Clone Name | rbart37g06 |
---|---|
Clone Library Name | barley_pub |
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 270 bits (136), Expect = 4e-69 Identities = 251/290 (86%), Gaps = 17/290 (5%) Strand = Plus / Minus Query: 160 gcttcgatctgaaccaaacaacatgacgttcttcacatcatcgagacattc-------tg 212 ||||||||||||||||||||||| || ||||||||||||||||| |||||| || Sbjct: 932 gcttcgatctgaaccaaacaacaggatgttcttcacatcatcgaaacattcgtgagactg 873 Query: 213 accaccacgcacgcacttttttatgttgccgaaggcatcatggaaaccaaacaccgaacg 272 |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 872 cccaccacgtacgcacttttt-atgttgccgaaggcattatgga---------ccgaacg 823 Query: 273 acccttcacatggatggcttaatagtcgttgctggcgacgggggtgtggttgtcgcacat 332 || |||| ||||| ||||||| |||||||||| |||||||||| |||||| ||| ||||| Sbjct: 822 actcttcccatggctggcttagtagtcgttgccggcgacggggctgtggtcgtcccacat 763 Query: 333 gtacaggtaccggtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||| ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 762 gtataggtatcggtaaacgacgccggcgaggccaccgccgatgagcgggccggcccagta 703 Query: 393 gatccagatgttggtgaagtcgccgctggcaacggcggggccgaatgagc 442 | ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 702 aacccaaatgttggtgaagtcgccgctggcaacggcggggccgaaggagc 653 Score = 139 bits (70), Expect = 9e-30 Identities = 96/104 (92%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 37 tgttcttattgaatcgcataaggaaactcaactgaagaattctcaaaccccaacaacttc 96 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 1039 tgttcttattgaatcgcataaggaaactcaactgaaaaattctcaaaccccaccaacttc 980 Query: 97 acaacatcacattatattacagatagagaagcatgcatcatcca 140 ||||||||||||| ||||||||| || | ||||||||||||| Sbjct: 979 acaacatcacatt---ttacagataaaggaacatgcatcatcca 939
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 258 bits (130), Expect = 1e-65 Identities = 148/154 (96%) Strand = Plus / Minus Query: 289 gcttaatagtcgttgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtag 348 ||||| |||||||||| |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 800 gcttagtagtcgttgccggcgacggcggtgtggtcgtcgcacatgtacaggtaccggtag 741 Query: 349 acgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtg 408 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 acgacgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtg 681 Query: 409 aagtcgccgctggcaacggcggggccgaatgagc 442 ||||||||||||||||||||||||||||| |||| Sbjct: 680 aagtcgccgctggcaacggcggggccgaaggagc 647
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 238 bits (120), Expect = 1e-59 Identities = 141/148 (95%) Strand = Plus / Minus Query: 295 tagtcgttgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatg 354 |||||||||| |||||||| | |||||| |||||||||||||| |||||||||||||| | Sbjct: 797 tagtcgttgccggcgacggagctgtggtcgtcgcacatgtacacgtaccggtagacgacg 738 Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 678 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||||||||||||||||||||||| |||| Sbjct: 677 ccgctggcaacggcggggccgaaggagc 650
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 230 bits (116), Expect = 3e-57 Identities = 146/156 (93%) Strand = Plus / Minus Query: 287 tggcttaatagtcgttgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggt 346 ||||||| |||||||||| |||||||| | |||||| |||||||||||| ||||| |||| Sbjct: 806 tggcttagtagtcgttgccggcgacggagctgtggtcgtcgcacatgtataggtatcggt 747 Query: 347 agacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttgg 406 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 746 agacgacgccggcgaggccaccgccgatgagcgggccggcccagtagacccagatgttgg 687 Query: 407 tgaagtcgccgctggcaacggcggggccgaatgagc 442 ||||||||||||||||||||||||||||||| |||| Sbjct: 686 tgaagtcgccgctggcaacggcggggccgaaggagc 651
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 13251125 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 13251066 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 13251065 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 13251006 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 13251005 cgacggcggggccgaaggagc 13250985
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 12935 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 12876 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 12875 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 12816 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 12815 cgacggcggggccgaaggagc 12795
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 168313 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 168254 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 168253 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 168194 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 168193 cgacggcggggccgaaggagc 168173
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 825 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 766 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 765 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 706 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 705 cgacggcggggccgaaggagc 685
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 827 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 768 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 767 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 708 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 707 cgacggcggggccgaaggagc 687
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 828 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 769 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 768 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 709 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 708 cgacggcggggccgaaggagc 688
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 826 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 767 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 766 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 707 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 706 cgacggcggggccgaaggagc 686
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 828 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 769 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 768 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 709 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 708 cgacggcggggccgaaggagc 688
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 826 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 767 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 766 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 707 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 706 cgacggcggggccgaaggagc 686
>dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full insert sequence Length = 1196 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 827 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 768 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 767 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 708 Query: 422 caacggcggggccgaatgagc 442 | |||||||| ||||| |||| Sbjct: 707 cgacggcgggaccgaaggagc 687
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 302 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 361 ||||||| ||||||| ||||| | |||||||||| | ||| |||||||||| |||||||| Sbjct: 705 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaacggtagacgaggccggcga 646 Query: 362 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 421 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 645 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 586 Query: 422 caacggcggggccgaatgagc 442 | |||||||||||||| |||| Sbjct: 585 cgacggcggggccgaaggagc 565
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 69.9 bits (35), Expect = 7e-09 Identities = 85/99 (85%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 404 |||||||| ||| ||||| || |||||||||||||||||| ||||||||| |||| || Sbjct: 763 gtagacgaggccagcgagtccgccgccgatgagcgggccgacccagtagacccagttgcc 704 Query: 405 ggtgaagtc-gccgctggcaacggcggggccgaatgagc 442 || |||||| ||||| ||| |||||||||||||| |||| Sbjct: 703 ggcgaagtcggccgc-ggcgacggcggggccgaaggagc 666
>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA, complete cds Length = 1110 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 404 |||||||| ||| |||||||| ||||||| |||||||||| ||||||||| |||| | Sbjct: 920 gtagacgaggccagcgaggccgccgccgacgagcgggccgacccagtagacccagtttcc 861 Query: 405 ggtgaagtcgccgctggcaacggcggggccgaatgagc 442 || ||||||||| ||| |||||||||||||| |||| Sbjct: 860 ggcgaagtcgcccgcggcgacggcggggccgaaggagc 823
>gb|AY105015.1| Zea mays PCO137646 mRNA sequence Length = 1238 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 404 |||||||| ||| |||||||| ||||||| |||||||||| ||||||||| |||| | Sbjct: 919 gtagacgaggccagcgaggccgccgccgacgagcgggccgacccagtagacccagtttcc 860 Query: 405 ggtgaagtcgccgctggcaacggcggggccgaatgagc 442 || ||||||||| ||| |||||||||||||| |||| Sbjct: 859 ggcgaagtcgcccgcggcgacggcggggccgaaggagc 822
>emb|AJ005078.2|PAAJ5078 Picea abies mRNA for aquaporin-like protein Length = 1007 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 343 cggtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatg 402 ||||||||||| ||||| ||||| || |||||||| |||||| ||||||| | |||| || Sbjct: 775 cggtagacgataccggcaaggccgcctccgatgagggggccgacccagtacacccagttg 716 Query: 403 ttggtgaagtcgccgct 419 | ||||||||| ||||| Sbjct: 715 tcggtgaagtctccgct 699
>ref|XM_467137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 683 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 624 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||| ||| |||||||||||||| |||| Sbjct: 623 ccggcggcgacggcggggccgaaggagc 596
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 26627183 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 26627242 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||| ||| |||||||||||||| |||| Sbjct: 26627243 ccggcggcgacggcggggccgaaggagc 26627270
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 169564 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 169623 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||| ||| |||||||||||||| |||| Sbjct: 169624 ccggcggcgacggcggggccgaaggagc 169651
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 61344 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 61403 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||| ||| |||||||||||||| |||| Sbjct: 61404 ccggcggcgacggcggggccgaaggagc 61431
>dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mRNA for tonoplast intrinsic protein, complete cds Length = 1013 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 756 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 697 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||| ||| |||||||||||||| |||| Sbjct: 696 ccggcggcgacggcggggccgaaggagc 669
>dbj|AK064728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A10, full insert sequence Length = 873 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 558 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 499 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||| ||| |||||||||||||| |||| Sbjct: 498 ccggcggcgacggcggggccgaaggagc 471
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 414 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 250651 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 250592 Query: 415 ccgctggcaacggcggggccgaatgagc 442 ||| ||| |||||||||||||| |||| Sbjct: 250591 ccggcggcgacggcggggccgaaggagc 250564
>emb|AJ289866.2|VVI289866 Vitis vinifera mRNA for putative aquaporin (delta-TIP gene) Length = 1017 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 386 cccagtagatccagatgttggtgaagtcgccgctggcaacggcggggccgaatgagc 442 |||||||||||||| ||| |||||||||||||| | |||||||||||||| |||| Sbjct: 655 cccagtagatccagttgtccttgaagtcgccgctgacgacggcggggccgaaggagc 599
>gb|AF271661.1|AF271661 Vitis berlandieri x Vitis rupestris putative aquaporin TIP1 (TIP1) mRNA, complete cds Length = 1057 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 386 cccagtagatccagatgttggtgaagtcgccgctggcaacggcggggccgaatgagc 442 |||||||||||||| ||| |||||||||||||| | |||||||||||||| |||| Sbjct: 697 cccagtagatccagttgtccttgaagtcgccgctgacgacggcggggccgaaggagc 641
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 699 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 652
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 2544783 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 2544830 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 398 agatgttggtgaagtcgccgctg 420 ||||||||||||||||||||||| Sbjct: 15990586 agatgttggtgaagtcgccgctg 15990564
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 762 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 715
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 125311 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 125264
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 700 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 653
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 2544893 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 2544940 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 398 agatgttggtgaagtcgccgctg 420 ||||||||||||||||||||||| Sbjct: 15985120 agatgttggtgaagtcgccgctg 15985098
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 777 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 730
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 786 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 739
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 788 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 741
>dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full insert sequence Length = 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 312 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 265
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 784 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 737
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 795 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 748
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 793 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 746
>gb|L12257.1|SOYNODA Glycine max nodulin-26 mRNA, complete cds Length = 1047 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 ||||| |||||||| ||||||||||||||||||||| Sbjct: 788 ccacctccgatgagagggccggcccagtagatccag 753
>gb|AF290618.1|AF290618 Nicotiana glauca putative delta TIP (MIP2) mRNA, complete cds Length = 1072 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 382 ccggcccagtagatccagatgttggtgaagtcgccgctggc 422 ||||||||||| |||||| |||| ||||||||||| ||||| Sbjct: 719 ccggcccagtaaatccagttgttagtgaagtcgccactggc 679
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||| ||||||||||| || ||| ||||||| Sbjct: 796 gtagatgacgccggcgaggccgccgccgatgaggggcccgacccagta 749
>emb|AJ243309.1|PSA243309 Pisum sativum mRNA for putative tonoplast intrinsic protein (gene tip1-1) Length = 1104 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 ||||| ||||| || ||||||||||||||||||||| Sbjct: 755 ccaccaccgataagtgggccggcccagtagatccag 720
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 392 ||||| || |||||||||||| ||||||||||| || ||| ||||||| Sbjct: 792 gtagatgacgccggcgaggccgccgccgatgaggggcccgacccagta 745
>ref|XM_470886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 398 agatgttggtgaagtcgccgctg 420 ||||||||||||||||||||||| Sbjct: 877 agatgttggtgaagtcgccgctg 855
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 398 agatgttggtgaagtcgccgctg 420 ||||||||||||||||||||||| Sbjct: 59831 agatgttggtgaagtcgccgctg 59853
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 398 agatgttggtgaagtcgccgctg 420 ||||||||||||||||||||||| Sbjct: 106408 agatgttggtgaagtcgccgctg 106430
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 354 gccggcgaggccaccgccgatga 376 ||||||||||||||||||||||| Sbjct: 505313 gccggcgaggccaccgccgatga 505291 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gccggcgaggccaccgccga 373 |||||||||||||||||||| Sbjct: 1274146 gccggcgaggccaccgccga 1274165
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 398 agatgttggtgaagtcgccgctg 420 ||||||||||||||||||||||| Sbjct: 25620210 agatgttggtgaagtcgccgctg 25620232
>dbj|AK107457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-C11, full insert sequence Length = 1679 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 398 agatgttggtgaagtcgccgctg 420 ||||||||||||||||||||||| Sbjct: 794 agatgttggtgaagtcgccgctg 816
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Minus Query: 345 gtagacgatgccggcgaggccaccgccgatg 375 ||||| || |||||||||||||||||||||| Sbjct: 622 gtagatgacgccggcgaggccaccgccgatg 592
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 44.1 bits (22), Expect = 0.38 Identities = 67/82 (81%) Strand = Plus / Minus Query: 361 aggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctg 420 ||||||||||||| ||| |||||| ||||||| | |||| || || ||||| |||| Sbjct: 757 aggccaccgccgacgagggggccgacccagtacacccagttgccggcgaagttgccggcc 698 Query: 421 gcaacggcggggccgaatgagc 442 || |||||||||||||| |||| Sbjct: 697 gccacggcggggccgaaggagc 676
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 44.1 bits (22), Expect = 0.38 Identities = 67/82 (81%) Strand = Plus / Minus Query: 361 aggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctg 420 ||||||||||||| ||| |||||| ||||||| | |||| || || ||||| |||| Sbjct: 739 aggccaccgccgacgagggggccgacccagtacacccagttgccggcgaagttgccggcc 680 Query: 421 gcaacggcggggccgaatgagc 442 || |||||||||||||| |||| Sbjct: 679 gccacggcggggccgaaggagc 658
>gb|DQ226889.1| Boechera divaricarpa isolate SLW-D-E07 mRNA sequence Length = 980 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 355 ccggcgaggccaccgccgatgagcgggccggcccagtagatccag 399 ||||||| |||||||||| ||| || ||||||||||||| |||| Sbjct: 705 ccggcgattccaccgccgacgagaggtccggcccagtagacccag 661
>emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 in linkage group 7, complete sequence Length = 168673 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ttcacaacatcacattatatt 114 ||||||||||||||||||||| Sbjct: 78807 ttcacaacatcacattatatt 78827
>emb|Z29946.1|TRGTIPLP T.repens (Huia) mRNA for gamma-Tip-like protein Length = 991 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 gggccggcccagtagatccag 399 ||||||||||||||||||||| Sbjct: 655 gggccggcccagtagatccag 635
>ref|XM_236362.3| PREDICTED: Rattus norvegicus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (predicted) (Herc1_predicted), mRNA Length = 15132 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 37 tgttcttattgaatcgcataaggaaactc 65 |||||||||||| ||||||||||||||| Sbjct: 10797 tgttcttattgatgcgcataaggaaactc 10825
>ref|NM_129238.2| Arabidopsis thaliana GAMMA-TIP; water channel AT2G36830 (GAMMA-TIP) mRNA, complete cds Length = 1058 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 747 ccaccgccgacgagaggtccggcccagtagacccag 712
>gb|AC165149.5| Mus musculus BAC clone RP24-114C10 from chromosome 13, complete sequence Length = 191162 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ggaaactcaactgaagaatt 77 |||||||||||||||||||| Sbjct: 13923 ggaaactcaactgaagaatt 13942
>ref|NM_020416.2| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform (PPP2R2C), transcript variant 1, mRNA Length = 4117 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 3856 aaaccccaacaacttcacaa 3837
>ref|NM_181876.1| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform (PPP2R2C), transcript variant 2, mRNA Length = 4087 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 3826 aaaccccaacaacttcacaa 3807
>gb|AC121551.11| Mus musculus chromosome 1, clone RP24-144H23, complete sequence Length = 168683 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 ggaaactcaactgaagaatt 77 |||||||||||||||||||| Sbjct: 136133 ggaaactcaactgaagaatt 136114
>gb|AC147922.2| Xenopus tropicalis clone CH216-98P3, complete sequence Length = 171597 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ttcttattgaatcgcataag 58 |||||||||||||||||||| Sbjct: 92152 ttcttattgaatcgcataag 92171
>gb|AC006012.2| Homo sapiens PAC clone RP5-942I16 from 7, complete sequence Length = 121598 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ggcatcatggaaaccaaaca 265 |||||||||||||||||||| Sbjct: 113843 ggcatcatggaaaccaaaca 113824
>gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosome 6, complete sequence Length = 212735 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 57462 aaaccccaacaacttcacaa 57481
>emb|X63552.1|ATGTIPARA A.thaliana gene for tonoplast intrinsic protein gamma-TIP(Ara) Length = 1398 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 1132 ccaccgccgacgagaggtccggcccagtagacccag 1097
>gb|AY059134.1| Arabidopsis thaliana putative aquaporin (At2g36830) mRNA, complete cds Length = 787 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 683 ccaccgccgacgagaggtccggcccagtagacccag 648
>gb|AF370172.1| Arabidopsis thaliana putative tonoplast intrinsic protein gamma, aquaporin (At2g36830) mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 741 ccaccgccgacgagaggtccggcccagtagacccag 706
>emb|X54854.1|ATROOTSP A. thaliana mRNA for root-specific gene Length = 993 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 725 ccaccgccgacgagaggtccggcccagtagacccag 690
>gb|BC021735.2| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform, mRNA (cDNA clone IMAGE:4816112) Length = 1172 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 918 aaaccccaacaacttcacaa 899
>gb|BC045682.1| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform, mRNA (cDNA clone IMAGE:5300526) Length = 2161 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 1900 aaaccccaacaacttcacaa 1881
>emb|AJ314583.1|POC314583 Posidonia oceanica mRNA for putative tonoplast intrinsic protein (tip1 gene) Length = 1112 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 344 ggtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||||||||||| | | | |||| || |||||| |||||||||||||| Sbjct: 779 ggtagacgatgccggcgatggctgcaccgactagtgggccgacccagtagatccag 724
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gccggcgaggccaccgccga 373 |||||||||||||||||||| Sbjct: 4535021 gccggcgaggccaccgccga 4535040
>dbj|AK127386.1| Homo sapiens cDNA FLJ45468 fis, clone BRSTN2015788 Length = 1737 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 1499 aaaccccaacaacttcacaa 1480
>gb|AC068733.12| Homo sapiens chromosome 11, clone RP11-304C12, complete sequence Length = 191656 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 tctcaaaccccaacaacttcacaa 100 ||||||||||||||| |||||||| Sbjct: 107696 tctcaaaccccaacaccttcacaa 107719
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete sequence Length = 134151 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 7442 ccaccgccgacgagaggtccggcccagtagacccag 7407
>gb|AC073589.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-147E23, complete sequence Length = 222430 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 tctgaaccaaacaacatgac 186 |||||||||||||||||||| Sbjct: 111593 tctgaaccaaacaacatgac 111574
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cggcgaggccaccgccgatg 375 |||||||||||||||||||| Sbjct: 1656225 cggcgaggccaccgccgatg 1656206
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 361 aggccaccgccgatgagcgggccggcccagta 392 ||||||||||||| ||| |||||| ||||||| Sbjct: 680 aggccaccgccgacgagggggccgacccagta 649
>gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA, complete cds Length = 1042 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 361 aggccaccgccgatgagcgggccggcccagta 392 ||||||||||||| ||| |||||| ||||||| Sbjct: 748 aggccaccgccgacgagggggccgacccagta 717
>emb|BX819301.1|CNS0AA93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZE04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 996 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 722 ccaccgccgacgagaggtccggcccagtagacccag 687
>emb|BX819066.1|CNS0AA99 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1009 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 712 ccaccgccgacgagaggtccggcccagtagacccag 677
>emb|BX818765.1|CNS0AA8G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 950 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 727 ccaccgccgacgagaggtccggcccagtagacccag 692
>emb|BX819619.1|CNS0A8TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 728 ccaccgccgacgagaggtccggcccagtagacccag 693
>emb|BX819585.1|CNS0A8ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 728 ccaccgccgacgagaggtccggcccagtagacccag 693
>emb|BX819242.1|CNS0A8YI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZD01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 904 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 726 ccaccgccgacgagaggtccggcccagtagacccag 691
>emb|BX818836.1|CNS0A8V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 995 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 727 ccaccgccgacgagaggtccggcccagtagacccag 692
>emb|BX818785.1|CNS0A8WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 726 ccaccgccgacgagaggtccggcccagtagacccag 691
>emb|BX820166.1|CNS0A8IR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 718 ccaccgccgacgagaggtccggcccagtagacccag 683
>dbj|AB206106.1| Mimosa pudica tip2;1 mRNA for tonoplast intrinsic protein 2;1, complete cds Length = 1001 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 386 cccagtagatccagatgttggtgaagtc 413 |||||||||||||| |||||||||||| Sbjct: 707 cccagtagatccagtagttggtgaagtc 680
>gb|AC084327.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-367K14, complete sequence Length = 108667 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 32732 aaaccccaacaacttcacaa 32713
>gb|AC116317.4| Homo sapiens BAC clone RP11-1406H17 from 4, complete sequence Length = 160943 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aaaccccaacaacttcacaa 100 |||||||||||||||||||| Sbjct: 82311 aaaccccaacaacttcacaa 82330
>gb|AY087558.1| Arabidopsis thaliana clone 36633 mRNA, complete sequence Length = 1042 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 747 ccaccgccgacgagaggtccggcccagtagacccag 712
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence Length = 90348 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ccgccgatgagcgggccggc 386 |||||||||||||||||||| Sbjct: 7090 ccgccgatgagcgggccggc 7109
>dbj|AB126924.1| Prunus persica Pr-gTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 1143 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 ||||||||||| | || |||||||||||||||||| Sbjct: 783 ccaccgccgatcaaaggcccggcccagtagatccag 748
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 caccgccgatgagcgggccg 384 |||||||||||||||||||| Sbjct: 557849 caccgccgatgagcgggccg 557868
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 tctgaaccaaacaacatgac 186 |||||||||||||||||||| Sbjct: 1893522 tctgaaccaaacaacatgac 1893503
>gb|M84344.1|ATHGTIP Arabidopsis thaliana tonoplast intrinsic protein (gamma-TIP) gene, complete cds Length = 1398 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 364 ccaccgccgatgagcgggccggcccagtagatccag 399 |||||||||| ||| || ||||||||||||| |||| Sbjct: 1132 ccaccgccgacgagaggtccggcccagtagacccag 1097 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,618,389 Number of Sequences: 3902068 Number of extensions: 3618389 Number of successful extensions: 67796 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 67250 Number of HSP's gapped (non-prelim): 536 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)