Clone Name | rbart37g09 |
---|---|
Clone Library Name | barley_pub |
>S26A1_MOUSE (P58735) Sulfate anion transporter 1 (SAT-1) (Solute carrier family| 26 member 1) Length = 704 Score = 30.4 bits (67), Expect = 1.4 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 32 GQIHRFYTSKLTGSILTGFTEPQTDGP 112 GQ+H + S++ G+I TGF PQ P Sbjct: 314 GQLHTRFDSRVAGNIPTGFVAPQVPDP 340
>S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute carrier family| 26 member 1) Length = 701 Score = 29.3 bits (64), Expect = 3.0 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 32 GQIHRFYTSKLTGSILTGFTEPQTDGP 112 GQ+H+ + S + G I TGF PQ P Sbjct: 309 GQLHKRFGSSVAGDIPTGFMPPQVPEP 335
>S26A1_RAT (P45380) Sulfate anion transporter 1 (SAT-1) (Solute carrier family| 26 member 1) (Canalicular sulfate transporter) (Sulfate/carbonate antiporter) Length = 703 Score = 28.9 bits (63), Expect = 3.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 32 GQIHRFYTSKLTGSILTGFTEPQTDGP 112 GQ+H + S + G+I TGF PQ P Sbjct: 313 GQLHTRFGSSVAGNIPTGFVAPQIPDP 339
>COOF_RHORU (P31894) Iron-sulfur protein| Length = 190 Score = 28.1 bits (61), Expect = 6.7 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -3 Query: 91 CETCEDRPCQFAC 53 C CED PC FAC Sbjct: 65 CRQCEDAPCTFAC 77
>PAFA2_HUMAN (Q99487) Platelet-activating factor acetylhydrolase 2, cytoplasmic| (EC 3.1.1.47) (Serine-dependent phospholipase A2) (HSD-PLA2) Length = 392 Score = 28.1 bits (61), Expect = 6.7 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +2 Query: 32 GQIHRFYT--SKLTGSILTGFTEPQTDGPIDPGNGMDSFIQSKL 157 G +HR T + +TG+++ F +T G +DP G + +++ L Sbjct: 311 GSVHRSQTDFAFVTGNLIGKFFSTETRGSLDPYEGQEVMVRAML 354
>TILS_PORPU (P51383) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 327 Score = 27.7 bits (60), Expect = 8.8 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 28 GGTNSQVLHKQIDRVDPHRFHRTTN*WTDRPWEWDGFIHSKQ 153 GG +S L K + ++P R T D W WD + SKQ Sbjct: 33 GGQDSLTLVKLLYDLNPFYRWRITLIHFDHRWRWDSMLASKQ 74 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,227,538 Number of Sequences: 219361 Number of extensions: 438648 Number of successful extensions: 1201 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1201 length of database: 80,573,946 effective HSP length: 35 effective length of database: 72,896,311 effective search space used: 1749511464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)