>dbj|AK071917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071I09, full
            insert sequence
          Length = 3171

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 162  aatcggacgccgccttgcgccagcctcaacttgaccaccggcagcctgcttccgaaatac 221
            |||| ||||||||||||||| ||||| |  || || |||||||  ||||| |||||||| 
Sbjct: 2979 aatctgacgccgccttgcgctagcctgagattcacaaccggcaatctgctcccgaaatat 2920

                                                                        
Query: 222  tcatcgcccagcgtcgaaccctctgtcacgttcttgtacgccgagtcgcatgctgcagcg 281
             ||||  ||||    ||| | |||||||||| |||||||||| |||||||||||||||||
Sbjct: 2919 gcatcttccaggagtgaatcttctgtcacgtccttgtacgcccagtcgcatgctgcagcg 2860

                    
Query: 282  atgctctc 289
            ||||||||
Sbjct: 2859 atgctctc 2852

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                              
Query: 243     tctgtcacgttcttgtacgccgagtcgcatgctgcagcgatgctctc 289
               |||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 1561994 tctgtcacgtccttgtacgcccagtcgcatgctgcagcgatgctctc 1562040

>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0409B08
          Length = 134673

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                             
Query: 243    tctgtcacgttcttgtacgccgagtcgcatgctgcagcgatgctctc 289
              |||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 127642 tctgtcacgtccttgtacgcccagtcgcatgctgcagcgatgctctc 127688

>emb|BX321901.5| Mouse DNA sequence from clone RP23-303P18 on chromosome 2, complete
             sequence
          Length = 112140

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 9     atctatccattttatttccata 30
             ||||||||||||||||||||||
Sbjct: 16040 atctatccattttatttccata 16019

>emb|BX640521.12| Zebrafish DNA sequence from clone DKEY-125I10 in linkage group 5,
             complete sequence
          Length = 126380

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 71    caatttacaaaaatcacttgcagtctataaaac 103
             |||||||||||||||| || |||| ||||||||
Sbjct: 45308 caatttacaaaaatcatttacagtgtataaaac 45340

>gb|AE004635.1| Pseudomonas aeruginosa PAO1, section 196 of 529 of the complete
            genome
          Length = 11251

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 194  gaccaccggcagcctgcttccgaaa 218
            |||| ||||||||||||||||||||
Sbjct: 2532 gaccgccggcagcctgcttccgaaa 2508

>ref|NM_116034.2| Arabidopsis thaliana nucleic acid binding AT3G61690 mRNA, complete
            cds
          Length = 4471

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cattttatttccatagaaaa 35
            ||||||||||||||||||||
Sbjct: 4335 cattttatttccatagaaaa 4354

>gb|AC009843.9| Drosophila melanogaster clone BACR01G11, complete sequence
          Length = 192819

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    ctatccattttatttccata 30
             ||||||||||||||||||||
Sbjct: 73770 ctatccattttatttccata 73789

>gb|AC167244.2| Mus musculus BAC clone RP24-84C23 from chromosome 9, complete sequence
          Length = 235852

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     attttatttccatagaaaaa 36
              ||||||||||||||||||||
Sbjct: 152983 attttatttccatagaaaaa 152964

>gb|AY170465.1| Leishmania mexicana mexicana alpha adaptin gene, complete cds
          Length = 5000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  gacgccgccttgcgccagcc 186
            ||||||||||||||||||||
Sbjct: 3652 gacgccgccttgcgccagcc 3633

>gb|AC006013.3| Homo sapiens PAC clone RP5-945F2 from 7, complete sequence
          Length = 159002

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 445   tgttcacgtcccagatatgatgga 468
             ||||| ||||||||||||||||||
Sbjct: 99712 tgttcgcgtcccagatatgatgga 99689

>emb|AL606759.8| Human DNA sequence from clone CTD-2319N17 on chromosome X, complete
            sequence
          Length = 30082

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 14   tccattttatttccatagaaaaat 37
            |||||||||| |||||||||||||
Sbjct: 7232 tccattttatatccatagaaaaat 7255

>emb|BX842641.1| Neurospora crassa DNA linkage group I BAC contig B22I21
          Length = 124321

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   acgccgagtcgcatgctgca 278
             ||||||||||||||||||||
Sbjct: 17568 acgccgagtcgcatgctgca 17587

>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16
          Length = 104868

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    cattttatttccatagaaaa 35
             ||||||||||||||||||||
Sbjct: 45260 cattttatttccatagaaaa 45279

>gb|BT008633.1| Arabidopsis thaliana clone RAFL19-27-F19 (R50882) At3g61690 mRNA,
            partial sequence
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cattttatttccatagaaaa 35
            ||||||||||||||||||||
Sbjct: 1463 cattttatttccatagaaaa 1482

>gb|AC149038.2| Medicago truncatula chromosome 7 BAC clone mth2-29a5, complete sequence
          Length = 136566

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tgccaatttacaaaaatcac 87
             ||||||||||||||||||||
Sbjct: 98657 tgccaatttacaaaaatcac 98676

>gb|AY235170.1| Meleagris gallopavo clone MNT-203 microsatellite sequence
          Length = 698

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 ctaaggcttggattcaccaa 138
           ||||||||||||||||||||
Sbjct: 676 ctaaggcttggattcaccaa 657

>emb|BX822852.1|CNS0A64L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB69ZB12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1459

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cattttatttccatagaaaa 35
            ||||||||||||||||||||
Sbjct: 1315 cattttatttccatagaaaa 1334

>dbj|AB186123.1| Bombyx mori Macula-like latent virus orf1, orf2 genes for
            RNA-dependent RNA polymerase, coat protein, complete cds
          Length = 6532

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  cacgccccctttatgctctt 379
            ||||||||||||||||||||
Sbjct: 5183 cacgccccctttatgctctt 5202

>dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T22B15
          Length = 112406

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    catagaaaaatgaacaacac 46
             ||||||||||||||||||||
Sbjct: 31169 catagaaaaatgaacaacac 31150



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    catagaaaaatgaacaacac 46
             ||||||||||||||||||||
Sbjct: 24495 catagaaaaatgaacaacac 24476

>gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83 of 83 of the complete
              sequence
          Length = 491220

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     ctatccattttatttccata 30
              ||||||||||||||||||||
Sbjct: 347318 ctatccattttatttccata 347299

>gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-422n18, complete
              sequence
          Length = 188880

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    actcctcccattcctgcact 350
              ||||||||||||||||||||
Sbjct: 180040 actcctcccattcctgcact 180059

>gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone rp23-407b16, complete
             sequence
          Length = 196249

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   actcctcccattcctgcact 350
             ||||||||||||||||||||
Sbjct: 15014 actcctcccattcctgcact 15033

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 167     gacgccgccttgcgccagcc 186
               ||||||||||||||||||||
Sbjct: 1246964 gacgccgccttgcgccagcc 1246945

>gb|AC161596.2| Mus musculus BAC clone RP23-477K6 from chromosome 9, complete sequence
          Length = 187832

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    attttatttccatagaaaaa 36
             ||||||||||||||||||||
Sbjct: 21917 attttatttccatagaaaaa 21898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,761,333
Number of Sequences: 3902068
Number of extensions: 3761333
Number of successful extensions: 72231
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72133
Number of HSP's gapped (non-prelim): 98
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)