ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 597 e-167
2gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 381 e-102
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 172 7e-40
4emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 172 7e-40
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 172 7e-40
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 172 7e-40
7dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 7e-40
8ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 167 4e-38
9gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 141 2e-30
10gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 141 2e-30
11gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 141 2e-30
12gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 141 2e-30
13gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 141 2e-30
14gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 141 2e-30
15gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 141 2e-30
16gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 141 2e-30
17gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 141 2e-30
18gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 141 2e-30
19gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 141 2e-30
20gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 141 2e-30
21gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 141 2e-30
22gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 141 2e-30
23gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 141 2e-30
24gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 139 1e-29
25gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 137 4e-29
26gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 135 2e-28
27gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 131 2e-27
28gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 125 1e-25
29ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
30gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 111 2e-21
31gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 111 2e-21
32gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 92 2e-15
33ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 90 8e-15
34ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 90 8e-15
35dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
36dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
37dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
38dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
39gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 82 2e-12
40gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 80 8e-12
41gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 72 2e-09
42gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 72 2e-09
43gb|AY103567.1| Zea mays PCO116252 mRNA sequence 54 4e-04
44gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 52 0.002
45gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.027
46ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
47dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
48dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
49dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
50dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
51gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA,... 46 0.11
52gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA,... 46 0.11
53dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2... 46 0.11
54ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.42
55dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
56dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 44 0.42
57dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
58dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
59dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
60emb|AJ871331.1| Nyctotherus ovalis partial gene for putative ala... 44 0.42
61emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, comple... 42 1.7
62emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 i... 42 1.7
63dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
64ref|XM_957023.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
65ref|XM_327547.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
66gb|AF220951.1|AF220951 Streptomyces antibioticus 8,8a-deoxyolean... 40 6.6
67emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.6
68gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 6.6
69gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 6.6
70gb|L09654.1|STMPKS3ORF Streptomyces antibioticus polyketide synt... 40 6.6

>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  597 bits (301), Expect = e-167
 Identities = 310/313 (99%)
 Strand = Plus / Minus

                                                                        
Query: 178  agctagctccggtgtaagcaagcaaggatagcacaaaagcatgaggtctcgacgacggac 237
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2727 agctagctccggtgtaagcaagcaaggatagcacaaaggcatgaggtctccacgacggac 2668

                                                                        
Query: 238  gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 2608

                                                                        
Query: 298  tcccgtgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggt 357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2607 tcccgtgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggt 2548

                                                                        
Query: 358  gcggttcttgagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccag 417
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2547 gcggttctttagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccag 2488

                                                                        
Query: 418  cttcgccccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgt 477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2487 cttcgccccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgt 2428

                         
Query: 478  gtcgtgctggccc 490
            |||||||||||||
Sbjct: 2427 gtcgtgctggccc 2415



 Score =  262 bits (132), Expect = 1e-66
 Identities = 148/153 (96%), Gaps = 4/153 (2%)
 Strand = Plus / Minus

                                                                        
Query: 13   ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 72
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 2837

                                                                        
Query: 73   agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcaccc----ttattgc 128
            |||||||||||||||||||||||||||||||||||||||||||||||||    |||||||
Sbjct: 2836 agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcacccttatttattgc 2777

                                             
Query: 129  cttaattatccatgcaccggcacaactctctgt 161
            ||||||||| |||||||||||||||||||||||
Sbjct: 2776 cttaattattcatgcaccggcacaactctctgt 2744



to top

>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score =  381 bits (192), Expect = e-102
 Identities = 228/240 (95%)
 Strand = Plus / Minus

                                                                       
Query: 247 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 306
           ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 906 tcagatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtg 847

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 846 gtcggaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttctt 787

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||| ||||||||  ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 786 gagccgcgggtccccgttcatggccaccacctgcttctcgatgccctccagcctcgcccc 727

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaaccgcctgaacgcctcctgcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 667



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 6    catcgacttcattattgggcaaaacaagggattttttctgcacacgacga 55
            ||||||||| |||||||||||||  |||||| |||||||| |||||||||
Sbjct: 1099 catcgactttattattgggcaaatgaagggaatttttctgtacacgacga 1050



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 88   ccgcatgccgatcagacccgtcgtgcacgcac-ccttattgcctta 132
            ||||||||||||| |||||||||||||| ||| | |||||||||||
Sbjct: 1045 ccgcatgccgatcggacccgtcgtgcacacacgcattattgcctta 1000



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  172 bits (87), Expect = 7e-40
 Identities = 204/243 (83%)
 Strand = Plus / Minus

                                                                            
Query: 244      agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 303
                |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 30026452 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30026393

                                                                            
Query: 304      gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggtt 363
                | |||||||||||||||||||||||||| |||| ||||| |||| |||||||   |||||
Sbjct: 30026392 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggtt 30026333

                                                                            
Query: 364      cttgagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgc 423
                |||| | || ||||||  ||||||||| || ||  |  |||||||  ||  ||||  |||
Sbjct: 30026332 cttgcggtgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgc 30026273

                                                                            
Query: 424      cccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtg 483
                 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 30026272 gccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcg 30026213

                   
Query: 484      ctg 486
                |||
Sbjct: 30026212 ctg 30026210



 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Minus

                                                                            
Query: 307      gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
                |||||||||||| ||||| ||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 27803047 gtcggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttctt 27802988

                                                                            
Query: 367      gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
                ||||  || |||   ||||||| ||||||||| |   |||||  || |||||    | | 
Sbjct: 27802987 gagccccgcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgct 27802928

                                                                            
Query: 427      gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
                |||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 27802927 gaaccgccggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctg 27802868



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                         
Query: 425      ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
                ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 27821505 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 27821449



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 247      tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27821686 tcagatggagatgctgttggggatgcccatggcggtgagccc 27821645



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                         
Query: 314      gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
                ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 27821616 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27821560



to top

>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  172 bits (87), Expect = 7e-40
 Identities = 204/243 (83%)
 Strand = Plus / Minus

                                                                        
Query: 244  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 303
            |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 2698 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2639

                                                                        
Query: 304  gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggtt 363
            | |||||||||||||||||||||||||| |||| ||||| |||| |||||||   |||||
Sbjct: 2638 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggtt 2579

                                                                        
Query: 364  cttgagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgc 423
            |||| | || ||||||  ||||||||| || ||  |  |||||||  ||  ||||  |||
Sbjct: 2578 cttgcggtgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgc 2519

                                                                        
Query: 424  cccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtg 483
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2518 gccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcg 2459

               
Query: 484  ctg 486
            |||
Sbjct: 2458 ctg 2456



to top

>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  172 bits (87), Expect = 7e-40
 Identities = 204/243 (83%)
 Strand = Plus / Plus

                                                                         
Query: 244   agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 303
             |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 81299 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 81358

                                                                         
Query: 304   gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggtt 363
             | |||||||||||||||||||||||||| |||| ||||| |||| |||||||   |||||
Sbjct: 81359 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggtt 81418

                                                                         
Query: 364   cttgagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgc 423
             |||| | || ||||||  ||||||||| || ||  |  |||||||  ||  ||||  |||
Sbjct: 81419 cttgcggtgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgc 81478

                                                                         
Query: 424   cccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtg 483
              ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 81479 gccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcg 81538

                
Query: 484   ctg 486
             |||
Sbjct: 81539 ctg 81541



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  172 bits (87), Expect = 7e-40
 Identities = 204/243 (83%)
 Strand = Plus / Minus

                                                                            
Query: 244      agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 303
                |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 30117874 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30117815

                                                                            
Query: 304      gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggtt 363
                | |||||||||||||||||||||||||| |||| ||||| |||| |||||||   |||||
Sbjct: 30117814 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggtt 30117755

                                                                            
Query: 364      cttgagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgc 423
                |||| | || ||||||  ||||||||| || ||  |  |||||||  ||  ||||  |||
Sbjct: 30117754 cttgcggtgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgc 30117695

                                                                            
Query: 424      cccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtg 483
                 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 30117694 gccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcg 30117635

                   
Query: 484      ctg 486
                |||
Sbjct: 30117634 ctg 30117632



 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Minus

                                                                            
Query: 307      gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
                |||||||||||| ||||| ||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 27894371 gtcggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttctt 27894312

                                                                            
Query: 367      gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
                ||||  || |||   ||||||| ||||||||| |   |||||  || |||||    | | 
Sbjct: 27894311 gagccccgcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgct 27894252

                                                                            
Query: 427      gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
                |||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 27894251 gaaccgccggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctg 27894192



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                         
Query: 425      ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
                ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 27912829 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 27912773



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 247      tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27913010 tcagatggagatgctgttggggatgcccatggcggtgagccc 27912969



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                         
Query: 314      gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
                ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 27912940 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27912884



to top

>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score =  172 bits (87), Expect = 7e-40
 Identities = 204/243 (83%)
 Strand = Plus / Minus

                                                                        
Query: 244  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 303
            |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 2731 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2672

                                                                        
Query: 304  gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggtt 363
            | |||||||||||||||||||||||||| |||| ||||| |||| |||||||   |||||
Sbjct: 2671 gaggtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggtt 2612

                                                                        
Query: 364  cttgagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgc 423
            |||| | || ||||||  ||||||||| || ||  |  |||||||  ||  ||||  |||
Sbjct: 2611 cttgcggtgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgc 2552

                                                                        
Query: 424  cccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtg 483
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2551 gccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcg 2492

               
Query: 484  ctg 486
            |||
Sbjct: 2491 ctg 2489



to top

>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  167 bits (84), Expect = 4e-38
 Identities = 201/240 (83%)
 Strand = Plus / Minus

                                                                        
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 306
            ||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || |
Sbjct: 2613 tcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgag 2554

                                                                        
Query: 307  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
            ||||||||||||||||||||||||| |||| ||||| |||| |||||||   ||||||||
Sbjct: 2553 gtcggaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttctt 2494

                                                                        
Query: 367  gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
            | | || ||||||  ||||||||| || ||  |  |||||||  ||  ||||  ||| ||
Sbjct: 2493 gcggtgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgcc 2434

                                                                        
Query: 427  gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 2433 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 2374



to top

>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 736 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 677

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 676 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 617

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 616 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 557

              
Query: 487 gcc 489
           |||
Sbjct: 556 gcc 554



to top

>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score =  141 bits (71), Expect = 2e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
           |||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttctt 672

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
           |||    ||||| | |||||||| || |||  |  |||||||  |   ||||  ||||||
Sbjct: 671 gagacttgggtcggcgttcatggtcatcacgcggctctcgatctcggtcagccgcgcccc 612

                                                                       
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 611 gaaccgccggaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctg 552

              
Query: 487 gcc 489
           |||
Sbjct: 551 gcc 549



to top

>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score =  139 bits (70), Expect = 1e-29
 Identities = 193/234 (82%)
 Strand = Plus / Minus

                                                                       
Query: 247 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 306
           ||||||||| |||||||| ||||||||| | |||||||||||  ||||    ||| ||||
Sbjct: 753 tcagatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtg 694

                                                                       
Query: 307 gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
            ||||||||||| |||||||||| |||||| |||||||||||||| ||| ||||||||  
Sbjct: 693 atcggaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggttcaa 634

                                                                       
Query: 367 gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
            |||||||||||   ||||||| |||||||||   |||||||  || | |||  | | | 
Sbjct: 633 cagctgcgggtcgtggttcatgcccaccaccttgctctcgatctccactagccgctcgct 574

                                                                 
Query: 427 gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtc 480
           ||||||||||||| ||||||| ||||||| |||||| |||||| ||||||||||
Sbjct: 573 gaaccgcttgaacacctccagggccttggggtccgaggtccactccggcgtgtc 520



to top

>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  137 bits (69), Expect = 4e-29
 Identities = 195/237 (82%)
 Strand = Plus / Minus

                                                                        
Query: 244  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 303
            |||| ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| |
Sbjct: 2660 agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 2601

                                                                        
Query: 304  gtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggtt 363
            ||||||||||||||| ||||||||||||||||| || ||||| ||||| ||| |||||||
Sbjct: 2600 gtggtcggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggtt 2541

                                                                        
Query: 364  cttgagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgc 423
            |||||||| ||||||   ||||||| |||||||||   |||||||  || |||||    |
Sbjct: 2540 cttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtc 2481

                                                                     
Query: 424  cccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtc 480
             | ||||||||||||| ||||||| ||||| | |||||| |||||| ||||||||||
Sbjct: 2480 gctgaaccgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 2424



to top

>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score =  135 bits (68), Expect = 2e-28
 Identities = 191/232 (82%)
 Strand = Plus / Minus

                                                                        
Query: 249  agatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggt 308
            ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| ||||||
Sbjct: 1084 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 1025

                                                                        
Query: 309  cggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttga 368
            |||||||||| ||||||||||||||||| || ||||| ||||| ||| ||||||||||||
Sbjct: 1024 cggaggtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttga 965

                                                                        
Query: 369  gctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgccccga 428
            ||| ||||||   ||||||| |||||||||   |||||||  || |||||    | | ||
Sbjct: 964  gctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctga 905

                                                                
Query: 429  accgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtc 480
            ||||||||||| ||||||| ||||| | |||||| |||||| ||||||||||
Sbjct: 904  accgcttgaacacctccagggcctttgggtccgaggtccactccggcgtgtc 853



to top

>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score =  131 bits (66), Expect = 2e-27
 Identities = 189/230 (82%)
 Strand = Plus / Plus

                                                                       
Query: 257 atgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggtcggaggtg 316
           |||||||| ||||||||| |||||||||| ||  ||||    ||| |||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

                                                                       
Query: 317 tttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagctgcggg 376
           || ||||||||||||||||| |||| ||||||||| ||| ||||||||   |||||||||
Sbjct: 61  ttagggtagagcagcatgtaggggagcttggccgggccgttgcggttcaacagctgcggg 120

                                                                       
Query: 377 tccgagttcatggccaccacctgcttctcgatgccctccagcttcgccccgaaccgcttg 436
           ||   ||||||| |||||||||   |||||||  || |||||  | | | ||||||||||
Sbjct: 121 tcgtggttcatgcccaccaccttgctctcgatctccaccagccgctcrctgaaccgcttg 180

                                                             
Query: 437 aacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
           ||| ||||||| ||||||| |||||| |||||| ||||||||||| ||||
Sbjct: 181 aacacctccagggccttggggtccgaggtccactccggcgtgtcgcgctg 230



to top

>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  125 bits (63), Expect = 1e-25
 Identities = 138/163 (84%)
 Strand = Plus / Minus

                                                                        
Query: 307  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
            |||||||||||| |||||||||||| |||| ||||||| |||||| ||| ||||||||||
Sbjct: 2562 gtcggaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggttctt 2503

                                                                        
Query: 367  gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
            |||  | ||||||| ||||||||  || ||  | ||||||||  |   ||||  ||| ||
Sbjct: 2502 gaggcgagggtccgcgttcatggtgacgacgcgtttctcgatctcggtcagccgcgcgcc 2443

                                                       
Query: 427  gaaccgcttgaacgcctccagcgccttggcgtccgacgtccac 469
            ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2442 gaaccgcttgaacgcctcctgcgccttggcgtccgacgtccac 2400



to top

>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Minus

                                                                        
Query: 307  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
            |||||||||||| ||||| ||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 2541 gtcggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttctt 2482

                                                                        
Query: 367  gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
            ||||  || |||   ||||||| ||||||||| |   |||||  || |||||    | | 
Sbjct: 2481 gagccccgcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgct 2422

                                                                        
Query: 427  gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
            |||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 2421 gaaccgccggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctg 2362



to top

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Minus

                                                                         
Query: 307   gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
             |||||||||||| ||||| ||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 47177 gtcggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttctt 47118

                                                                         
Query: 367   gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
             ||||  || |||   ||||||| ||||||||| |   |||||  || |||||    | | 
Sbjct: 47117 gagccccgcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgct 47058

                                                                         
Query: 427   gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
             |||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 47057 gaaccgccggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctg 46998



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 425   ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
             ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 65635 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 65579



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 247   tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
             ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 65816 tcagatggagatgctgttggggatgcccatggcggtgagccc 65775



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 314   gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
             ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 65746 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 65690



to top

>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Plus

                                                                         
Query: 307   gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
             |||||||||||| ||||| ||||||||||||||||||| ||| || ||  ||||||||||
Sbjct: 10846 gtcggaggtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttctt 10905

                                                                         
Query: 367   gagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgcccc 426
             ||||  || |||   ||||||| ||||||||| |   |||||  || |||||    | | 
Sbjct: 10906 gagccccgcgtcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgct 10965

                                                                         
Query: 427   gaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgctg 486
             |||||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 10966 gaaccgccggaacgcctccagcgccctggcgtccgacgtccacgccggcgtgtcgcgctg 11025



to top

>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                        
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgc 484
            ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| ||
Sbjct: 2583 ccgaacctcttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgc 2524

              
Query: 485  tg 486
            ||
Sbjct: 2523 tg 2522



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 239  tgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccc 289
            ||||||| ||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 2772 tgctcagctcagatggagacgctgttggggatgcccatggcggtgagcccc 2722



to top

>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
            ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 2265 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 2209



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2446 tcagatggagatgctgttggggatgcccatggcggtgagccc 2405



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
            ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 2376 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2320



to top

>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
            ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 2744 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 2688



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2925 tcagatggagatgctgttggggatgcccatggcggtgagccc 2884



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
            ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 2855 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2799



to top

>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
            ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1151 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 1095



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1332 tcagatggagatgctgttggggatgcccatggcggtgagccc 1291



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
            ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 1262 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1206



to top

>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
            ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 2416 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 2360



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2597 tcagatggagatgctgttggggatgcccatggcggtgagccc 2556



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
            ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 2527 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2471



to top

>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
            ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 2746 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 2690



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2927 tcagatggagatgctgttggggatgcccatggcggtgagccc 2886



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
            ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 2857 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2801



to top

>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                     
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
            ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1316 ccgaacctcttgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 1260



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1497 tcagatggagatgctgttggggatgcccatggcggtgagccc 1456



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
            ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 1427 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1371



to top

>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 425  ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcg 481
            ||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 2738 ccgaacctcctgaacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcg 2682



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagccc 288
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2919 tcagatggagatgctgttggggatgcccatggcggtgagccc 2878



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgagc 370
            ||||| ||||| ||||||||||| || | |||  |||||||| | ||||||||||||
Sbjct: 2849 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2793



to top

>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 109/132 (82%)
 Strand = Plus / Minus

                                                                        
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 306
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 2064 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 2005

                                                                        
Query: 307  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
            ||| |||||||| ||||||||||||||||| ||||||| ||| || ||| | | |||| |
Sbjct: 2004 gtcagaggtgttggggtagagcagcatgtaggggaactcggcggggccgttcctgttcct 1945

                        
Query: 367  gagctgcgggtc 378
             |||||||||||
Sbjct: 1944 cagctgcgggtc 1933



to top

>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                        
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 306
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 4662 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 4603

                                                                        
Query: 307  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
            ||| |||||||| || |||||||||||||| ||||||| ||| || ||| | | |||| |
Sbjct: 4602 gtcagaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcct 4543

                        
Query: 367  gagctgcgggtc 378
             |||||||||||
Sbjct: 4542 cagctgcgggtc 4531



to top

>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Minus

                                                                        
Query: 247  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 306
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 2595 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 2536

                                                                        
Query: 307  gtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctt 366
            ||| |||||||| || |||||||||||||| ||||||| ||| || ||| | | |||| |
Sbjct: 2535 gtcagaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcct 2476

                        
Query: 367  gagctgcgggtc 378
             |||||||||||
Sbjct: 2475 cagctgcgggtc 2464



to top

>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 434  ttgaacgcctccagcgccttggcgtccgacgtcca 468
            |||||||| ||||||||||||||||| ||||||||
Sbjct: 2710 ttgaacgcatccagcgccttggcgtctgacgtcca 2676



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 251  atggatatgctgttcgggatgcccctggcggtgagcccctcggcct 296
            ||||| |||||||| || |||||| |||| || |||||||||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagcccctcggcct 2851



to top

>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 435 tgaacgcctccagcgccttggcgtccgacgtcca 468
           ||||||| ||||||||| ||||||||||||||||
Sbjct: 176 tgaacgcgtccagcgccctggcgtccgacgtcca 143



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 251 atggatatgctgttcgggatgcccctggcggtgagcccctcg 292
           ||||| |||||||| || |||||| |||| ||||||||||||
Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagcccctcg 322



to top

>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 245  gatcagatggatatgctgttcgggatgcccctggcggtga 284
            ||||||||||| |||||||| ||||||||| |||| ||||
Sbjct: 1558 gatcagatggagatgctgttggggatgcccttggctgtga 1519



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 314  gtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttcttgag 369
            ||||| |||||||| |||||||| ||||| || || |||||  | |||||||||||
Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431



to top

>ref|XM_483279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3198

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 246  atcagatggatatgctgttcgggatgcccctggcggtga 284
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2978 atcagatggatgtgctgttggggatgcccatgccggtga 2940



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 246      atcagatggatatgctgttcgggatgcccctggcggtga 284
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25242576 atcagatggatgtgctgttggggatgcccatgccggtga 25242538



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 246      atcagatggatatgctgttcgggatgcccctggcggtga 284
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25209453 atcagatggatgtgctgttggggatgcccatgccggtga 25209491



to top

>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 246    atcagatggatatgctgttcgggatgcccctggcggtga 284
              ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 107699 atcagatggatgtgctgttggggatgcccatgccggtga 107661



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 246   atcagatggatatgctgttcgggatgcccctggcggtga 284
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 74576 atcagatggatgtgctgttggggatgcccatgccggtga 74614



to top

>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 246   atcagatggatatgctgttcgggatgcccctggcggtga 284
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 17761 atcagatggatgtgctgttggggatgcccatgccggtga 17723



to top

>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full
            insert sequence
          Length = 3196

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 246  atcagatggatatgctgttcgggatgcccctggcggtga 284
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2976 atcagatggatgtgctgttggggatgcccatgccggtga 2938



to top

>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds
          Length = 2232

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 246  atcagatggatatgctgttcgggatgcccctggcggtga 284
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2053 atcagatggatgtgctgttggggatgcccatgccggtga 2015



to top

>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds
          Length = 2664

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 246  atcagatggatatgctgttcgggatgcccctggcggtga 284
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2461 atcagatggatgtgctgttggggatgcccatgccggtga 2423



to top

>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for
            lipoxygenase, complete cds
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 246  atcagatggatatgctgttcgggatgcccctggcggtga 284
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2891 atcagatggatgtgctgttggggatgcccatgccggtga 2853



to top

>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 247  tcagatggatatgctgttcgggatgcccct 276
            ||||||||| |||||||| |||||||||||
Sbjct: 2881 tcagatggagatgctgtttgggatgcccct 2852



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 247     tcagatggatatgctgttcgggatgcccct 276
               ||||||||| |||||||| |||||||||||
Sbjct: 5276963 tcagatggagatgctgtttgggatgcccct 5276992



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 457      gtccgacgtccacgccggcgtgtcgtgctggcc 489
                |||| |||||||| ||||||||||| |||||||
Sbjct: 11576458 gtccaacgtccactccggcgtgtcgcgctggcc 11576490



to top

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 376    gtccgagttcatggccaccacctgct 401
              ||||| ||||||||||||||||||||
Sbjct: 734989 gtccgggttcatggccaccacctgct 735014



to top

>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 247  tcagatggatatgctgttcgggatgcccct 276
            ||||||||| |||||||| |||||||||||
Sbjct: 3266 tcagatggagatgctgtttgggatgcccct 3295



to top

>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 247  tcagatggatatgctgttcgggatgcccct 276
            ||||||||| |||||||| |||||||||||
Sbjct: 2880 tcagatggagatgctgtttgggatgcccct 2851



to top

>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 247  tcagatggatatgctgttcgggatgcccct 276
            ||||||||| |||||||| |||||||||||
Sbjct: 2042 tcagatggagatgctgtttgggatgcccct 2013



to top

>emb|AJ871331.1| Nyctotherus ovalis partial gene for putative alanine
           aminotransferase precursor
          Length = 1186

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 427 gaaccgcttgaacgcctccagcgcct 452
           ||||| ||||||||||||||||||||
Sbjct: 124 gaacctcttgaacgcctccagcgcct 149



to top

>emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, complete sequence
          Length = 37711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    aaacaagggattttttctgca 47
             |||||||||||||||||||||
Sbjct: 32565 aaacaagggattttttctgca 32585



to top

>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24,
             complete sequence
          Length = 155584

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    gcaaaacaagggattttttct 44
             |||||||||||||||||||||
Sbjct: 39634 gcaaaacaagggattttttct 39614



to top

>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0010K08
          Length = 184760

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 457   gtccgacgtccacgccggcgtgtcgtgctggcc 489
             |||| |||||||| ||||||||||| |||||||
Sbjct: 22747 gtccaacgtccactccggcgtgtcgcgctggcc 22779



to top

>ref|XM_957023.1| Neurospora crassa OR74A hypothetical protein (NCU07262.1) partial
            mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  cgccccgaaccgcttgaacg 440
            ||||||||||||||||||||
Sbjct: 1660 cgccccgaaccgcttgaacg 1641



to top

>ref|XM_327547.1| Neurospora crassa OR74A hypothetical protein (NCU07262.1) partial
            mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  cgccccgaaccgcttgaacg 440
            ||||||||||||||||||||
Sbjct: 1660 cgccccgaaccgcttgaacg 1641



to top

>gb|AF220951.1|AF220951 Streptomyces antibioticus 8,8a-deoxyoleandolide synthase 1 (oleAI) and
             8,8a-deoxyoleandolide synthase 2 (oleAII) genes, complete
             cds
          Length = 24568

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 456   cgtccgacgtccacgccggcgtgt 479
             |||||||||||||||||| |||||
Sbjct: 24527 cgtccgacgtccacgccgccgtgt 24504



to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 433     cttgaacgcctccagcgcct 452
               ||||||||||||||||||||
Sbjct: 5508135 cttgaacgcctccagcgcct 5508154



to top

>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 245 gatcagatggatatgctgttcgggatgcccct 276
           ||||||||||| |||||| | |||||||||||
Sbjct: 132 gatcagatggagatgctgctggggatgcccct 163



to top

>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  gatcagatggatatgctgttcgggatgcccct 276
            ||||||||||| |||||| | |||||||||||
Sbjct: 1216 gatcagatggagatgctgctggggatgcccct 1185



to top

>gb|L09654.1|STMPKS3ORF Streptomyces antibioticus polyketide synthase gene, complete cds of
           ORF3 subunit including module 5 and module 6
          Length = 11480

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 456 cgtccgacgtccacgccggcgtgt 479
           |||||||||||||||||| |||||
Sbjct: 709 cgtccgacgtccacgccgccgtgt 686


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,828,439
Number of Sequences: 3902068
Number of extensions: 2828439
Number of successful extensions: 54927
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54573
Number of HSP's gapped (non-prelim): 352
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top