ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL935254.1| Lactobacillus plantarum strain WCFS1 complete ge... 46 0.10
2ref|XM_744152.1| Aspergillus fumigatus Af293 DNA helicase (Afu2g... 44 0.41
3gb|AC100043.9| Mus musculus chromosome 3, clone RP23-32D13, comp... 42 1.6
4gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 42 1.6
5gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 42 1.6
6gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 42 1.6
7gb|CP000001.1| Bacillus cereus E33L, complete genome 42 1.6
8emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D... 42 1.6
9emb|CR626902.14| Zebrafish DNA sequence from clone CH211-1F22 in... 42 1.6
10gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 42 1.6
11gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 42 1.6
12gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 6.4
13gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome ... 40 6.4
14gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genom... 40 6.4
15ref|NM_003708.2| Homo sapiens retinol dehydrogenase 16 (all-tran... 40 6.4
16gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.4
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.4
18gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete... 40 6.4
19gb|AC129315.3| Mus musculus BAC clone RP23-407E2 from chromosome... 40 6.4
20emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chr... 40 6.4
21emb|AL590244.5| Human DNA sequence from clone RP11-28H17 on chro... 40 6.4
22emb|AL031073.1|HS142F18 Human DNA sequence from clone RP1-142F18... 40 6.4
23emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 6.4
24gb|AC080005.24| Homo sapiens 3 BAC RP11-475N22 (Roswell Park Can... 40 6.4
25dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 6.4
26gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, com... 40 6.4
27gb|AC011139.8| Homo sapiens chromosome 18, clone RP11-1I2, compl... 40 6.4
28gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, com... 40 6.4
29gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 6.4
30gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 6.4
31gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 6.4
32ref|XM_392697.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 6.4
33dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
35gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromos... 40 6.4
36gb|AC078832.7| Staphylococcus aureus clone sabac-135, complete s... 40 6.4
37gb|AC020969.2|AC020969 Mus musculus chromosome 18 clone RP23-19K... 40 6.4
38dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 6.4
39dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 6.4
40dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
41emb|AJ563860.1|SAU563860 Staphylococcus aureus lysP gene for lys... 40 6.4
42emb|AJ563859.1|SAU563859 Staphylococcus aureus lysP gene for lys... 40 6.4
43emb|AJ563858.1|SAU563858 Staphylococcus aureus lysP gene for lys... 40 6.4
44emb|AJ563857.1|SAU563857 Staphylococcus aureus lysP gene for lys... 40 6.4
45emb|AJ563856.1|SAU563856 Staphylococcus aureus lysP gene for lys... 40 6.4
46emb|AJ563855.1|SAU563855 Staphylococcus aureus lysP gene for lys... 40 6.4
47emb|AJ563854.1|SAU563854 Staphylococcus aureus lysP gene for lys... 40 6.4
48emb|AJ563853.1|SAU563853 Staphylococcus aureus lysP gene for lys... 40 6.4
49emb|AJ563852.1|SAU563852 Staphylococcus aureus lysP gene for lys... 40 6.4
50emb|AJ563851.1|SAU563851 Staphylococcus aureus lysP gene for lys... 40 6.4
51emb|AJ563850.1|SAU563850 Staphylococcus aureus lysP gene for lys... 40 6.4
52emb|AJ563849.1|SAU563849 Staphylococcus aureus lysP gene for lys... 40 6.4
53emb|AJ563848.1|SAU563848 Staphylococcus aureus lysP gene for lys... 40 6.4
54emb|AJ563847.1|SAU563847 Staphylococcus aureus lysP gene for lys... 40 6.4
55emb|AJ563846.1|SAU563846 Staphylococcus aureus lysP gene for lys... 40 6.4
56emb|AJ563845.1|SAU563845 Staphylococcus aureus lysP gene for lys... 40 6.4
57emb|AJ563844.1|SAU563844 Staphylococcus aureus lysP gene for lys... 40 6.4
58emb|AJ563843.1|SAU563843 Staphylococcus aureus lysP gene for lys... 40 6.4
59emb|AJ563842.1|SAU563842 Staphylococcus aureus lysP gene for lys... 40 6.4
60emb|AJ563841.1|SAU563841 Staphylococcus aureus lysP gene for lys... 40 6.4
61emb|AJ563840.1|SAU563840 Staphylococcus aureus lysP gene for lys... 40 6.4
62emb|AJ563839.1|SAU563839 Staphylococcus aureus lysP gene for lys... 40 6.4
63emb|AJ563838.1|SAU563838 Staphylococcus aureus lysP gene for lys... 40 6.4
64emb|AJ563837.1|SAU563837 Staphylococcus aureus lysP gene for lys... 40 6.4
65emb|AJ563836.1|SAU563836 Staphylococcus aureus lysP gene for lys... 40 6.4
66emb|AJ563835.1|SAU563835 Staphylococcus aureus lysP gene for lys... 40 6.4
67emb|AJ563834.1|SAU563834 Staphylococcus aureus lysP gene for lys... 40 6.4
68emb|AJ563833.1|SAU563833 Staphylococcus aureus lysP gene for lys... 40 6.4
69emb|BX927188.11| Zebrafish DNA sequence from clone DKEY-264N13 i... 40 6.4
70gb|AF086735.1|AF086735 Homo sapiens retinol dehydrogenase mRNA, ... 40 6.4
71emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 40 6.4
72emb|AJ566753.1|SAU566753 Staphylococcus aureus lysP gene for lys... 40 6.4
73emb|AJ566752.1|SAU566752 Staphylococcus aureus lysP gene for lys... 40 6.4
74emb|AJ566751.1|SAU566751 Staphylococcus aureus lysP gene for lys... 40 6.4
75emb|AJ563962.1|SAU563962 Staphylococcus aureus lysP gene for lys... 40 6.4
76emb|AL591469.9| Mouse DNA sequence from clone RP23-390D17 on chr... 40 6.4
77emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chro... 40 6.4 
>emb|AL935254.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 3/11
          Length = 317050

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 101    gaaaatggctaaaatgtaaaacaacaa 127
              ||||||||||||||||||||| |||||
Sbjct: 262999 gaaaatggctaaaatgtaaaataacaa 262973
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>ref|XM_744152.1| Aspergillus fumigatus Af293 DNA helicase (Afu2g01090) partial mRNA
          Length = 2193

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 91  aaaccatagagaaaatggctaaaatg 116
           ||||||| ||||||||||||||||||
Sbjct: 605 aaaccatggagaaaatggctaaaatg 630
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>gb|AC100043.9| Mus musculus chromosome 3, clone RP23-32D13, complete sequence
          Length = 234931

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    gaaaatggctaaaatgtaaaa 121
              |||||||||||||||||||||
Sbjct: 101583 gaaaatggctaaaatgtaaaa 101603
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 210535 ttaattgttacatttcaattcttacaaaa 210507
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 206576 ttaattgttacatttcaattcttacaaaa 206548
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 206577 ttaattgttacatttcaattcttacaaaa 206549
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 207904 ttaattgttacatttcaattcttacaaaa 207876
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>emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D7 on chromosome 20 Contains part
             of a novel gene, complete sequence
          Length = 119790

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 215   cttattgttgagtttaaggag 235
             |||||||||||||||||||||
Sbjct: 26210 cttattgttgagtttaaggag 26230
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>emb|CR626902.14| Zebrafish DNA sequence from clone CH211-1F22 in linkage group 1,
            complete sequence
          Length = 130900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 110  taaaatgtaaaacaacaatcgtaaataca 138
            ||||||||||||||| | |||||||||||
Sbjct: 9148 taaaatgtaaaacaaaattcgtaaataca 9176
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 206576 ttaattgttacatttcaattcttacaaaa 206548
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 94     ccatagagaaaatggctaaaatgta 118
              ||||||| |||||||||||||||||
Sbjct: 181660 ccatagaaaaaatggctaaaatgta 181684
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      ctcaattattacaaaaccat 97
               ||||||||||||||||||||
Sbjct: 2151468 ctcaattattacaaaaccat 2151449
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>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence
          Length = 212628

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    ccttagcatgaacatgccac 431
              ||||||||||||||||||||
Sbjct: 124534 ccttagcatgaacatgccac 124553
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>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete
             sequence
          Length = 154558

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aaaatggctaaaatgtaaaa 121
             ||||||||||||||||||||
Sbjct: 47214 aaaatggctaaaatgtaaaa 47233
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>ref|NM_003708.2| Homo sapiens retinol dehydrogenase 16 (all-trans) (RDH16), mRNA
          Length = 2425

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 tacttagagcagagggtgtg 309
           ||||||||||||||||||||
Sbjct: 400 tacttagagcagagggtgtg 419
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     gagggtgtggatgatctcca 320
               ||||||||||||||||||||
Sbjct: 1738036 gagggtgtggatgatctcca 1738017
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 102      aaaatggctaaaatgtaaaa 121
                ||||||||||||||||||||
Sbjct: 23210733 aaaatggctaaaatgtaaaa 23210752
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>gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete sequence
          Length = 266344

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaacaacaatcgtaaataca 138
              ||||||||||||||||||||
Sbjct: 205041 aaacaacaatcgtaaataca 205022
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>gb|AC129315.3| Mus musculus BAC clone RP23-407E2 from chromosome 18, complete sequence
          Length = 183462

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 277   atggaatagagattacttagagca 300
             ||||||||||| ||||||||||||
Sbjct: 67121 atggaatagagtttacttagagca 67098
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>emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chromosome 1 Contains the
             5' end of the SLC9A1 gene for solute carrier family 9
             (sodium/hydrogen exchanger), isoform 1 (antiporter,
             Na+/H+, amiloride sensitive), a ribosomal protein L18a
             (RPL18A) pseudogene, a novel pseudogene (FLJ20420), a
             nucleophosmin (nucleolar phosphoprotein B23,
             numatrin)(NPM1) pseudogene, a mall nuclear
             ribonucleoprotein polypeptide E (SNRPE) pseudogene, a
             novel gene, the 5' end of a novel gene (KIAA1037) and a
             CpG island, complete sequence
          Length = 147052

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aaaatggctaaaatgtaaaa 121
             ||||||||||||||||||||
Sbjct: 81005 aaaatggctaaaatgtaaaa 81024
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>emb|AL590244.5| Human DNA sequence from clone RP11-28H17 on chromosome 6 Contains
            the 3' end of a novel gene, part of a novel gene,  a
            novel gene, cytochrome P450 pseudogene and the 3' end of
            the RHAG gene for Rhesus blood group-associated
            glycoprotein (RH50A), complete sequence
          Length = 133579

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   agaataggtgtatatcacct 65
            ||||||||||||||||||||
Sbjct: 1047 agaataggtgtatatcacct 1028
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>emb|AL031073.1|HS142F18 Human DNA sequence from clone RP1-142F18 on chromosome Xq26.3-27.2
              Contains the MAGEE1 gene for melanoma antigen, family E 1,
              a  melanoma antigen, family E 1(MAGEE1) pseudogene, and a
              CpG island, complete sequence
          Length = 141672

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aaaatggctaaaatgtaaaa 121
              ||||||||||||||||||||
Sbjct: 125817 aaaatggctaaaatgtaaaa 125836
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1731483 aaaatggctaaaatgtaaaa 1731502
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>gb|AC080005.24| Homo sapiens 3 BAC RP11-475N22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169583

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    ttattgttgagtttaaggag 235
              ||||||||||||||||||||
Sbjct: 107037 ttattgttgagtttaaggag 107056
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1789203 aaaatggctaaaatgtaaaa 1789222
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>gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, complete sequence
          Length = 151032

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ttattgttgagtttaaggag 235
              ||||||||||||||||||||
Sbjct: 105232 ttattgttgagtttaaggag 105213
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>gb|AC011139.8| Homo sapiens chromosome 18, clone RP11-1I2, complete sequence
          Length = 180360

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   ttattgttgagtttaaggag 235
             ||||||||||||||||||||
Sbjct: 14101 ttattgttgagtttaaggag 14082
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>gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, complete sequence
          Length = 177522

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    aaaatggctaaaatgtaaaa 121
              ||||||||||||||||||||
Sbjct: 157668 aaaatggctaaaatgtaaaa 157649
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1758503 aaaatggctaaaatgtaaaa 1758522
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1684543 aaaatggctaaaatgtaaaa 1684562
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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1781340 aaaatggctaaaatgtaaaa 1781359
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>ref|XM_392697.2| PREDICTED: Apis mellifera similar to ENSANGP00000020383
           (LOC409172), mRNA
          Length = 2190

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 ttgcaatcaagttgatgatc 258
           ||||||||||||||||||||
Sbjct: 413 ttgcaatcaagttgatgatc 394
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 6913160 aaaatggctaaaatgtaaaa 6913141
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 102      aaaatggctaaaatgtaaaa 121
                ||||||||||||||||||||
Sbjct: 23203761 aaaatggctaaaatgtaaaa 23203780
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>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete sequence
          Length = 159324

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaacaacaatcgtaaataca 138
              ||||||||||||||||||||
Sbjct: 148330 aaacaacaatcgtaaataca 148311
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>gb|AC078832.7| Staphylococcus aureus clone sabac-135, complete sequence
          Length = 44901

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aaaatggctaaaatgtaaaa 121
             ||||||||||||||||||||
Sbjct: 18348 aaaatggctaaaatgtaaaa 18367
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>gb|AC020969.2|AC020969 Mus musculus chromosome 18 clone RP23-19K11, complete sequence
          Length = 179771

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 277   atggaatagagattacttagagca 300
             ||||||||||| ||||||||||||
Sbjct: 82667 atggaatagagtttacttagagca 82690
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1751831 aaaatggctaaaatgtaaaa 1751850
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1712810 aaaatggctaaaatgtaaaa 1712829
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>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1043F11
          Length = 167137

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    aaaatggctaaaatgtaaaa 121
              ||||||||||||||||||||
Sbjct: 141055 aaaatggctaaaatgtaaaa 141036
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>emb|AJ563860.1|SAU563860 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH18037
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563859.1|SAU563859 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH18034
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563858.1|SAU563858 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH18000
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563857.1|SAU563857 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH11888
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563856.1|SAU563856 Staphylococcus aureus lysP gene for lysine specific permease,
           strain FranceDuf
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563855.1|SAU563855 Staphylococcus aureus lysP gene for lysine specific permease,
           strain LiverpoolAG
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563854.1|SAU563854 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Southampton23
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563853.1|SAU563853 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Sweden309
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563852.1|SAU563852 Staphylococcus aureus lysP gene for lysine specific permease,
           strain LIM1
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563851.1|SAU563851 Staphylococcus aureus lysP gene for lysine specific permease,
           strain LIM3
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563850.1|SAU563850 Staphylococcus aureus lysP gene for lysine specific permease,
           strain LIM2
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563849.1|SAU563849 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Glasgow3759
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563848.1|SAU563848 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Glasgow3700
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563847.1|SAU563847 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH2
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563846.1|SAU563846 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Norway1018
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563845.1|SAU563845 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Slovenia6096
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563844.1|SAU563844 Staphylococcus aureus lysP gene for lysine specific permease,
           strain PC1
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563843.1|SAU563843 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Sweden307
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563842.1|SAU563842 Staphylococcus aureus lysP gene for lysine specific permease,
           strain PC3
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563841.1|SAU563841 Staphylococcus aureus lysP gene for lysine specific permease,
           strain St Luke
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563840.1|SAU563840 Staphylococcus aureus lysP gene for lysine specific permease,
           strain New Jersey
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563839.1|SAU563839 Staphylococcus aureus lysP gene for lysine specific permease,
           strain LLA
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563838.1|SAU563838 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH14017
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563837.1|SAU563837 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH17487
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563836.1|SAU563836 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH17608
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563835.1|SAU563835 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH10507
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563834.1|SAU563834 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH8997
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563833.1|SAU563833 Staphylococcus aureus lysP gene for lysine specific permease,
           strain SMH12248
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|BX927188.11| Zebrafish DNA sequence from clone DKEY-264N13 in linkage group 19,
              complete sequence
          Length = 163213

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    gctaaaatgtaaaacaacaa 127
              ||||||||||||||||||||
Sbjct: 143019 gctaaaatgtaaaacaacaa 143000
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>gb|AF086735.1|AF086735 Homo sapiens retinol dehydrogenase mRNA, complete cds
          Length = 2425

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 tacttagagcagagggtgtg 309
           ||||||||||||||||||||
Sbjct: 400 tacttagagcagagggtgtg 419
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     aaaatggctaaaatgtaaaa 121
               ||||||||||||||||||||
Sbjct: 1823449 aaaatggctaaaatgtaaaa 1823468
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>emb|AJ566753.1|SAU566753 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Michigan
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ566752.1|SAU566752 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Mu3
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ566751.1|SAU566751 Staphylococcus aureus lysP gene for lysine specific permease,
           strain Mu50
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AJ563962.1|SAU563962 Staphylococcus aureus lysP gene for lysine specific permease,
           strain LLE
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaatggctaaaatgtaaaa 121
           ||||||||||||||||||||
Sbjct: 788 aaaatggctaaaatgtaaaa 769
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>emb|AL591469.9| Mouse DNA sequence from clone RP23-390D17 on chromosome 11, complete
             sequence
          Length = 168981

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ccatcttcccaaggatcacg 337
             ||||||||||||||||||||
Sbjct: 96421 ccatcttcccaaggatcacg 96440
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>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete
              sequence
          Length = 202500

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    ctccgtgagggtgctcccca 404
              ||||||||||||||||||||
Sbjct: 156227 ctccgtgagggtgctcccca 156208


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,274,425
Number of Sequences: 3902068
Number of extensions: 4274425
Number of successful extensions: 89924
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89363
Number of HSP's gapped (non-prelim): 561
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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