ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_190607.1| Oryza sativa (japonica cultivar-group), predic... 147 4e-32
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
3dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
4dbj|AK071303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
5gb|AC005026.2| Homo sapiens BAC clone GS1-489L14 from 7, complet... 44 0.44
6ref|NM_001040105.1| Homo sapiens mucin 17, cell surface associat... 42 1.7
7emb|Z73951.1|LJRAB11C L.japonicus mRNA for small GTP-binding pro... 42 1.7
8gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosom... 42 1.7
9gb|AC105446.4| Homo sapiens BAC clone RP11-395B7 from 7, complet... 42 1.7
10emb|AJ606308.1| Homo sapiens mRNA for secreted mucin MUC17 (MUC1... 42 1.7
11emb|AJ606307.1| Homo sapiens mRNA for membrane mucin MUC17 (MUC1... 42 1.7
12gb|AC162174.4| Mus musculus chromosome 1, clone RP23-306P24, com... 42 1.7
13gb|AC171212.3| Gallus gallus BAC clone CH261-72C23 from chromoso... 42 1.7
14emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-1... 42 1.7
15gb|AC153644.3| Mus musculus BAC clone RP24-531A1 from 1, complet... 42 1.7
16gb|AC139368.10| Mus musculus chromosome 1, clone RP24-534C15, co... 42 1.7
17emb|AL928610.8| Zebrafish DNA sequence from clone CH211-245P6, c... 42 1.7
18gb|AY774516.1| Synthetic construct Francisella tularensis clone ... 40 6.9
19gb|AY701840.1| Rattus fuscipes greyii clone RfgG4 microsatellite... 40 6.9
20gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 6.9
21gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.9
22gb|AC147554.2| Mus musculus BAC clone RP24-274B6 from chromosome... 40 6.9
23emb|Z35603.1|CET02C12 Caenorhabditis elegans Cosmid T02C12, comp... 40 6.9
24gb|AC116327.4| Mus musculus BAC clone RP24-68L14 from 7, complet... 40 6.9
25gb|AC012590.5| Homo sapiens BAC clone CTD-2375H4 from 7, complet... 40 6.9
26emb|AL929401.8| Human DNA sequence from clone RP11-366E13 on chr... 40 6.9
27emb|AL132671.20|HSDJ92C8 Human DNA sequence from clone RP1-92C8 ... 40 6.9
28emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 6.9
29emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 6.9
30emb|BX323597.9| Zebrafish DNA sequence from clone CH211-227N13 i... 40 6.9
31gb|AC159538.20| Medicago truncatula clone mth2-48f16, complete s... 40 6.9
32gb|AC104803.4| Homo sapiens BAC clone RP11-460H9 from 4, complet... 40 6.9
33gb|AC021539.10| Homo sapiens chromosome 4, clone RP11-460H9, com... 40 6.9
34gb|AC008465.5| Homo sapiens chromosome 5 clone CTC-361C3, comple... 40 6.9
35emb|BX323556.6| Zebrafish DNA sequence from clone CH211-278P7 in... 40 6.9
36emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 i... 40 6.9
37emb|CR376851.5| Zebrafish DNA sequence from clone DKEY-48N5 in l... 40 6.9
38emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 40 6.9
39emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 40 6.9
40dbj|AP003502.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.9
41emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in... 40 6.9
42emb|AM039899.1| Hordeum vulgare partial mRNA for chromomethylase... 40 6.9
43dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.9
44gb|AY872104.1| Synthetic construct hypothetical protein (FTT0407... 40 6.9
45dbj|AP004551.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.9

>ref|NM_190607.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 651

 Score =  147 bits (74), Expect = 4e-32
 Identities = 148/170 (87%), Gaps = 2/170 (1%)
 Strand = Plus / Minus

                                                                       
Query: 327 aactggaacagcaagaaccttttgcgttgg-tggatggttcagcaacgttaatagtcgtt 385
           |||| ||||||||||||||||||| |  || |||| | |||||||||||| || || |||
Sbjct: 649 aactagaacagcaagaaccttttgtggcggctgga-gcttcagcaacgttgatcgtagtt 591

                                                                       
Query: 386 ccttgcatcgaacgcccgttggcagcagcggactcctgtgctgcaagtgcttttttgctt 445
           |||||||| |||||||| || | ||  ||||| ||||| |||||||||||||| ||||||
Sbjct: 590 ccttgcatggaacgcccatttgtagacgcggattcctgagctgcaagtgctttcttgctt 531

                                                             
Query: 446 acaatctggtgaatttcactcagcacagtatggaatgccttctccacatt 495
           ||||||||||||||||||||||  |||||||||||||| |||||||||||
Sbjct: 530 acaatctggtgaatttcactcaatacagtatggaatgctttctccacatt 481



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  147 bits (74), Expect = 4e-32
 Identities = 148/170 (87%), Gaps = 2/170 (1%)
 Strand = Plus / Plus

                                                                            
Query: 327      aactggaacagcaagaaccttttgcgttgg-tggatggttcagcaacgttaatagtcgtt 385
                |||| ||||||||||||||||||| |  || |||| | |||||||||||| || || |||
Sbjct: 36461478 aactagaacagcaagaaccttttgtggcggctgga-gcttcagcaacgttgatcgtagtt 36461536

                                                                            
Query: 386      ccttgcatcgaacgcccgttggcagcagcggactcctgtgctgcaagtgcttttttgctt 445
                |||||||| |||||||| || | ||  ||||| ||||| |||||||||||||| ||||||
Sbjct: 36461537 ccttgcatggaacgcccatttgtagacgcggattcctgagctgcaagtgctttcttgctt 36461596

                                                                  
Query: 446      acaatctggtgaatttcactcagcacagtatggaatgccttctccacatt 495
                ||||||||||||||||||||||  |||||||||||||| |||||||||||
Sbjct: 36461597 acaatctggtgaatttcactcaatacagtatggaatgctttctccacatt 36461646



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>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0005H10
          Length = 142885

 Score =  147 bits (74), Expect = 4e-32
 Identities = 148/170 (87%), Gaps = 2/170 (1%)
 Strand = Plus / Plus

                                                                          
Query: 327    aactggaacagcaagaaccttttgcgttgg-tggatggttcagcaacgttaatagtcgtt 385
              |||| ||||||||||||||||||| |  || |||| | |||||||||||| || || |||
Sbjct: 113317 aactagaacagcaagaaccttttgtggcggctgga-gcttcagcaacgttgatcgtagtt 113375

                                                                          
Query: 386    ccttgcatcgaacgcccgttggcagcagcggactcctgtgctgcaagtgcttttttgctt 445
              |||||||| |||||||| || | ||  ||||| ||||| |||||||||||||| ||||||
Sbjct: 113376 ccttgcatggaacgcccatttgtagacgcggattcctgagctgcaagtgctttcttgctt 113435

                                                                
Query: 446    acaatctggtgaatttcactcagcacagtatggaatgccttctccacatt 495
              ||||||||||||||||||||||  |||||||||||||| |||||||||||
Sbjct: 113436 acaatctggtgaatttcactcaatacagtatggaatgctttctccacatt 113485



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>dbj|AK071303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087L18, full
           insert sequence
          Length = 1131

 Score =  147 bits (74), Expect = 4e-32
 Identities = 148/170 (87%), Gaps = 2/170 (1%)
 Strand = Plus / Minus

                                                                       
Query: 327 aactggaacagcaagaaccttttgcgttgg-tggatggttcagcaacgttaatagtcgtt 385
           |||| ||||||||||||||||||| |  || |||| | |||||||||||| || || |||
Sbjct: 831 aactagaacagcaagaaccttttgtggcggctgga-gcttcagcaacgttgatcgtagtt 773

                                                                       
Query: 386 ccttgcatcgaacgcccgttggcagcagcggactcctgtgctgcaagtgcttttttgctt 445
           |||||||| |||||||| || | ||  ||||| ||||| |||||||||||||| ||||||
Sbjct: 772 ccttgcatggaacgcccatttgtagacgcggattcctgagctgcaagtgctttcttgctt 713

                                                             
Query: 446 acaatctggtgaatttcactcagcacagtatggaatgccttctccacatt 495
           ||||||||||||||||||||||  |||||||||||||| |||||||||||
Sbjct: 712 acaatctggtgaatttcactcaatacagtatggaatgctttctccacatt 663



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>gb|AC005026.2| Homo sapiens BAC clone GS1-489L14 from 7, complete sequence
          Length = 123526

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 5     aaattcaagagcataataattc 26
             ||||||||||||||||||||||
Sbjct: 81053 aaattcaagagcataataattc 81074



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>ref|NM_001040105.1| Homo sapiens mucin 17, cell surface associated (MUC17), mRNA
          Length = 14360

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 303  cacttccactggaaccagttc 323
            |||||||||||||||||||||
Sbjct: 8048 cacttccactggaaccagttc 8068



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>emb|Z73951.1|LJRAB11C L.japonicus mRNA for small GTP-binding protein, RAB11C
          Length = 1031

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 419 tcctgtgctgcaagtgcttttttgcttacaatctggt 455
           ||||| || ||||||||||||||||| ||||| ||||
Sbjct: 754 tcctgagcagcaagtgcttttttgctaacaatatggt 718



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>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence
          Length = 167927

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    gggattcaggatgagaaacaa 227
              |||||||||||||||||||||
Sbjct: 145067 gggattcaggatgagaaacaa 145047



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>gb|AC105446.4| Homo sapiens BAC clone RP11-395B7 from 7, complete sequence
          Length = 139517

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 303   cacttccactggaaccagttc 323
             |||||||||||||||||||||
Sbjct: 76649 cacttccactggaaccagttc 76669



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>emb|AJ606308.1| Homo sapiens mRNA for secreted mucin MUC17 (MUC17 gene)
          Length = 14094

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 303  cacttccactggaaccagttc 323
            |||||||||||||||||||||
Sbjct: 8048 cacttccactggaaccagttc 8068



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>emb|AJ606307.1| Homo sapiens mRNA for membrane mucin MUC17 (MUC17 gene)
          Length = 14246

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 303  cacttccactggaaccagttc 323
            |||||||||||||||||||||
Sbjct: 8048 cacttccactggaaccagttc 8068



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>gb|AC162174.4| Mus musculus chromosome 1, clone RP23-306P24, complete sequence
          Length = 211734

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 149  ggagaggcaggttatagagta 169
            |||||||||||||||||||||
Sbjct: 8400 ggagaggcaggttatagagta 8380



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>gb|AC171212.3| Gallus gallus BAC clone CH261-72C23 from chromosome ul, complete sequence
          Length = 202705

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 36     ttattattgttgttaacagga 56
              |||||||||||||||||||||
Sbjct: 127642 ttattattgttgttaacagga 127622



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>emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-196A3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176202

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     attattgttgttaacaggaaa 58
              |||||||||||||||||||||
Sbjct: 115120 attattgttgttaacaggaaa 115100



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>gb|AC153644.3| Mus musculus BAC clone RP24-531A1 from 1, complete sequence
          Length = 166988

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   gggattcaggatgagaaacaa 227
             |||||||||||||||||||||
Sbjct: 45124 gggattcaggatgagaaacaa 45104



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>gb|AC139368.10| Mus musculus chromosome 1, clone RP24-534C15, complete sequence
          Length = 166278

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   ggagaggcaggttatagagta 169
             |||||||||||||||||||||
Sbjct: 65573 ggagaggcaggttatagagta 65553



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>emb|AL928610.8| Zebrafish DNA sequence from clone CH211-245P6, complete sequence
          Length = 82988

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    ttgacaattattattgttgtt 49
             |||||||||||||||||||||
Sbjct: 14635 ttgacaattattattgttgtt 14655



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>gb|AY774516.1| Synthetic construct Francisella tularensis clone FLH157998.01X
           NT02FT1677 gene, complete cds
          Length = 1077

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   aaattcaagagcataataat 24
           ||||||||||||||||||||
Sbjct: 95  aaattcaagagcataataat 114



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>gb|AY701840.1| Rattus fuscipes greyii clone RfgG4 microsatellite sequence
          Length = 640

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 aaaatgggaatgatttgatg 149
           ||||||||||||||||||||
Sbjct: 555 aaaatgggaatgatttgatg 536



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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 13      gagcataataattccattgacaat 36
               |||||||||||||||| |||||||
Sbjct: 1698488 gagcataataattccagtgacaat 1698511



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>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
              sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     ttgttgttaacaggaaataa 61
              ||||||||||||||||||||
Sbjct: 140895 ttgttgttaacaggaaataa 140876



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>gb|AC147554.2| Mus musculus BAC clone RP24-274B6 from chromosome 7, complete sequence
          Length = 154146

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    tgggaatgatttgatggaga 153
              ||||||||||||||||||||
Sbjct: 145488 tgggaatgatttgatggaga 145507



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>emb|Z35603.1|CET02C12 Caenorhabditis elegans Cosmid T02C12, complete sequence
          Length = 22800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  ttctgcgaaaacaaaagttt 291
            ||||||||||||||||||||
Sbjct: 3347 ttctgcgaaaacaaaagttt 3366



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>gb|AC116327.4| Mus musculus BAC clone RP24-68L14 from 7, complete sequence
          Length = 194290

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    tgggaatgatttgatggaga 153
              ||||||||||||||||||||
Sbjct: 161604 tgggaatgatttgatggaga 161585



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>gb|AC012590.5| Homo sapiens BAC clone CTD-2375H4 from 7, complete sequence
          Length = 149708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    caggatgagaaacaagaata 232
              ||||||||||||||||||||
Sbjct: 114302 caggatgagaaacaagaata 114321



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>emb|AL929401.8| Human DNA sequence from clone RP11-366E13 on chromosome X Contains the
              gene for a novel protein similar to 40S ribosomal protein
              S26 (RPS26) and two CpG islands, complete sequence
          Length = 194095

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    ttcaggatgagaaacaagaa 230
              ||||||||||||||||||||
Sbjct: 173328 ttcaggatgagaaacaagaa 173347



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>emb|AL132671.20|HSDJ92C8 Human DNA sequence from clone RP1-92C8 on chromosome 6 Contains a novel
             gene, a RAP1A pseudogene, the 5' end of the ROS1 gene for
             v-ros UR2 sarcoma virus oncogene homolog 1 (avian), the 5'
             end of the DCBLD1 gene for discoidin CUB and LCCL domain
             containing 1 and two CpG islands, complete sequence
          Length = 131060

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 459   tttcactcagcacagtatggaatg 482
             |||||||||||||| |||||||||
Sbjct: 27769 tttcactcagcacaatatggaatg 27746



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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 13      gagcataataattccattgacaat 36
               |||||||||||||||| |||||||
Sbjct: 1661683 gagcataataattccagtgacaat 1661660



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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 13      gagcataataattccattgacaat 36
               |||||||||||||||| |||||||
Sbjct: 1664466 gagcataataattccagtgacaat 1664489



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>emb|BX323597.9| Zebrafish DNA sequence from clone CH211-227N13 in linkage group 11,
              complete sequence
          Length = 177773

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     acaattattattgttgttaa 51
              ||||||||||||||||||||
Sbjct: 135679 acaattattattgttgttaa 135660



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>gb|AC159538.20| Medicago truncatula clone mth2-48f16, complete sequence
          Length = 123581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aattattattgttgttaaca 53
             ||||||||||||||||||||
Sbjct: 58289 aattattattgttgttaaca 58270



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>gb|AC104803.4| Homo sapiens BAC clone RP11-460H9 from 4, complete sequence
          Length = 102923

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aattattattgttgttaaca 53
             ||||||||||||||||||||
Sbjct: 56373 aattattattgttgttaaca 56354



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>gb|AC021539.10| Homo sapiens chromosome 4, clone RP11-460H9, complete sequence
          Length = 191158

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     aattattattgttgttaaca 53
              ||||||||||||||||||||
Sbjct: 144608 aattattattgttgttaaca 144589



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>gb|AC008465.5| Homo sapiens chromosome 5 clone CTC-361C3, complete sequence
          Length = 106076

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aattattattgttgttaaca 53
             ||||||||||||||||||||
Sbjct: 46515 aattattattgttgttaaca 46534



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>emb|BX323556.6| Zebrafish DNA sequence from clone CH211-278P7 in linkage group 8,
             complete sequence
          Length = 178137

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    attattattgttgttaacag 54
             ||||||||||||||||||||
Sbjct: 70701 attattattgttgttaacag 70720



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>emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 in linkage group 18,
              complete sequence
          Length = 183462

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                  
Query: 16     cataataattccattgacaattattattgttgttaa 51
              ||||||||||||||| |  |||||||||||||||||
Sbjct: 100564 cataataattccatt-attattattattgttgttaa 100530



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>emb|CR376851.5| Zebrafish DNA sequence from clone DKEY-48N5 in linkage group 22,
             complete sequence
          Length = 51574

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tgacaattattattgttgtt 49
             ||||||||||||||||||||
Sbjct: 14960 tgacaattattattgttgtt 14941



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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aaattcaagagcataataat 24
              ||||||||||||||||||||
Sbjct: 455216 aaattcaagagcataataat 455235



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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aaattcaagagcataataat 24
              ||||||||||||||||||||
Sbjct: 413874 aaattcaagagcataataat 413893



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>dbj|AP003502.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-69K18, complete
             sequence
          Length = 93670

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   atacaaaatgggaatgattt 145
             ||||||||||||||||||||
Sbjct: 59822 atacaaaatgggaatgattt 59841



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>emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11,
             complete sequence
          Length = 229692

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   ttcaactggaacagcaagaa 343
             ||||||||||||||||||||
Sbjct: 43649 ttcaactggaacagcaagaa 43668



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>emb|AM039899.1| Hordeum vulgare partial mRNA for chromomethylase 1 (cmt1 gene)
          Length = 2441

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   ccattgacaattattattgt 45
            ||||||||||||||||||||
Sbjct: 2398 ccattgacaattattattgt 2417



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>dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L19, TM0070,
             complete sequence
          Length = 128164

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   ttcaggatgagaaacaagaa 230
             ||||||||||||||||||||
Sbjct: 58717 ttcaggatgagaaacaagaa 58698



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>gb|AY872104.1| Synthetic construct hypothetical protein (FTT0407) gene, complete
           cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   aaattcaagagcataataat 24
           ||||||||||||||||||||
Sbjct: 173 aaattcaagagcataataat 192



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>dbj|AP004551.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-167K18, complete
            sequence
          Length = 91093

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  atacaaaatgggaatgattt 145
            ||||||||||||||||||||
Sbjct: 1070 atacaaaatgggaatgattt 1089


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,967,956
Number of Sequences: 3902068
Number of extensions: 4967956
Number of successful extensions: 125109
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 124875
Number of HSP's gapped (non-prelim): 228
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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