>CAD23_RAT (P58365) Cadherin-23 precursor (Otocadherin)|
          Length = 3317

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -3

Query: 476  EEVLSSRTPGSSALHGAATWPDQGDVTSTLQYGLGQGDLFLDGYTYLED 330
            E VL   TPG++ +  AA  PD+G +   + Y L   DL   GY  LED
Sbjct: 2301 ERVLEGATPGTTLIAVAAVDPDKG-LNGLITYTL--LDLIPPGYVQLED 2346

>CAD23_HUMAN (Q9H251) Cadherin-23 precursor (Otocadherin)|
          Length = 3354

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -3

Query: 479  LEEVLSSRTPGSSALHGAATWPDQGDVTSTLQYGLGQGDLFLDGYTYLED 330
            +E +L   TPG++ +  AA  PD+G +   + Y L   DL   GY  LED
Sbjct: 2302 MERILEGATPGTTLIAVAAVDPDKG-LNGLVTYTL--LDLVPPGYVQLED 2348

>FLO1_YEAST (P32768) Flocculation protein FLO1 precursor (Flocculin-1)|
          Length = 1537

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
 Frame = -3

Query: 476  EEVLSSRTPGSSALHGAATWPDQGDVTST---LQYGLGQGDLFLDGYTYLEDFMPLPYGL 306
            E V+  RTP S  L    T P  G  TST   +    G   +  D  T +    P   GL
Sbjct: 892  ETVIVIRTPTSEGLISTTTEPWTGTFTSTSTEMTTVTGTNGVPTD-ETVIVIRTPTSEGL 950

Query: 305  DH*SAEPWVGRIDRLAPRVCKVYANNG 225
               + EPW G     +  V  +   NG
Sbjct: 951  ISTTTEPWTGTFTSTSTEVTTITGTNG 977

>CAD23_MOUSE (Q99PF4) Cadherin-23 precursor (Otocadherin)|
          Length = 3354

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -3

Query: 476  EEVLSSRTPGSSALHGAATWPDQGDVTSTLQYGLGQGDLFLDGYTYLED 330
            E VL   TPG++ +  AA  PD+G +   + Y L   DL   GY  LED
Sbjct: 2303 ERVLEGATPGTTLIAVAAVDPDKG-LNGLITYTL--LDLTPPGYVQLED 2348

>B3GT3_PONPY (Q5RAL7) Beta-1,3-galactosyltransferase 3 (EC 2.4.1.79)|
           (Beta-1,3-GalTase 3) (Beta3Gal-T3) (b3Gal-T3)
           (Galactosylgalactosylglucosylceramide
           beta-D-acetyl-galactosaminyltransferase)
           (UDP-N-acetylgalactosamine:globotriaosylceramide
           beta-1,3-N-a
          Length = 331

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -1

Query: 292 PSRGSGGSIGWLLAYVKYMQIMAAWILHLPELRVL--V*SVHFYVYVSCQLEICVFAIEL 119
           PSR S  S+ W L  +  +  +  W L LP   V+  V  ++FY Y     +   F +  
Sbjct: 10  PSRMSLRSLQWSLLLLSLLSFLVMWYLSLPHYNVIERVNWMYFYEYEPIYRQDFHFTLRE 69

Query: 118 HA 113
           H+
Sbjct: 70  HS 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,567,377
Number of Sequences: 219361
Number of extensions: 1539948
Number of successful extensions: 4220
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4201
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)