ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NUS1_ASPOR (P24021) Nuclease S1 precursor (EC 3.1.30.1) (Endonuc... 53 4e-07
2NUP3_PENSQ (P24504) Nuclease PA3 (EC 3.1.3.6) (Endonuclease PA3)... 33 0.42
3NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf... 33 0.42
4NUP1_PENCI (P24289) Nuclease P1 (EC 3.1.30.1) (Endonuclease P1) ... 32 0.71
5UL110_HCMVA (P16830) Hypothetical protein UL110 32 0.71
6ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor e... 32 0.93
7MANC7_ECOLI (P37741) Mannose-1-phosphate guanylyltransferase [GD... 32 0.93
8NELFA_MOUSE (Q8BG30) Negative elongation factor A (NELF-A) (Wolf... 32 1.2
9AMPH_RAT (O08838) Amphiphysin 32 1.2
10AMPH_MOUSE (Q7TQF7) Amphiphysin 31 1.6
11NRT2_CHICK (P55807) NAD(P)(+)--arginine ADP-ribosyltransferase 2... 31 2.1
12NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alph... 30 2.7
13CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) ... 30 3.5
14FUSB_BURCE (P24127) Fusaric acid resistance protein fusB 30 3.5
15SYI_PSEAE (Q9HVM4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 30 4.6
16KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subu... 30 4.6
17THII_AERPE (Q9YEW8) Probable thiamine biosynthesis protein thiI 30 4.6
18AMPH_HUMAN (P49418) Amphiphysin 30 4.6
19GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 pre... 29 6.0
20EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 29 6.0
21PLXB3_HUMAN (Q9ULL4) Plexin-B3 precursor 29 6.0
22JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (... 29 6.0
23SYFB_BACHK (Q6HCW8) Phenylalanyl-tRNA synthetase beta chain (EC ... 29 6.0
24SYFB_BACCZ (Q633N5) Phenylalanyl-tRNA synthetase beta chain (EC ... 29 6.0
25SYFB_BACCR (Q817I7) Phenylalanyl-tRNA synthetase beta chain (EC ... 29 6.0
26SYFB_BACC1 (Q72ZI2) Phenylalanyl-tRNA synthetase beta chain (EC ... 29 6.0
27SYFB_BACAN (Q81L31) Phenylalanyl-tRNA synthetase beta chain (EC ... 29 6.0
28RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subun... 29 7.8
29ZFP26_MOUSE (P10076) Zinc finger protein 26 (Zfp-26) (mKR3 prote... 29 7.8
30VAX2_MOUSE (Q9WTP9) Ventral anterior homeobox 2 (Ventral retina ... 29 7.8

>NUS1_ASPOR (P24021) Nuclease S1 precursor (EC 3.1.30.1) (Endonuclease S1)|
           (Single-stranded-nucleate endonuclease)
           (Deoxyribonuclease S1)
          Length = 287

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
 Frame = -3

Query: 475 TELHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIK-GAWLDKVQEWEE--CAKNQTACS 305
           T LHHIWD N+ + A   Y    A  + D L + IK G +  K   W +    K+  + S
Sbjct: 165 TNLHHIWDTNMPEEAAGGYSLSVAKTYADLLTERIKTGTYSSKKDSWTDGIDIKDPVSTS 224

Query: 304 DIYGSESIAAACDS------AYKNVTEGSTLGDEYFGSRLPVVKLRLAQGGVRLAATLNR 143
            I+ +++    C +      AY N T+   L  EY+    PV +  +A+ G RLAA L+ 
Sbjct: 225 MIWAADANTYVCSTVLDDGLAYINSTD---LSGEYYDKSQPVFEELIAKAGYRLAAWLDL 281

Query: 142 I 140
           I
Sbjct: 282 I 282



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>NUP3_PENSQ (P24504) Nuclease PA3 (EC 3.1.3.6) (Endonuclease PA3)|
           (Deoxyribonuclease PA3)
          Length = 270

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
 Frame = -3

Query: 469 LHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIK-GAWLDKVQEW--EECAKNQTACSDI 299
           LH  WD  + Q     +   DA  +   L ++I+ G +  +   W   +        +  
Sbjct: 148 LHSDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQATGWIKGDNISEPITTATR 207

Query: 298 YGSESIAAACDSAYKNVTEGSTLGD---EYFGSRLPVVKLRLAQGGVRLAATLNRIFG 134
           + S++ A  C     +       GD    Y+ S +  ++L++A+GG RLA  +N I G
Sbjct: 208 WASDANALVCTVVMPHGAAALQTGDLYPTYYDSVIDTIELQIAKGGYRLANWINEIHG 265



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>NELFA_HUMAN (Q9H3P2) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn|
           syndrome candidate 2 protein)
          Length = 549

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = +1

Query: 181 PAST*PPAACFRNTHRPASNPLSRSCTPSRMLQRCSPTH---ICPSTPSGSWRTPPIPAL 351
           P+S  PPA   R   RP   P + S T     ++ +P +   + P+TP+ +  T P   L
Sbjct: 360 PSSETPPAPSSREASRPPEEPSAPSPTLPAQFKQRAPMYNSGLSPATPTPAAPTSP---L 416

Query: 352 CLTTPPLCSCST 387
             TTPP  + +T
Sbjct: 417 TPTTPPAVAPTT 428



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>NUP1_PENCI (P24289) Nuclease P1 (EC 3.1.30.1) (Endonuclease P1)|
           (Deoxyribonuclease P1)
          Length = 270

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
 Frame = -3

Query: 469 LHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIK-GAWLDKVQEW--EECAKNQTACSDI 299
           LH  WD  + Q     +   DA  +   L ++I+ G +  +   W   +        +  
Sbjct: 148 LHSDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATR 207

Query: 298 YGSESIAAACDSAYKNVTEGSTLGD---EYFGSRLPVVKLRLAQGGVRLAATLNRIFG 134
           + S++ A  C     +       GD    Y+ S +  ++L++A+GG RLA  +N I G
Sbjct: 208 WASDANALVCTVVMPHGAAALQTGDLYPTYYDSVIDTIELQIAKGGYRLANWINEIHG 265



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>UL110_HCMVA (P16830) Hypothetical protein UL110|
          Length = 127

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +1

Query: 223 HRPASNPLSRSCT-PSRMLQRCSPTHIC--PSTPSGSWRTPPIPALCLTTP 366
           HR   N  S+  T P  +LQR   T++C  PS  SG W +PP+P +    P
Sbjct: 13  HRTGYNQASKQQTAPPCLLQRTVTTYVCRLPSR-SGFWGSPPLPIIFSFVP 62



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>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 562

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +1

Query: 217 NTHRPASNPLSRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTPP 369
           NT+ P+S P +   TP      C P    PS P     TPPIP+   T PP
Sbjct: 497 NTYHPSSPPPAPIYTPPPPAPHCPPP--APSAP-----TPPIPSPPSTLPP 540



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>MANC7_ECOLI (P37741) Mannose-1-phosphate guanylyltransferase [GDP] (EC|
           2.7.7.22) (GDP-mannose pyrophosphorylase) (GMP)
          Length = 464

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 23/75 (30%), Positives = 36/75 (48%)
 Frame = +3

Query: 42  NTHSPGIICANLQKSLAVYKTRHDNH*GLDSPNILLSVAANRTPPCASLNLTTGSLLPKY 221
           NT SP +IC  L + +   + RH N   LD+ NI+L  +   T P     +   +L+ K 
Sbjct: 51  NTSSPVVICNELHRFIVAEQLRHLNK--LDN-NIILEPSGRNTAPA----ICIAALILKM 103

Query: 222 SSPSVEPSVTFLYAE 266
             P+  P +  L A+
Sbjct: 104 KHPNENPLMLVLPAD 118



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>NELFA_MOUSE (Q8BG30) Negative elongation factor A (NELF-A) (Wolf-Hirschhorn|
           syndrome candidate 2 homolog) (mWHSC2)
          Length = 530

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +1

Query: 181 PAST*PPAACFRNTHRPASNPLSRSCTPSRMLQRCSPTH---ICPSTPSGSWRTPPIPAL 351
           P+S  PPA   R   RP   P + S T     ++ +P +   + P+TP+ +  T P   L
Sbjct: 339 PSSETPPAPPSREASRPPEEPSAPSPTLPTQFKQRAPMYNSGLSPATPAPAAPTSP---L 395

Query: 352 CLTTPP 369
             TTPP
Sbjct: 396 TPTTPP 401



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>AMPH_RAT (O08838) Amphiphysin|
          Length = 683

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 SNPL-SRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTP 366
           ++PL S + +P+  L   SP  + P +PS + + PP+P L   TP
Sbjct: 267 ASPLPSPTASPNHTLAPASPAPVRPRSPSQTRKGPPVPPLPKVTP 311



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>AMPH_MOUSE (Q7TQF7) Amphiphysin|
          Length = 686

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 247 SRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTP 366
           S + +P+  L   SP  + P +PS + + PP+P L   TP
Sbjct: 272 SPTASPNHTLAPASPAPVRPRSPSQTRKGPPVPPLPKVTP 311



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>NRT2_CHICK (P55807) NAD(P)(+)--arginine ADP-ribosyltransferase 2 precursor (EC|
           2.4.2.31) (Mono(ADP-ribosyl)transferase 2) (AT2)
          Length = 312

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -1

Query: 186 GWRKAASDWQLRSTGYLVNP 127
           GWRKAA++WQ R  GYL +P
Sbjct: 76  GWRKAAAEWQKR-WGYLAHP 94



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>NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alpha subunit,|
           muscle-specific form (Alpha-NAC, muscle-specific form)
          Length = 2187

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +1

Query: 199 PAACFRNTHRPASNPLSRSCTPSRMLQRCSPTHICPSTPSG--SWRTPPIPALCLTTP 366
           P +C   TH    NP + S  P+        TH+ P T SG  S + P  P   L  P
Sbjct: 401 PVSCIGATHHALDNPSAISVAPA--------THVPPPTSSGLVSSKDPASPVTSLVVP 450



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>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal|
           transduction protein CBL) (Proto-oncogene c-CBL)
           (Casitas B-lineage lymphoma proto-oncogene)
          Length = 913

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +1

Query: 226 RPASNPLSRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTP 366
           RP   PL   CTP     R     +  S P  SW + PIP + + TP
Sbjct: 557 RPQRRPLP--CTPGDCPSRDKLPPVPSSRPGDSWLSRPIPKVPVATP 601



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>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB|
          Length = 142

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +1

Query: 169 RRLAP----AST*PPAACFRNTHRPASNPLSRSCTPSRMLQRCSPTHICPSTPSGSWRTP 336
           R+ AP    AST  PA    ++ R      SRS   SR  + CS    C  +P GS   P
Sbjct: 71  RKAAPCSRKASTGSPARSSGSSRR------SRSSGCSRSSRSCS----CWRSPCGSRCAP 120

Query: 337 PIPALCLTTPPLCSCS 384
           P P    T+    SCS
Sbjct: 121 PAPRATATSAVTASCS 136



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>SYI_PSEAE (Q9HVM4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 943

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +3

Query: 270 HAAAMLSDPYMS---EHAVWFLAHSSHSCTLSNHAPFMLL 380
           HA+  ++D Y+    +H  WF +     C + NHAP+  L
Sbjct: 556 HASGPVADLYLEGSDQHRGWFHSSLLTGCAIDNHAPYRQL 595



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>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 401

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 244 LSRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTPPL 372
           +S +CT   +  R S   +CPS PSG      +      TPP+
Sbjct: 3   VSFACTEQTLRSRTSEDRLCPSRPSGGQNGVSMAQTKQRTPPM 45



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>THII_AERPE (Q9YEW8) Probable thiamine biosynthesis protein thiI|
          Length = 412

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
 Frame = -3

Query: 394 VDALNKSIKGAWLDKVQEWEECAKNQTACSDIYGSESIAAACDSAYKNVTEGSTLGDEYF 215
           V+A  + ++G  L +++   + A    A + ++G +S++ A +  Y  + + +    E+F
Sbjct: 57  VEAEVERLQGRVLVRLRSPGDAAAAARASARVFGVKSVSPAVEVEYSGIEDLAEKAAEFF 116

Query: 214 GSRL--PVVKLRLAQGGV 167
           G R+   V ++R  + GV
Sbjct: 117 GERVRGRVFRVRARRSGV 134



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>AMPH_HUMAN (P49418) Amphiphysin|
          Length = 695

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 247 SRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTP 366
           S + +P+  L   SP    P +PS + + PP+P L   TP
Sbjct: 272 SPTASPNHTLAPASPAPARPRSPSQTRKGPPVPPLPKVTP 311



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>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor (Probable|
            G-protein coupled receptor 158-like 1)
          Length = 2367

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 21/85 (24%), Positives = 41/85 (48%)
 Frame = +3

Query: 54   PGIICANLQKSLAVYKTRHDNH*GLDSPNILLSVAANRTPPCASLNLTTGSLLPKYSSPS 233
            P ++ + L++ LA   +R ++   ++ P  L   +A+      + NLT G  LP+    S
Sbjct: 783  PPLLDSLLRRKLAKKASRTESRESVEGPPALGFRSAS------AHNLTVGERLPRARPAS 836

Query: 234  VEPSVTFLYAESHAAAMLSDPYMSE 308
            ++ S++   +   A  M S  Y+ E
Sbjct: 837  LQKSLSVASSREKALLMASQAYLEE 861



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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 220 THRPASNPLSRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTPP 369
           T+    +P + S  P R +    P H  P TP+ ++  PP P      PP
Sbjct: 526 TYGQPPSPPTFSPPPPRQIHSPPPPHWQPRTPTPTYGQPPSPPTFSAPPP 575



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>PLXB3_HUMAN (Q9ULL4) Plexin-B3 precursor|
          Length = 1909

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 SRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTPP 369
           SR C P   L R S   +C ++P+ +  T P+     + PP
Sbjct: 875 SRPCNPEPSLYRTSARIVCVTSPAPNGTTGPVRVAIKSQPP 915



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>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
            (Histocompatibility Y antigen) (H-Y)
          Length = 1548

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +1

Query: 52   RQASSVPIYKNHLQSIKPDMIITKAWIHQIS 144
            R+A ++P+Y  ++QS+K  +   +AWI  ++
Sbjct: 1003 REAENIPVYLPNIQSLKEALTKAQAWIADVN 1033



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>SYFB_BACHK (Q6HCW8) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 806

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -3

Query: 487 YRRKTELHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIKGAWLDKVQEWE---ECAKNQ 317
           YR   E   I DV   + A+K        + V+ LNK +KG  +  V E E   E  K  
Sbjct: 5   YRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLS 64

Query: 316 TACSDIYGSESIAAACDSAYKNVTEGSTLGDEYFGSRLP 200
               DI   E +   C +A  N+ +G  +     G+ LP
Sbjct: 65  KCLIDIGEEEPVQIICGAA--NIAKGLKVPVAKVGAVLP 101



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>SYFB_BACCZ (Q633N5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 806

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -3

Query: 487 YRRKTELHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIKGAWLDKVQEWE---ECAKNQ 317
           YR   E   I DV   + A+K        + V+ LNK +KG  +  V E E   E  K  
Sbjct: 5   YRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLS 64

Query: 316 TACSDIYGSESIAAACDSAYKNVTEGSTLGDEYFGSRLP 200
               DI   E +   C +A  N+ +G  +     G+ LP
Sbjct: 65  KCLIDIGEEEPVQIICGAA--NIAKGLKVPVAKVGAVLP 101



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>SYFB_BACCR (Q817I7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 806

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -3

Query: 487 YRRKTELHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIKGAWLDKVQEWE---ECAKNQ 317
           YR   E   I DV   + A+K        + V+ LNK +KG  +  V E E   E  K  
Sbjct: 5   YRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLS 64

Query: 316 TACSDIYGSESIAAACDSAYKNVTEGSTLGDEYFGSRLP 200
               DI   E +   C +A  N+ +G  +     G+ LP
Sbjct: 65  KCLIDIGEEEPVQIICGAA--NIAKGLKVPVAKVGAVLP 101



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>SYFB_BACC1 (Q72ZI2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 806

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -3

Query: 487 YRRKTELHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIKGAWLDKVQEWE---ECAKNQ 317
           YR   E   I DV   + A+K        + V+ LNK +KG  +  V E E   E  K  
Sbjct: 5   YRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLS 64

Query: 316 TACSDIYGSESIAAACDSAYKNVTEGSTLGDEYFGSRLP 200
               DI   E +   C +A  N+ +G  +     G+ LP
Sbjct: 65  KCLIDIGEEEPVQIICGAA--NIAKGLKVPVAKVGAVLP 101



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>SYFB_BACAN (Q81L31) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 806

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -3

Query: 487 YRRKTELHHIWDVNIIQTAEKDYYDEDAGKFVDALNKSIKGAWLDKVQEWE---ECAKNQ 317
           YR   E   I DV   + A+K        + V+ LNK +KG  +  V E E   E  K  
Sbjct: 5   YRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLS 64

Query: 316 TACSDIYGSESIAAACDSAYKNVTEGSTLGDEYFGSRLP 200
               DI   E +   C +A  N+ +G  +     G+ LP
Sbjct: 65  KCLIDIGEEEPVQIICGAA--NIAKGLKVPVAKVGAVLP 101



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>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1840

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 160  PIGRRLAPAST*PPAACFRNTHRPASNPLSRSCTPSRMLQRCSPTHICPSTPSGSWRTP 336
            P   RL+PAS   P +   +   P+ +P S S +PS      SPT+  PS+P  S  +P
Sbjct: 1742 PSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPS------SPTY-SPSSPYSSGASP 1793



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>ZFP26_MOUSE (P10076) Zinc finger protein 26 (Zfp-26) (mKR3 protein) (Fragment)|
          Length = 428

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -3

Query: 442 IQTAEKDYYDEDAGKFV---DALNKSIKGAWLDKVQEWEECAKNQTACSD 302
           I T EK Y  +  GK       LNK ++    +K  E++EC +N T  +D
Sbjct: 367 IHTGEKPYVCQYCGKAFTEHSGLNKHLRKHTGEKPYEYKECGENFTTSAD 416



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>VAX2_MOUSE (Q9WTP9) Ventral anterior homeobox 2 (Ventral retina homeodomain|
           protein)
          Length = 292

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 229 PASNPLSRSCTPSRMLQRCSPTHICPSTPSGSWRTPPIPALCLTTPPL 372
           PAS+  +    P     R +P    PS  + S   PP+PA+C ++ PL
Sbjct: 211 PASHRGTSLVDPRNSSPRLNPM---PSASASSPLPPPLPAICFSSAPL 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,388,178
Number of Sequences: 219361
Number of extensions: 1508679
Number of successful extensions: 5223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5208
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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