacataaaaaat 54
              ||||||||||||||||||
Sbjct: 124898 taactctacataaaaaat 124881
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>gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, complete sequence
          Length = 193790

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 44     acataaaaaatcaactca 61
              ||||||||||||||||||
Sbjct: 164974 acataaaaaatcaactca 164957
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>emb|BX323865.6| Zebrafish DNA sequence from clone CH211-134N22 in linkage group 14,
             complete sequence
          Length = 75932

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     cacagacacagatgaaag 21
             ||||||||||||||||||
Sbjct: 38689 cacagacacagatgaaag 38672
to top
>emb|BX511032.6| Zebrafish DNA sequence from clone CH211-114B16 in linkage group 6,
              complete sequence
          Length = 183388

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 33     acagtaactctacataaa 50
              ||||||||||||||||||
Sbjct: 175443 acagtaactctacataaa 175426
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>gb|AC159297.3| Mus musculus BAC clone RP23-258F9 from chromosome 12, complete sequence
          Length = 193434

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     tcacagacacagatgaaa 20
             ||||||||||||||||||
Sbjct: 93111 tcacagacacagatgaaa 93094
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>dbj|AK081228.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030014I03
           product:unclassifiable, full insert sequence
          Length = 2474

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 18  aaagctccatgatttaca 35
           ||||||||||||||||||
Sbjct: 868 aaagctccatgatttaca 885
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>gb|AC006285.13| Homo sapiens chromosome 22 clone p1087l10 map 22q11, complete sequence
          Length = 150172

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 32     tacagtaactctacataaaaaa 53
              |||| |||||||||||||||||
Sbjct: 110815 tacaataactctacataaaaaa 110794
to top
>gb|AC016025.14| Homo sapiens chromosome 22 clone b342k14 map 22q11, complete sequence
          Length = 180269

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 32    tacagtaactctacataaaaaa 53
             |||| |||||||||||||||||
Sbjct: 66605 tacaataactctacataaaaaa 66584
to top
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 40      ctctacataaaaaatcaa 57
               ||||||||||||||||||
Sbjct: 1581033 ctctacataaaaaatcaa 1581050
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 10       cacagatgaaagctccat 27
                ||||||||||||||||||
Sbjct: 22396113 cacagatgaaagctccat 22396130
to top
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 44      acataaaaaatcaactca 61
               ||||||||||||||||||
Sbjct: 1820647 acataaaaaatcaactca 1820664
to top
>gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, complete sequence
          Length = 159692

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 40   ctctacataaaaaatcaactca 61
            ||||||||||| ||||||||||
Sbjct: 9114 ctctacataaacaatcaactca 9135
to top
>gb|AC084511.1|CBRG17D06 Caenorhabditis briggsae cosmid G17D06, complete sequence
          Length = 46394

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 40   ctctacataaaaaatcaa 57
            ||||||||||||||||||
Sbjct: 6920 ctctacataaaaaatcaa 6903
to top
>gb|AC078962.30| Homo sapiens 12 BAC RP11-338E21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162644

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 43    tacataaaaaatcaactc 60
             ||||||||||||||||||
Sbjct: 60874 tacataaaaaatcaactc 60891
to top
>gb|AC084073.22| Mus musculus strain C57BL/6J chromosome 1 clone rp23-85a8, complete
              sequence
          Length = 236834

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 39     actctacataaaaaatcaactc 60
              |||||||| |||||||||||||
Sbjct: 196600 actctacacaaaaaatcaactc 196621
to top
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    cacagatgaaagctccat 27
             ||||||||||||||||||
Sbjct: 93096 cacagatgaaagctccat 93113
to top
>dbj|AK106916.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A12, full
            insert sequence
          Length = 2809

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 10   cacagatgaaagctccat 27
            ||||||||||||||||||
Sbjct: 2096 cacagatgaaagctccat 2113
to top
>emb|AL365294.4|CNS05TF4 Human chromosome 14 DNA sequence BAC R-746E9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188478

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 41    tctacataaaaaatcaac 58
             ||||||||||||||||||
Sbjct: 89588 tctacataaaaaatcaac 89605
to top
>emb|BX323056.5| Zebrafish DNA sequence from clone DKEY-97O5 in linkage group 20, complete
              sequence
          Length = 134072

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 24     ccatgatttacagtaact 41
              ||||||||||||||||||
Sbjct: 105899 ccatgatttacagtaact 105882
to top
>gb|AC007452.1|AC007452 Drosophila melanogaster, chromosome 2R, region 50A1-50B1, P1 clones
              DS02357, DS05586, and BACR48I15, complete sequence
          Length = 146153

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 46     ataaaaaatcaactcaca 63
              ||||||||||||||||||
Sbjct: 116024 ataaaaaatcaactcaca 116007
to top
>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
              sequence
          Length = 291923

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 46     ataaaaaatcaactcaca 63
              ||||||||||||||||||
Sbjct: 118816 ataaaaaatcaactcaca 118833
to top
>gb|AE003845.4| Drosophila melanogaster chromosome 4, section 1 of 5 of the complete
              sequence
          Length = 173874

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 37     taactctacataaaaaat 54
              ||||||||||||||||||
Sbjct: 124898 taactctacataaaaaat 124881
to top
>gb|AC006256.1|AC006256 Homo sapiens chromosome 18, clone hRPK.12_J_19, complete sequence
          Length = 157803

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 41     tctacataaaaaatcaac 58
              ||||||||||||||||||
Sbjct: 131723 tctacataaaaaatcaac 131706
to top
>gb|AC005900.1|AC005900 Homo sapiens chromosome 17, clone hRPK.998_F_8, complete sequence
          Length = 175066

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 4      cacagacacagatgaaagctcc 25
              |||| |||||||||||||||||
Sbjct: 168677 cacacacacagatgaaagctcc 168698
to top
>gb|AC138552.3| Cercopithecus aethiops clone CH252-371N21, complete sequence
          Length = 173111

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 44     acataaaaaatcaactca 61
              ||||||||||||||||||
Sbjct: 168734 acataaaaaatcaactca 168751
to top
>gb|AC131774.4| Mus musculus BAC clone RP24-311P6 from 12, complete sequence
          Length = 150645

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 3    tcacagacacagatgaaa 20
            ||||||||||||||||||
Sbjct: 8501 tcacagacacagatgaaa 8484
to top
>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence
          Length = 154142

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    atgatttacagtaactct 43
             ||||||||||||||||||
Sbjct: 74304 atgatttacagtaactct 74287
to top
>emb|AL805924.5| Mouse DNA sequence from clone RP23-329M9 on chromosome X, complete
             sequence
          Length = 222134

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    aaagctccatgatttaca 35
             ||||||||||||||||||
Sbjct: 53504 aaagctccatgatttaca 53521


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 853,884
Number of Sequences: 3902068
Number of extensions: 853884
Number of successful extensions: 68739
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68554
Number of HSP's gapped (non-prelim): 185
length of query: 65
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 44
effective length of database: 17,151,101,840
effective search space: 754648480960
effective search space used: 754648480960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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