Clone Information

BLAST Search Result

Clone Name	rbart37f04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel bet...	117	9e-27
2	KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subu...	54	7e-08
3	KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subu...	54	7e-08
4	KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subu...	54	7e-08
5	KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subuni...	54	7e-08
6	KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subu...	54	7e-08
7	KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subu...	54	7e-08
8	KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subu...	54	1e-07
9	KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subuni...	52	3e-07
10	KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subu...	52	3e-07
11	KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subu...	52	3e-07
12	KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subu...	52	3e-07
13	KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subu...	50	1e-06
14	KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subu...	50	2e-06
15	KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subu...	47	1e-05
16	KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subuni...	46	2e-05
17	KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subu...	42	3e-04
18	IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protei...	42	3e-04
19	YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ	39	0.003
20	YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)	39	0.003
21	YGHZ_ECOLI (Q46851) Hypothetical protein yghZ	39	0.004
22	NPFF_BOVIN (Q9TUX7) FMRFamide-related peptides precursor [Contai...	38	0.005
23	YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)	38	0.007
24	EWS_MOUSE (Q61545) RNA-binding protein EWS	34	0.095
25	EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing...	34	0.095
26	RESIL_DROME (Q9V7U0) Pro-resilin precursor	33	0.12
27	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	33	0.21
28	FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)	33	0.21
29	RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha...	32	0.36
30	YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)	32	0.47
31	LRP12_MOUSE (Q8BUJ9) Low-density lipoprotein receptor-related pr...	31	0.80
32	YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-)	31	0.80
33	RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri...	30	1.4
34	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	30	1.4
35	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	30	1.4
36	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	30	1.4
37	YDBC_ECOLI (P25906) Putative oxidoreductase ydbC (EC 1.-.-.-)	30	1.4
38	PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-c...	30	1.4
39	OVO_DROME (P51521) Protein ovo (Protein shaven baby)	30	1.4
40	PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subu...	30	1.8
41	LTK_MOUSE (P08923) Leukocyte tyrosine kinase receptor precursor ...	30	1.8
42	SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD...	30	1.8
43	SPAG8_HUMAN (Q99932) Sperm-associated antigen 8 (Sperm membrane ...	30	1.8
44	RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)	29	2.3
45	ZBP1_HUMAN (Q9H171) Z-DNA-binding protein 1 (Tumor stroma and ac...	29	2.3
46	SRCA_HUMAN (Q86TD4) Sarcalumenin precursor	29	2.3
47	TESK1_HUMAN (Q15569) Dual specificity testis-specific protein ki...	29	2.3
48	MAF_HUMAN (O75444) Transcription factor Maf (Proto-oncogene c-maf)	29	3.1
49	DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)	29	3.1
50	RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (...	29	3.1
51	T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-relate...	29	3.1
52	SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C...	29	3.1
53	MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia p...	29	3.1
54	VG48_SHV21 (Q01033) Hypothetical gene 48 protein	29	3.1
55	RS6_RHOCA (O68126) 30S ribosomal protein S6	29	3.1
56	NIFH2_METTH (O26739) Nitrogenase iron protein 2 (EC 1.18.6.1) (N...	24	3.4
57	PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Saliv...	28	4.0
58	PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)	28	4.0
59	PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precur...	28	4.0
60	FBRL_GIALA (Q24957) Fibrillarin	28	4.0
61	YO43_CAEEL (P34681) Hypothetical protein ZK757.3	28	5.2
62	CITE2_HUMAN (Q99967) Cbp/p300-interacting transactivator 2 (MSG-...	28	5.2
63	CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor	28	5.2
64	CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor	28	5.2
65	CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-...	28	5.2
66	CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor	28	5.2
67	PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regu...	28	5.2
68	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	28	5.2
69	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	28	6.8
70	UL61_HCMVA (P16818) Hypothetical protein UL61	28	6.8
71	SYGP1_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synap...	28	6.8
72	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	28	6.8
73	GRPE2_STRAW (Q826F5) Protein grpE 2 (HSP-70 cofactor 2)	28	6.8
74	SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sem...	28	6.8
75	SYC_BACTN (Q8A2F4) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst...	28	6.8
76	KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in ch...	28	6.8
77	A115_TOBAC (P40691) Auxin-induced protein PCNT115	28	6.8
78	SYGP1_RAT (Q9QUH6) Ras GTPase-activating protein SynGAP (Synapti...	28	6.8
79	PUF6_YEAST (Q04373) Protein PUF6	28	6.8
80	NANO1_MOUSE (Q80WY3) Nanos homolog 1	27	8.9
81	HSP70_TRIRU (O93866) Heat shock 70 kDa protein	27	8.9
82	CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor	27	8.9
83	MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)	27	8.9
84	HYPB_AZOVI (P31880) Hydrogenase nickel incorporation protein hypB	27	8.9
85	PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9	27	8.9
86	RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast prec...	27	8.9
87	NOLA1_CAEEL (Q9TYK1) Putative H/ACA ribonucleoprotein complex su...	27	8.9
88	ETV4_MOUSE (P28322) ETS translocation variant 4 (Polyomavirus en...	27	8.9
89	RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U...	27	8.9
90	SYC_BACFR (Q64ZY1) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst...	27	8.9

>KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel beta subunit|
           (K(+) channel beta subunit)
          Length = 328

 Score =  117 bits (292), Expect = 9e-27
 Identities = 61/82 (74%), Positives = 66/82 (80%)
 Frame = -3

Query: 402 TLRKVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXX 223
           TLRKVNGLKPIASELGVS+AQL IAWCASNPNV S+ITGATKE+QIVENMKA        
Sbjct: 247 TLRKVNGLKPIASELGVSLAQLAIAWCASNPNVSSVITGATKENQIVENMKALDVIPLLT 306

Query: 222 XXXXEKIEAVIQSKPKRLELYR 157
               +KIEAV+QSKPKR E YR
Sbjct: 307 PEVVDKIEAVVQSKPKRTESYR 328

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>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L PIA  LG ++ QL +AWC  N  V S++ G++   Q++EN+ A           
Sbjct: 340 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 399

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++++KP   + YR
Sbjct: 400 VNEIDNILRNKPYSKKDYR 418

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>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 408

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L PIA  LG ++ QL +AWC  N  V S++ G++   Q++EN+ A           
Sbjct: 329 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 388

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++++KP   + YR
Sbjct: 389 VNEIDNILRNKPYSKKDYR 407

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>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L PIA  LG ++ QL +AWC  N  V S++ G++   Q++EN+ A           
Sbjct: 340 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 399

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++++KP   + YR
Sbjct: 400 VNEIDNILRNKPYSKKDYR 418

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>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L PIA  LG ++ QL +AWC  N  V S++ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++++KP   + YR
Sbjct: 382 VNEIDNILRNKPYSKKDYR 400

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>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L PIA  LG ++ QL +AWC  N  V S++ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++++KP   + YR
Sbjct: 382 VNEIDNILRNKPYSKKDYR 400

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>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 25/79 (31%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L PIA  LG ++ QL +AWC  N  V S++ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV 381

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++++KP   + YR
Sbjct: 382 VNEIDNILRNKPYSKKDYR 400

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>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 25/79 (31%), Positives = 42/79 (53%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L PIA  LG ++ QL +AWC  N  V S++ G++   Q++EN+ A           
Sbjct: 322 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQVLPKMTSHI 381

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++ +KP   + YR
Sbjct: 382 VNEIDNILGNKPYSKKDYR 400

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>KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L+ IA  LG ++ QL IAWC  N  V S++ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSI 347

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I++++ +KP   + YR
Sbjct: 348 VHEIDSILGNKPYSKKDYR 366

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>KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (Neuroimmune protein
           F5)
          Length = 367

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L+ IA  LG ++ QL IAWC  N  V S++ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSI 347

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I++++ +KP   + YR
Sbjct: 348 VHEIDSILGNKPYSKKDYR 366

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>KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (HKvbeta2)
          Length = 367

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L+ IA  LG ++ QL IAWC  N  V S++ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSI 347

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I++++ +KP   + YR
Sbjct: 348 IHEIDSILGNKPYSKKDYR 366

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>KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 26/79 (32%), Positives = 43/79 (54%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+  L+ IA  LG ++ QL IAWC  N  V S++ GA+   Q++EN+ A           
Sbjct: 288 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQLMENIGAIQVLPKLSSSI 347

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I++++ +KP   + YR
Sbjct: 348 IHEIDSILGNKPYSKKDYR 366

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>KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 25/79 (31%), Positives = 41/79 (51%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           K+   + IA  LG ++ QL IAWC  N  V S++ GA+   Q++EN+ A           
Sbjct: 288 KLKEFQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLLENIGAIQVLPKLSSSI 347

Query: 213 XEKIEAVIQSKPKRLELYR 157
             +I+ ++ +KP   + YR
Sbjct: 348 IHEIDGILGNKPYSKKDYR 366

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>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 404

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 23/72 (31%), Positives = 40/72 (55%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           KV  L P+A +LG ++AQL IAWC  +  V S++ G +   Q++E++ A           
Sbjct: 329 KVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHLGALQVLSQLTPQT 388

Query: 213 XEKIEAVIQSKP 178
             +I+ ++ +KP
Sbjct: 389 VMEIDGLLGNKP 400

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>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 401

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 23/72 (31%), Positives = 37/72 (51%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           KV  L PIA  L  ++ QL IAWC  +  V S++ G +   Q++EN+ A           
Sbjct: 322 KVKELHPIADRLNCTVTQLAIAWCLRSEGVSSVLLGVSNIEQLLENLGAIQVLPHLTPQL 381

Query: 213 XEKIEAVIQSKP 178
             +I+ ++ +KP
Sbjct: 382 VTEIDQILGNKP 393

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>KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3) (RCK beta3)
          Length = 404

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 22/71 (30%), Positives = 40/71 (56%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           +V  L PIA +LG ++AQL IAWC  +  V S++ G +   Q++E++ +           
Sbjct: 329 RVTDLLPIAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLGSLQVLGQLTPQT 388

Query: 213 XEKIEAVIQSK 181
             +I+A++ +K
Sbjct: 389 VMEIDALLGNK 399

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>KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 249

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 393 KVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKAXXXXXXXXXXX 214
           +V  L P A +LG ++ QL IAWC  +  V S++ G +   Q++E++ +           
Sbjct: 174 RVMDLLPTARQLGCTVGQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLGSLQVLSQLTPQT 233

Query: 213 XEKIEAVIQSK 181
             +I+A++ +K
Sbjct: 234 VVEIDALLGNK 244

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>IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protein 147)|
           (VEG147) (AKR11A)
          Length = 310

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 18/50 (36%), Positives = 31/50 (62%)
 Frame = -3

Query: 399 LRKVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMK 250
           +RKVN L PIA +  V +  + +AW  + P +  +I GA +  Q+++N+K
Sbjct: 242 IRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIK 291

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>YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ|
          Length = 346

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = -3

Query: 399 LRKVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKA 247
           L  +  L  +A + G SMAQ+ ++W   +  V S++ GA++  Q+ EN++A
Sbjct: 264 LNSLRLLNEMAQQRGQSMAQMALSWLLKDERVTSVLVGASRAEQLEENVQA 314

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>YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)|
          Length = 310

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/50 (34%), Positives = 30/50 (60%)
 Frame = -3

Query: 399 LRKVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMK 250
           L+KV+ LK +A E     A + +AW  + P + ++I GA +  Q+ +N+K
Sbjct: 242 LKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRPEQLQDNLK 291

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>YGHZ_ECOLI (Q46851) Hypothetical protein yghZ|
          Length = 346

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = -3

Query: 399 LRKVNGLKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKA 247
           L  +  L  +A + G SMAQ+ ++W   +  V S++ GA++  Q+ EN++A
Sbjct: 264 LNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQA 314

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>NPFF_BOVIN (Q9TUX7) FMRFamide-related peptides precursor [Contains:|
           Neuropeptide SF (NPSF); Neuropeptide FF (NPFF);
           Neuropeptide AF (NPAF)]
          Length = 115

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 28/62 (45%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -2

Query: 268 DRGEHEGPGGRPAADSGGPGEDRGGHPEQ-AQAPRVVQMKHSVLSAVQRV-PSPWWDFFP 95
           D    EGPGGR   D     ED G HP Q AQ PR   +  S+L A+QR   SP + F P
Sbjct: 18  DWSHAEGPGGRDGGDQIFMEEDSGAHPAQDAQTPR--SLLRSLLQAMQRPGRSPAFLFQP 75

Query: 94  GR 89
            R
Sbjct: 76  QR 77

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>YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)|
          Length = 324

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 381 LKPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKA 247
           L  ++ ELG + AQ+ +AW  S P + + I G ++E Q+ E + A
Sbjct: 254 LTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNA 298

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>EWS_MOUSE (Q61545) RNA-binding protein EWS|
          Length = 655

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
 Frame = -2

Query: 271 PDRGEHEGPGGR--PAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPWWDFF 98
           P RG   GPGG   P    GG G DRGG P   + PR  +   S    VQ     W    
Sbjct: 468 PLRGGPGGPGGPGGPMGRMGGRGGDRGGFP--PRGPRGSRGNPSGGGNVQHRAGDWQCPN 525

Query: 97  PGRSISLYLVF*NYTWLLLCSRC 29
           PG          N+ W   C++C
Sbjct: 526 PGCGNQ------NFAWRTECNQC 542

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>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma|
           breakpoint region 1 protein)
          Length = 656

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
 Frame = -2

Query: 271 PDRGEHEGPGGR--PAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPWWDFF 98
           P RG   GPGG   P    GG G DRGG P   + PR  +   S    VQ     W    
Sbjct: 469 PLRGGPGGPGGPGGPMGRMGGRGGDRGGFP--PRGPRGSRGNPSGGGNVQHRAGDWQCPN 526

Query: 97  PGRSISLYLVF*NYTWLLLCSRC 29
           PG          N+ W   C++C
Sbjct: 527 PGCGNQ------NFAWRTECNQC 543

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>RESIL_DROME (Q9V7U0) Pro-resilin precursor|
          Length = 620

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = -2

Query: 286 GHQRKPDR-----GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 170
           G  +KP       G   G GGRP++  G PG   GG P  +  P
Sbjct: 274 GQNQKPSDSYGAPGSGNGNGGRPSSSYGAPGSGPGGRPSDSYGP 317



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 271 PDRGEHEGPGGRPAADSGGPGEDRGG 194
           P  G   G GGRP++  G PG+ +GG
Sbjct: 236 PGGGNGNGSGGRPSSSYGAPGQGQGG 261



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 250 GPGGRPAADSGGPGEDRGGHPEQA 179
           GPGGRP+   G PG   GG P  +
Sbjct: 40  GPGGRPSDSYGAPGGGNGGRPSDS 63



 Score = 30.8 bits (68), Expect = 0.80
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 271 PDRGEHEGPGGRPAADSGGPGEDRGGHP 188
           P +G+  G GGR ++  G PG   GG P
Sbjct: 156 PGQGQGNGNGGRSSSSYGAPGGGNGGRP 183



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 262 GEHEGPGGRPAADSGGPGEDRGGHP 188
           G   G GGRP++  G PG   GG P
Sbjct: 92  GGGNGNGGRPSSSYGAPGGGNGGRP 116



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 244 GGRPAADSGGPGEDRGGHP 188
           GGRP++  G PG   GG P
Sbjct: 211 GGRPSSSYGAPGGGNGGRP 229



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 250 GPGGRPAADSGGPGEDRGGHP 188
           G GGRP+   G PG   GG P
Sbjct: 178 GNGGRPSDTYGAPGGGNGGRP 198



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 250 GPGGRPAADSGGPGEDRGGHP 188
           G GGRP+   G PG   GG P
Sbjct: 111 GNGGRPSDTYGAPGGGNGGRP 131

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>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)|
           (Translocated in liposarcoma protein) (POMp75) (75 kDa
           DNA-pairing protein)
          Length = 526

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = -2

Query: 391 SERAQTDRFRARGLDGPAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGG- 215
           S R + ++ +A   DGP G             D RG +   DRG + G GG      GG 
Sbjct: 439 SWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGR 498

Query: 214 PGEDRGG 194
            G DRGG
Sbjct: 499 GGGDRGG 505

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>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)|
          Length = 512

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = -2

Query: 391 SERAQTDRFRARGLDGPAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGG- 215
           S R + ++ +A   DGP G             D RG +   DRG + G GG      GG 
Sbjct: 425 SWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGR 484

Query: 214 PGEDRGG 194
            G DRGG
Sbjct: 485 GGGDRGG 491

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>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -2

Query: 289 RGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKH 149
           R + +K   G   G GG   A SGGPG   GG   Q+Q     Q KH
Sbjct: 414 RPYAKKGPGGARPGTGGPVGARSGGPGRGAGGGQGQSQGQG--QRKH 458

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>YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)|
          Length = 326

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = -3

Query: 378 KPIASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMKA 247
           +P+ +    ++  L +AW     +++S+++GAT   Q+ EN+ A
Sbjct: 261 QPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAA 304

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>LRP12_MOUSE (Q8BUJ9) Low-density lipoprotein receptor-related protein 12|
           precursor
          Length = 858

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -2

Query: 250 GPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPS--PWWDFFPGRSIS 80
           G GG  +A S   G   G      +AP V   +H + SA+ R+     W  F  GRS S
Sbjct: 690 GSGGNSSAQSTRGGHADGREVSSVEAPSVSPARHQLTSALSRMTQGLRWVRFTLGRSSS 748

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>YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-)|
          Length = 306

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 354 VSMAQLGIAWCASNPNVLSMITGATKESQIVENMKA 247
           +SM +  + +  + P V S+ITGA+K  Q+ EN++A
Sbjct: 243 LSMTEKSLQYLLAQPAVASVITGASKIEQLRENIQA 278

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>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 9/39 (23%)
 Frame = -2

Query: 250 GPGGRPAADS---------GGPGEDRGGHPEQAQAPRVV 161
           GPGGRP  D          GG G  RGG P++    RV+
Sbjct: 88  GPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVI 126

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 940

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -2

Query: 298 HDHRGHQRKPDRG-EHEGPGGRPAADSGGPGEDRGGH 191
           H HR H     RG +H GP         GPG   GGH
Sbjct: 857 HGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGH 893

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (MHC class
           I region proline-rich protein CAT53) (FB19 protein)
           (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -2

Query: 298 HDHRGHQRKPDRG-EHEGPGGRPAADSGGPGEDRGGH 191
           H HR H     RG +H GP         GPG   GGH
Sbjct: 857 HGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGH 893

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 925

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -2

Query: 298 HDHRGHQRKPDRG-EHEGPGGRPAADSGGPGEDRGGH 191
           H HR H     RG +H GP         GPG   GGH
Sbjct: 842 HGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGH 878

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>YDBC_ECOLI (P25906) Putative oxidoreductase ydbC (EC 1.-.-.-)|
          Length = 286

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 381 LKPIASELGVSMAQLGIAWCAS-NPNVLSMITGATKESQIVENMKA 247
           L  +A+ LG +  Q+ +AW    +PN+L +I G +  + + ENM A
Sbjct: 223 LSDVAASLGATPMQVALAWLLQRSPNIL-LIPGTSSVAHLRENMAA 267

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>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -2

Query: 271  PDRGEHEGPGGRPAADS-GGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRV 122
            P+ G H G G   +++    PG+ R  HP+ ++ P V +  H   S  Q V
Sbjct: 1158 PECGPHPGTGWDGSSEHLCSPGKSREVHPDSSETPTVAEQVHQPESLSQPV 1208

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>OVO_DROME (P51521) Protein ovo (Protein shaven baby)|
          Length = 1351

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 262 GEHEGPGGRPAADSGGPGEDRGGH 191
           G   GPGG P+A+SGG G   GG+
Sbjct: 585 GGASGPGGGPSANSGGGGGGGGGN 608

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>PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subunit-like|
           protein ST-
          Length = 1019

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = -2

Query: 295 DHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHP 188
           DH    R+P  G HE  G R      GPG  R GHP
Sbjct: 802 DHLRVPRRPGPGRHEEGGRRHQRP--GPGRPRRGHP 835

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>LTK_MOUSE (P08923) Leukocyte tyrosine kinase receptor precursor (EC 2.7.10.1)|
          Length = 888

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 14/55 (25%)
 Frame = -2

Query: 289 RGHQRKPDRGEHE-------------GPGGRPAADSGGPG-EDRGGHPEQAQAPR 167
           R ++R+PDRG  +             G GGR  A  GG G   R   P+  ++PR
Sbjct: 234 RSYRRRPDRGRTQAVPERLETRAAAPGSGGRGGAAGGGSGWTSRAHSPQAGRSPR 288

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>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
 Frame = -2

Query: 271 PDRGEHEGPGGRPAADSGGPG----EDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSP 113
           P  G    PGG P     GPG    EDR G  +Q Q  +  Q +       Q+   P
Sbjct: 803 PPHGPFVRPGGMPGLGGPGPGPGGSEDRDGRQQQPQQQQQQQQQQQQQQQQQQQQPP 859

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>SPAG8_HUMAN (Q99932) Sperm-associated antigen 8 (Sperm membrane protein 1)|
           (SMP-1) (HSD-1) (Sperm membrane protein BS-84)
          Length = 426

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 271 PDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 170
           P  G   GPG  P +   GPG   G HP  A  P
Sbjct: 169 PGSGSGPGPGSGPGS---GPGHGSGSHPGPASGP 199

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>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)|
          Length = 704

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -2

Query: 295 DHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPS 116
           D+ G   +P      G GG  AA   G  EDR GHP  +           V+++ ++ P 
Sbjct: 328 DYTGAAAQPREERTGGIGGYSAA---GTREDRAGHPPGSYTQASAAAPQPVVASARQPPP 384

Query: 115 P 113
           P
Sbjct: 385 P 385

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>ZBP1_HUMAN (Q9H171) Z-DNA-binding protein 1 (Tumor stroma and activated|
           macrophage protein DLM-1)
          Length = 429

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 250 GPGGRPAADSGGPGEDRGGHPEQAQA 173
           GPGG   +  G PGED G  P   Q+
Sbjct: 348 GPGGVAGSGEGEPGEDAGRRPADTQS 373

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>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor|
          Length = 932

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 295 DHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQ 158
           D +  +   D+GE  GP    +A+ GG    + G  E++QAP + +
Sbjct: 257 DTQASEGTEDQGE-PGPAAEASAEPGGAQSVKAGDTEESQAPEMTE 301



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 259 EHEGPGGRPAADSGGPGEDRGGHPEQAQAP 170
           E   PG R   D+ GPGE++ G P  +  P
Sbjct: 104 ESPPPGERDDRDAAGPGEEKNGPPVASALP 133

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>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 626

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 280 QRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRV 122
           +R P RG   GPG  P     GPG   GG P + + P   ++  S +S++ RV
Sbjct: 4   ERPPLRGPGPGPGEVPGEGPPGPG-GTGGGPGRGR-PSSYRVLRSAVSSLARV 54

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>MAF_HUMAN (O75444) Transcription factor Maf (Proto-oncogene c-maf)|
          Length = 403

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = -2

Query: 298 HDHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQA 179
           H   GH   P  G   G  G  AA +GG G   GG P  A
Sbjct: 186 HHAAGHHHHPTAGA-PGAAGSAAASAGGAGGAGGGGPASA 224

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>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)|
          Length = 802

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 265 RGEHEGPGGRPAADSGGPGEDRGGHPEQAQ 176
           RG H  PG +  A+ G  GED GG   + Q
Sbjct: 712 RGRHGPPGQKRKAEDGDGGEDAGGKGRKDQ 741

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>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding|
           protein 56) (TAFII68) (TAF(II)68)
          Length = 592

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -2

Query: 289 RGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGH 191
           RG     DRG + G  G    D GG G DRGG+
Sbjct: 490 RGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGY 522

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>T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-related-inducible|
           leucine zipper protein 2) (Tsc-22-like protein THG-1)
          Length = 395

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = -2

Query: 247 PGGRPAADSGGPGEDRGGHPEQAQAP----RVVQMKHSV 143
           P G P+ D GG G  R G P    AP    RVV++ H +
Sbjct: 44  PNGEPSPDPGGKGTPRNGSPPPG-APSSRFRVVKLPHGL 81

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>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
            SR-like protein RA4)
          Length = 1147

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
 Frame = -2

Query: 271  PDRGEHEGPGGRPAADSGGPG----EDRGGHPEQAQAPR 167
            P  G    PGG P     GPG    EDR G  +  Q P+
Sbjct: 910  PPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 948

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>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
            (Trithorax homolog 2)
          Length = 2715

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 247  PGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPWWDFF 98
            PG R  A +GGP E+   HP   +   ++Q K +     QR   P +D F
Sbjct: 1043 PGPRRGAGAGGPREEVVAHPGPEEQDSLLQRKSARRCVKQR---PSYDIF 1089

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>VG48_SHV21 (Q01033) Hypothetical gene 48 protein|
          Length = 797

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -2

Query: 268 DRGEHEGPGGRPAADSGGPGEDRGGHPE 185
           D GE EG  G    D G  GED G   E
Sbjct: 648 DEGEDEGDEGEDEGDEGDEGEDEGDEGE 675



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -2

Query: 268 DRGEHEGPGGRPAADSGGPGEDRGGHPE 185
           D GE EG  G    D G  GED G   E
Sbjct: 655 DEGEDEGDEGDEGEDEGDEGEDEGDEGE 682



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -2

Query: 268 DRGEHEGPGGRPAADSGGPGEDRGGHPE 185
           D GE EG  G    D G  GED G   E
Sbjct: 603 DEGEDEGDEGDEGEDEGDEGEDEGDEGE 630

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>RS6_RHOCA (O68126) 30S ribosomal protein S6|
          Length = 144

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
 Frame = -2

Query: 280 QRKPDRGEHEGPGGR-------PAADSGGPGEDRGGHPEQ 182
           Q++ DRG+ E  G R       P  D  GP EDRG  PE+
Sbjct: 105 QKRDDRGDREERGDRGDRGDRGPRGDR-GPREDRGPRPER 143

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>NIFH2_METTH (O26739) Nitrogenase iron protein 2 (EC 1.18.6.1) (Nitrogenase|
           component II) (Nitrogenase Fe protein 2) (Nitrogenase
           reductase)
          Length = 265

 Score = 23.9 bits (50), Expect(2) = 3.4
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 155 EALGFIGCAACALPMVGFFPWPVYLPVSG-FLKLYMA 48
           + LG + C   A+P+   F   VY+  SG ++ LY A
Sbjct: 119 DVLGDVVCGGFAVPLREDFADEVYIVTSGEYMSLYAA 155



 Score = 23.5 bits (49), Expect(2) = 3.4
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -2

Query: 277 RKPDRGE--HEGPGGRPAADSGGP 212
           R+PD  E  H G GG    +SGGP
Sbjct: 62  REPDVSEVIHTGFGGVRCVESGGP 85

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>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary|
           proline-rich protein) (Con1 glycoprotein) [Contains:
           Basic peptide P-F] (Fragment)
          Length = 382

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 262 GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 170
           G+ +GP  +   +  GP    GG+P+Q QAP
Sbjct: 330 GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 360

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>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 226 DSGGPGEDRG--GHPEQAQAPRVVQMKHSVLSAVQRVPS 116
           + G P E RG   HP Q Q+P++VQ +  V    Q+  S
Sbjct: 109 EQGKPEEQRGLAKHPSQQQSPKLVQQQGPVKPTPQQTES 147

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>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary|
           proline-rich protein) [Contains: Basic peptide IB-6;
           Peptide P-H]
          Length = 392

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 262 GEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 170
           G+ +GP  +   +  GP    GG+P+Q QAP
Sbjct: 340 GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 370

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>FBRL_GIALA (Q24957) Fibrillarin|
          Length = 327

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -2

Query: 286 GHQRKPDRGEHEGPGGRPAADSGGPGEDRGG 194
           G  R   RG  +GPGGR     GGPG   GG
Sbjct: 62  GPDRGDRRGPRDGPGGR-----GGPGGPGGG 87

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>YO43_CAEEL (P34681) Hypothetical protein ZK757.3|
          Length = 1040

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 274 KPDRGEHEGPGGRPAADSGGPGEDRGG 194
           KP+R    GPGG      GGPG  RGG
Sbjct: 325 KPNRNNPRGPGG-----PGGPGGYRGG 346

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>CITE2_HUMAN (Q99967) Cbp/p300-interacting transactivator 2 (MSG-related protein|
           1) (MRG-1) (P35srj)
          Length = 270

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 12/53 (22%)
 Frame = -2

Query: 292 HRGHQRKPDR------GEHEGPG-GRPAADSG-----GPGEDRGGHPEQAQAP 170
           H   Q++P        GEH   G G   A SG     GPG   GGHP  A AP
Sbjct: 37  HHHQQQQPQHAFNALMGEHIHYGAGNMNATSGIRHAMGPGTVNGGHPPSALAP 89

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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/64 (31%), Positives = 22/64 (34%)
 Frame = -2

Query: 361 ARGLDGPAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQ 182
           ARG +GP G               RG    P      GP G P AD     +   G P  
Sbjct: 349 ARGSEGPQGV--------------RGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGI 394

Query: 181 AQAP 170
           A AP
Sbjct: 395 AGAP 398

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>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/64 (31%), Positives = 22/64 (34%)
 Frame = -2

Query: 361 ARGLDGPAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQ 182
           ARG +GP G               RG    P      GP G P AD     +   G P  
Sbjct: 349 ARGSEGPQGV--------------RGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGI 394

Query: 181 AQAP 170
           A AP
Sbjct: 395 AGAP 398

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>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein|
           1) (MRG-1)
          Length = 269

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 12/53 (22%)
 Frame = -2

Query: 292 HRGHQRKPDR------GEHEGPG-GRPAADSG-----GPGEDRGGHPEQAQAP 170
           H   Q++P        GEH   G G   A SG     GPG   GGHP  A AP
Sbjct: 37  HHHQQQQPQHAFNALMGEHIHYGAGNMNATSGIRHAMGPGTVNGGHPPSALAP 89

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>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/64 (31%), Positives = 22/64 (34%)
 Frame = -2

Query: 361 ARGLDGPAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQ 182
           ARG +GP G               RG    P      GP G P AD     +   G P  
Sbjct: 356 ARGSEGPQGV--------------RGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGI 401

Query: 181 AQAP 170
           A AP
Sbjct: 402 AGAP 405

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>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/60 (30%), Positives = 21/60 (35%)
 Frame = -2

Query: 367 FRARGLDGPAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHP 188
           +R RG  G  G+            DHRGH+       H G GG       G G D    P
Sbjct: 736 YRGRGRGGERGHPGRNGPYGMGHGDHRGHE------GHRGHGGHGDHRGHGHGGDMSTRP 789

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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
 Frame = -2

Query: 256  HEGPGG---RPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPWWDFFPGRS 86
            H+GPG    R     GGP EDRGG       P             QRVP        GRS
Sbjct: 1236 HDGPGTSEHREMEAPGGPSEDRGGKGRGGPGP------------AQRVPK------SGRS 1277

Query: 85   ISL 77
             SL
Sbjct: 1278 SSL 1280

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/67 (26%), Positives = 24/67 (35%)
 Frame = -2

Query: 292  HRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSP 113
            HRGH  +    EH G  G P    GG     GGH            +H ++    R  + 
Sbjct: 868  HRGHDHRGPPHEHRGHDG-PGHGGGGHRGHDGGHSHGGDMSNRPVCRHFMMKGNCRYENN 926

Query: 112  WWDFFPG 92
               + PG
Sbjct: 927  CAFYHPG 933

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>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -2

Query: 286 GHQRKPDRG-EHEGPGGRPAADSGGPGEDRGGHPEQAQAP 170
           G    P RG E   PG RP A  G PG  R   P    AP
Sbjct: 306 GRGGTPGRGPERAAPGARPTAPDGAPG--RWDGPADGPAP 343

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>SYGP1_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synaptic|
            Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1)
            (Neuronal RasGAP)
          Length = 1328

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = -2

Query: 271  PDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSP 113
            P R    GPGG     SGG G   GG P   Q  +  Q+    +SA Q+ P P
Sbjct: 1026 PQRPAPSGPGGGSGGGSGGGG---GGQPPPLQRGKSQQL---TVSAAQK-PRP 1071

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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/72 (29%), Positives = 25/72 (34%)
 Frame = -2

Query: 385 RAQTDRFRARGLDGPAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGGPGE 206
           + +T    ARG +GP G               RG    P      GP G P AD     +
Sbjct: 341 KGETGPQGARGSEGPQG--------------SRGEPGPPGPAGAAGPAGNPGADGQPGAK 386

Query: 205 DRGGHPEQAQAP 170
              G P  A AP
Sbjct: 387 GATGAPGIAGAP 398

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>GRPE2_STRAW (Q826F5) Protein grpE 2 (HSP-70 cofactor 2)|
          Length = 203

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -2

Query: 274 KPDRGE--HEGPGGRPAADSGGPGEDRGG 194
           +P RG+    GP  RP A +G PG D  G
Sbjct: 25  RPPRGDLPQPGPPARPEATNGEPGPDAAG 53

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>SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 930

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 217 GPGEDRGGHPEQAQAPRVV 161
           GPG  RGGH     APRV+
Sbjct: 731 GPGRSRGGHAAGGPAPRVL 749

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>SYC_BACTN (Q8A2F4) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 493

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = -2

Query: 274 KPDRGEHEGP-GGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPWWDFF 98
           K ++  H G   GR   D      D  G  E+         K +    + R PSPW D F
Sbjct: 160 KYNKDYHYGKLSGRNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGF 219

Query: 97  PG 92
           PG
Sbjct: 220 PG 221

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>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X|
          Length = 462

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -2

Query: 298 HDHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVV 161
           HDH GH    +   H G     A D  G   +  GH   A++ + V
Sbjct: 96  HDHHGHSHDEEEDHHHG----HAHDHHGHSHEDHGHSHGAESAKQV 137

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>A115_TOBAC (P40691) Auxin-induced protein PCNT115|
          Length = 307

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 372 IASELGVSMAQLGIAWCASNPNVLSMITGATKESQIVENMK 250
           +A   G + +QL +AW     N +  I G TK   + +NMK
Sbjct: 262 MAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNMK 302

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>SYGP1_RAT (Q9QUH6) Ras GTPase-activating protein SynGAP (Synaptic|
            Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1)
            (Neuronal RasGAP) (p135 SynGAP)
          Length = 1293

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = -2

Query: 271  PDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSP 113
            P R    GPGG     SGG G   GG P   Q  +  Q+    +SA Q+ P P
Sbjct: 1026 PQRPAPSGPGGGSGGGSGGGG---GGQPPPLQRGKSQQL---TVSAAQK-PRP 1071

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>PUF6_YEAST (Q04373) Protein PUF6|
          Length = 656

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -2

Query: 268 DRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPW 110
           D  EHE             G + G H EQ +  +  +M+    + VQ++ S W
Sbjct: 79  DSEEHENENEEKEGKDKSEGGENGNHTEQRKLLKERKMQRKSGTQVQQIKSVW 131

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>NANO1_MOUSE (Q80WY3) Nanos homolog 1|
          Length = 267

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -2

Query: 277 RKPDRGE-HEGPGGRPAADSGGPGED 203
           R  DRG  HEGPG   A  + GP ED
Sbjct: 55  RASDRGSPHEGPGPTAAGPTMGPPED 80

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>HSP70_TRIRU (O93866) Heat shock 70 kDa protein|
          Length = 654

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 262 GEHEGPGGRPAADSGGPG 209
           GE   PGG P A +GGPG
Sbjct: 614 GEGGAPGGFPGAGAGGPG 631

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>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 292  HRGHQRKPDRGEHEGPGGRPAADSGGPGED-RGGHP 188
            H G Q  P      GP G PA  SG  G+D R GHP
Sbjct: 1037 HHGDQGAPGSVGPAGPRG-PAGPSGPAGKDGRTGHP 1071

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>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)|
          Length = 1147

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -2

Query: 250  GPG-GRPAADSGGPGEDRGG 194
            GPG G P A  GGPG  RGG
Sbjct: 978  GPGMGGPGAGRGGPGMGRGG 997

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>HYPB_AZOVI (P31880) Hydrogenase nickel incorporation protein hypB|
          Length = 303

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -2

Query: 298 HDHRGHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMK 152
           HDH  H+    R         PAA  GGP    G  P +A AP + Q +
Sbjct: 23  HDHHHHEHPFVRRPAPAEAAPPAA--GGPNLHFGQGPARAHAPGLSQSR 69

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>PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9|
          Length = 705

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 29/115 (25%), Positives = 35/115 (30%), Gaps = 13/115 (11%)
 Frame = -2

Query: 379 QTDRFRARGLDG--PAGYXXXXXXXXXXVHDHRGHQRKPDRGEHEGPGGRPAADSGGPGE 206
           Q +R  +RG  G  P GY              RG    P  G   GP        G PG 
Sbjct: 317 QNERLNSRGRGGMPPGGY--------------RGRGGFPGPGRGGGPPQNGRGGYGPPGR 362

Query: 205 DRGGH-----------PEQAQAPRVVQMKHSVLSAVQRVPSPWWDFFPGRSISLY 74
            RGG+           P   + P              R PSP   + PG  +  Y
Sbjct: 363 GRGGYGPPPRGYGGPGPRGGRGP----PPQGYQGGPDRRPSPGAPYGPGPGVGTY 413

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>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor|
          Length = 1783

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 280 QRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAP 170
           +R+P  G+    G  PAA   GP +  GG    A AP
Sbjct: 219 EREPQAGKPRASGRAPAAPGVGPQDVGGGSGACAPAP 255

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>NOLA1_CAEEL (Q9TYK1) Putative H/ACA ribonucleoprotein complex subunit 1-like|
           protein
          Length = 244

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -2

Query: 271 PDRGEHEGPGGRP-AADSGGPGEDRGG 194
           P  G   G GGR    D GG G DRGG
Sbjct: 147 PQAGGGRGRGGRGRGGDRGGRGSDRGG 173

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>ETV4_MOUSE (P28322) ETS translocation variant 4 (Polyomavirus enhancer|
           activator 3) (PEA3 protein)
          Length = 555

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -2

Query: 286 GHQRKPDRGEHEGPGGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPWW 107
           GH   P     + PG + +A + GPG   GG     +     +MK   L   QRVP  + 
Sbjct: 42  GHAEHPPAAPAQTPGPQVSASARGPGPVAGGSGRMER-----RMKGGYLD--QRVPYTFC 94

Query: 106 DFFPG 92
              PG
Sbjct: 95  SKSPG 99

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>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 437

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 289 RGHQRKPDRGEHEGPGGRPAADSGGPGEDRG 197
           R   R+  RGE     GR  A  GG G+D G
Sbjct: 372 RDRDREHKRGERGSERGRDEARGGGGGQDNG 402

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>SYC_BACFR (Q64ZY1) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 491

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = -2

Query: 274 KPDRGEHEGP-GGRPAADSGGPGEDRGGHPEQAQAPRVVQMKHSVLSAVQRVPSPWWDFF 98
           K ++  H G   GR   D      +  G  E+         K +    + R PSPW D F
Sbjct: 160 KYNKDHHYGKLSGRNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGF 219

Query: 97  PG 92
           PG
Sbjct: 220 PG 221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,004,226
Number of Sequences: 219361
Number of extensions: 1079020
Number of successful extensions: 4415
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 3891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4374
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result