Clone Name | rbart37g03 |
---|---|
Clone Library Name | barley_pub |
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 117 bits (294), Expect(2) = 3e-28 Identities = 56/66 (84%), Positives = 62/66 (93%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DL++KFA+GVSMVASLSLAISYP +AA PHMF+N YKNVLAVA+ETDYSY HADKIKEYL Sbjct: 212 DLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYL 271 Query: 310 KDPSKF 293 KDPSKF Sbjct: 272 KDPSKF 277 Score = 26.2 bits (56), Expect(2) = 3e-28 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = -1 Query: 203 SDGEMGFSLFDD 168 SD EMGFSLFDD Sbjct: 307 SDEEMGFSLFDD 318
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 119 bits (299), Expect(2) = 1e-27 Identities = 58/66 (87%), Positives = 63/66 (95%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DLM+KFASGVSMVAS+SLAISYP +AAAPHMFLN YKNVLAVA+ET+YSY HADKIKEYL Sbjct: 212 DLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYL 271 Query: 310 KDPSKF 293 KDPSKF Sbjct: 272 KDPSKF 277 Score = 22.3 bits (46), Expect(2) = 1e-27 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SDG++G SLFD Sbjct: 308 SDGDLGMSLFD 318
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 112 bits (281), Expect(2) = 9e-26 Identities = 54/66 (81%), Positives = 61/66 (92%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DL+ KFA+GVSMV SLSLAISYP +AAAPHMF+NAYKNVLAVA+ETDYS+ ADK+KEYL Sbjct: 213 DLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYL 272 Query: 310 KDPSKF 293 KDPSKF Sbjct: 273 KDPSKF 278 Score = 23.1 bits (48), Expect(2) = 9e-26 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGFSLFD Sbjct: 310 SDDDMGFSLFD 320
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 104 bits (259), Expect(2) = 6e-23 Identities = 48/66 (72%), Positives = 60/66 (90%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DL++KFA+GVSM+ +LSLAISYP +AAAPHMFLNAYKNVLAVAL T+YS+ A+ +KE+L Sbjct: 213 DLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFL 272 Query: 310 KDPSKF 293 KDP+KF Sbjct: 273 KDPTKF 278 Score = 21.9 bits (45), Expect(2) = 6e-23 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = -1 Query: 203 SDGEMGFSLF 174 SDG+MGF LF Sbjct: 307 SDGDMGFDLF 316
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 102 bits (255), Expect = 4e-22 Identities = 45/65 (69%), Positives = 59/65 (90%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L++KFASG+SMV SL+LA+SYP +AAAPHMF+NAYKN LA+A+ T+Y++ A+K+KEYLK Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLK 272 Query: 307 DPSKF 293 DPSKF Sbjct: 273 DPSKF 277
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 102 bits (255), Expect = 4e-22 Identities = 45/65 (69%), Positives = 59/65 (90%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L++KFASG+SMV SL+LA+SYP +AAAPHMF+NAYKN LA+A+ TDY++ A+K+KE+LK Sbjct: 213 LVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLK 272 Query: 307 DPSKF 293 DPSKF Sbjct: 273 DPSKF 277
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 81.6 bits (200), Expect(2) = 1e-16 Identities = 39/66 (59%), Positives = 50/66 (75%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DL++KFA GVS + P +AAPH+F+NAYKNVLAVA+ T+YS+ AD++KEYL Sbjct: 213 DLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYL 272 Query: 310 KDPSKF 293 KDPSKF Sbjct: 273 KDPSKF 278 Score = 23.5 bits (49), Expect(2) = 1e-16 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = -1 Query: 203 SDGEMGFSLFDD 168 SD EMGF LFD+ Sbjct: 311 SDDEMGFGLFDE 322
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 74.7 bits (182), Expect = 1e-13 Identities = 34/65 (52%), Positives = 45/65 (69%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV +AS+ L I YP +A+ PH +N YK VL VA+ETDYS+ ADK+K +L Sbjct: 211 LHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLA 270 Query: 307 DPSKF 293 DPS+F Sbjct: 271 DPSRF 275
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 73.2 bits (178), Expect(2) = 1e-13 Identities = 34/65 (52%), Positives = 45/65 (69%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV +AS+ L I YP +A+ PH +N YK VLA+A+ETDYS+ ADK+K +L Sbjct: 211 LRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLA 270 Query: 307 DPSKF 293 DPS F Sbjct: 271 DPSAF 275 Score = 21.6 bits (44), Expect(2) = 1e-13 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 305 SDDDMGFGLFD 315
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 72.4 bits (176), Expect(2) = 3e-13 Identities = 34/65 (52%), Positives = 45/65 (69%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV VAS+ L I YP +A+ PH +N YK VLAVA+ETDY++ A+K+K +L Sbjct: 211 LHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLA 270 Query: 307 DPSKF 293 DPS F Sbjct: 271 DPSAF 275 Score = 21.2 bits (43), Expect(2) = 3e-13 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 306 SDEDMGFGLFD 316
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 72.8 bits (177), Expect = 5e-13 Identities = 33/66 (50%), Positives = 47/66 (71%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DL KF +GV+ +A++SL I YP +A+APH N +KN+LA+A T+ + A IKE++ Sbjct: 210 DLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEFI 269 Query: 310 KDPSKF 293 KDPSKF Sbjct: 270 KDPSKF 275
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 72.4 bits (176), Expect = 6e-13 Identities = 32/66 (48%), Positives = 46/66 (69%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DL KF GV+ +A++ L++ YP +A+APH N +KN+LA+A T+ + A IKEY+ Sbjct: 210 DLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEYI 269 Query: 310 KDPSKF 293 KDPSKF Sbjct: 270 KDPSKF 275
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 71.2 bits (173), Expect(2) = 7e-13 Identities = 32/65 (49%), Positives = 44/65 (67%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV +AS+ L I YP +A+ PH +N YK VLAV +ETDY++ A+K+K YL Sbjct: 214 LHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLA 273 Query: 307 DPSKF 293 DP+ F Sbjct: 274 DPTAF 278 Score = 21.2 bits (43), Expect(2) = 7e-13 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 309 SDEDMGFGLFD 319
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 70.9 bits (172), Expect(2) = 9e-13 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV VAS+ L I YP +A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270 Query: 307 DPSKF 293 DPS F Sbjct: 271 DPSAF 275 Score = 21.2 bits (43), Expect(2) = 9e-13 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 307 SDEDMGFGLFD 317
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 70.9 bits (172), Expect(2) = 9e-13 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV VAS+ L I YP +A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 202 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 261 Query: 307 DPSKF 293 DPS F Sbjct: 262 DPSAF 266 Score = 21.2 bits (43), Expect(2) = 9e-13 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 299 SDEDMGFGLFD 309
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 70.5 bits (171), Expect(2) = 1e-12 Identities = 32/65 (49%), Positives = 45/65 (69%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV VAS+ L I YP +A+ PH +N YK VLA+++ETDY++ A+K+K +L Sbjct: 211 LHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 270 Query: 307 DPSKF 293 DPS F Sbjct: 271 DPSAF 275 Score = 21.2 bits (43), Expect(2) = 1e-12 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 307 SDEDMGFGLFD 317
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 67.8 bits (164), Expect(2) = 7e-12 Identities = 30/65 (46%), Positives = 44/65 (67%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L +F GV VAS+ L I YP +A+ PH +N YK VLA+++ET+Y++ +K+K +L Sbjct: 211 LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVKAFLA 270 Query: 307 DPSKF 293 DPS F Sbjct: 271 DPSAF 275 Score = 21.2 bits (43), Expect(2) = 7e-12 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 307 SDEDMGFGLFD 317
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 65.9 bits (159), Expect(2) = 2e-11 Identities = 31/66 (46%), Positives = 44/66 (66%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 +L +F SGV VAS+SLA++YP +A+ H N +N+L VA TD S+ A+ IK ++ Sbjct: 209 ELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFI 268 Query: 310 KDPSKF 293 DPSKF Sbjct: 269 ADPSKF 274 Score = 21.6 bits (44), Expect(2) = 2e-11 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 301 SDDDMGFGLFD 311
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 65.9 bits (159), Expect = 6e-11 Identities = 27/57 (47%), Positives = 43/57 (75%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 320 DL++KF G+ +A++SL I YP +A+ PH +NA+KN+LA++ ET Y++D A+K K Sbjct: 206 DLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 60.1 bits (144), Expect(2) = 1e-09 Identities = 25/66 (37%), Positives = 44/66 (66%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 DL+ S S++ ++SL +YP + + H +NAYKN++AV+L T+Y+++ ++ K +L Sbjct: 208 DLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTKAFL 267 Query: 310 KDPSKF 293 DPS F Sbjct: 268 ADPSAF 273 Score = 21.2 bits (43), Expect(2) = 1e-09 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 302 SDEDMGFGLFD 312
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 56.2 bits (134), Expect(2) = 2e-09 Identities = 23/65 (35%), Positives = 43/65 (66%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 +++ FA+G + VA++S A+ P AAAPH L A++N A+ L+T + + ++KE ++ Sbjct: 210 ILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLKEMVE 269 Query: 307 DPSKF 293 +P+ F Sbjct: 270 NPAAF 274 Score = 24.3 bits (51), Expect(2) = 2e-09 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1 Query: 200 DGEMGFSLFD 171 DG+MGFSLFD Sbjct: 305 DGDMGFSLFD 314
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 58.5 bits (140), Expect(2) = 3e-09 Identities = 25/66 (37%), Positives = 42/66 (63%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 +L+ F S VS +AS+SLAI YP + + H +N YK++LAVA+ Y Y + + + + Sbjct: 208 ELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLVDRI 267 Query: 310 KDPSKF 293 ++P K+ Sbjct: 268 ENPEKY 273 Score = 21.6 bits (44), Expect(2) = 3e-09 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -1 Query: 203 SDGEMGFSLFD 171 SD +MGF LFD Sbjct: 302 SDDDMGFGLFD 312
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 58.5 bits (140), Expect = 9e-09 Identities = 24/65 (36%), Positives = 46/65 (70%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L+ F++ ++ +ASLSLA+++P + + H +NAYK VLAVA+ET+ S+ +++K+ + Sbjct: 209 LLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIA 268 Query: 307 DPSKF 293 +P + Sbjct: 269 NPEAY 273
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 57.4 bits (137), Expect = 2e-08 Identities = 24/66 (36%), Positives = 47/66 (71%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYL 311 D+++KF+ GVS VA+LS A A+ PH+F+ A+KN++A+ +++DY++ +K+++ Sbjct: 210 DILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKWV 269 Query: 310 KDPSKF 293 ++P F Sbjct: 270 ENPEAF 275
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 56.6 bits (135), Expect = 4e-08 Identities = 22/65 (33%), Positives = 46/65 (70%) Frame = -2 Query: 487 LMDKFASGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEYLK 308 L+ F+S ++ +A++SLA+++P + + H +N+YK VLAVA+ET+ S+ +++K+ + Sbjct: 209 LLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELKDRIA 268 Query: 307 DPSKF 293 +P + Sbjct: 269 NPEAY 273
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/30 (76%), Positives = 27/30 (90%) Frame = -2 Query: 490 DLMDKFASGVSMVASLSLAISYPPMAAAPH 401 DL+ +FA+GVSMV SLSLAISYP +AAAPH Sbjct: 213 DLLARFATGVSMVTSLSLAISYPTLAAAPH 242
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = -2 Query: 490 DLMDKFA-SGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYDHAD 329 D+++K+ G+S VA+LSL P A PHM ++A+K +L ++ T+Y +D D Sbjct: 216 DVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 36.6 bits (83), Expect = 0.038 Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -2 Query: 490 DLMDKFA-SGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYD 338 D+++K G+S VA+++L P + M ++A+KN+LAV++ T Y ++ Sbjct: 215 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 266
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 36.6 bits (83), Expect = 0.038 Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -2 Query: 490 DLMDKFA-SGVSMVASLSLAISYPPMAAAPHMFLNAYKNVLAVALETDYSYD 338 D+++K G+S VA+++L P + M ++A+KN+LAV++ T Y ++ Sbjct: 216 DMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 267
>DLL3_RAT (O88671) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) Length = 589 Score = 29.6 bits (65), Expect = 4.6 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -1 Query: 464 CFHGCLTVPGDLIPPHGCCTAHVPQCIQECSCGRFGDRLLV*PC 333 CF+G L V G+ P H P Q +C R DR + PC Sbjct: 323 CFNGGLCVGGE--DPDSAYVCHCPPAFQGSNCERRVDRCSLQPC 364
>O10A7_HUMAN (Q8NGE5) Olfactory receptor 10A7| Length = 316 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/52 (25%), Positives = 26/52 (50%) Frame = -3 Query: 159 VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCHALIY 4 ++ + P + SFV C T +F +++ E +L + Y + +C+ L Y Sbjct: 82 LVDLVSPRKIISFVGCGTQMYF-FFFFGSSECFLLSMMAYDRFVAICNPLHY 132
>OR8BC_HUMAN (Q8NGG6) Olfactory receptor 8B12 (Olfactory receptor OR11-317)| Length = 310 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/52 (25%), Positives = 26/52 (50%) Frame = -3 Query: 159 VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCHALIY 4 ++SF+ + SF C T FF ++ + + + L Y + +C+ L+Y Sbjct: 81 LMSFVSRKNIISFTGCMTQLFFFCFFVVSESFI-LSAMAYDRYVAICNPLLY 131
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 331 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 414 Q G +S+ SP+ P+E +C+ G VQQ Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587
>RIBD_SYNY3 (Q55158) Riboflavin biosynthesis protein ribD [Includes:| Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] Length = 368 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/41 (31%), Positives = 26/41 (63%) Frame = +3 Query: 324 ILSAWSYE*SVSKATARTFLYALRNMCGAAAMGGYEIARDS 446 I +A ++ V+ ++AR +++ LR+ C A +GG + RD+ Sbjct: 162 IATAQAHSSWVTSSSARHWVHQLRSQCQAVIIGGNTVRRDN 202
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 6/50 (12%) Frame = -1 Query: 485 DGQVCFWCFHGCLTVPGDLIPPHGCCTAHVP------QCIQECSCGRFGD 354 D C C C+ G PH C P QC+QEC G F D Sbjct: 997 DSGSCKRCDSHCVECQG----PHECTRCEEPFLFFQAQCVQECGKGYFAD 1042 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,422,839 Number of Sequences: 219361 Number of extensions: 955011 Number of successful extensions: 2507 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 2422 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2506 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)