ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S26A1_MOUSE (P58735) Sulfate anion transporter 1 (SAT-1) (Solute... 30 1.4
2S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute... 29 3.0
3S26A1_RAT (P45380) Sulfate anion transporter 1 (SAT-1) (Solute c... 29 3.9
4COOF_RHORU (P31894) Iron-sulfur protein 28 6.7
5PAFA2_HUMAN (Q99487) Platelet-activating factor acetylhydrolase ... 28 6.7
6TILS_PORPU (P51383) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 28 8.8

>S26A1_MOUSE (P58735) Sulfate anion transporter 1 (SAT-1) (Solute carrier family|
           26 member 1)
          Length = 704

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 32  GQIHRFYTSKLTGSILTGFTEPQTDGP 112
           GQ+H  + S++ G+I TGF  PQ   P
Sbjct: 314 GQLHTRFDSRVAGNIPTGFVAPQVPDP 340



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>S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute carrier family|
           26 member 1)
          Length = 701

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 32  GQIHRFYTSKLTGSILTGFTEPQTDGP 112
           GQ+H+ + S + G I TGF  PQ   P
Sbjct: 309 GQLHKRFGSSVAGDIPTGFMPPQVPEP 335



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>S26A1_RAT (P45380) Sulfate anion transporter 1 (SAT-1) (Solute carrier family|
           26 member 1) (Canalicular sulfate transporter)
           (Sulfate/carbonate antiporter)
          Length = 703

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 32  GQIHRFYTSKLTGSILTGFTEPQTDGP 112
           GQ+H  + S + G+I TGF  PQ   P
Sbjct: 313 GQLHTRFGSSVAGNIPTGFVAPQIPDP 339



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>COOF_RHORU (P31894) Iron-sulfur protein|
          Length = 190

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 91  CETCEDRPCQFAC 53
           C  CED PC FAC
Sbjct: 65  CRQCEDAPCTFAC 77



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>PAFA2_HUMAN (Q99487) Platelet-activating factor acetylhydrolase 2, cytoplasmic|
           (EC 3.1.1.47) (Serine-dependent phospholipase A2)
           (HSD-PLA2)
          Length = 392

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 32  GQIHRFYT--SKLTGSILTGFTEPQTDGPIDPGNGMDSFIQSKL 157
           G +HR  T  + +TG+++  F   +T G +DP  G +  +++ L
Sbjct: 311 GSVHRSQTDFAFVTGNLIGKFFSTETRGSLDPYEGQEVMVRAML 354



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>TILS_PORPU (P51383) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 327

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 28  GGTNSQVLHKQIDRVDPHRFHRTTN*WTDRPWEWDGFIHSKQ 153
           GG +S  L K +  ++P    R T    D  W WD  + SKQ
Sbjct: 33  GGQDSLTLVKLLYDLNPFYRWRITLIHFDHRWRWDSMLASKQ 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,227,538
Number of Sequences: 219361
Number of extensions: 438648
Number of successful extensions: 1201
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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