ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016511.1| Zea mays clone Contig344 mRNA sequence 100 6e-18
2gb|AY105383.1| Zea mays PCO086901 mRNA sequence 100 6e-18
3ref|XM_463936.1| Oryza sativa (japonica cultivar-group), mRNA 84 4e-13
4ref|XM_506697.1| PREDICTED Oryza sativa (japonica cultivar-group... 84 4e-13
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
6dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
7dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
8dbj|AK104885.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
9dbj|AK070168.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
10gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 46 0.082
11ref|NM_127698.2| Arabidopsis thaliana oxidoreductase AT2G21260 m... 44 0.33
12gb|AC125327.4| Mus musculus BAC clone RP23-346B17 from chromosom... 44 0.33
13gb|AF362516.1| Campoletis sonorensis ichnovirus segment I2, comp... 44 0.33
14gb|AC007142.7| Arabidopsis thaliana chromosome 2 clone F7O24 map... 44 0.33
15gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map... 44 0.33
16gb|AY086136.1| Arabidopsis thaliana clone 21730 mRNA, complete s... 44 0.33
17gb|AC154016.2| Mus musculus 6 BAC RP24-146M9 (Roswell Park Cance... 44 0.33
18emb|CT010437.15| Mouse DNA sequence from clone RP23-333O22 on ch... 44 0.33
19emb|BX890572.9| Zebrafish DNA sequence from clone CH211-234F20 i... 42 1.3
20gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, com... 42 1.3
21gb|AC007730.3| Arabidopsis thaliana chromosome 2 BAC T5M2 genomi... 42 1.3
22gb|AC007143.5| Arabidopsis thaliana chromosome 2 BAC T17H1 genom... 42 1.3
23gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Canc... 42 1.3
24emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome 42 1.3
25ref|NM_127697.2| Arabidopsis thaliana oxidoreductase AT2G21250 t... 40 5.1
26ref|NM_201774.1| Arabidopsis thaliana oxidoreductase AT2G21250 t... 40 5.1
27ref|XM_370336.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 5.1
28gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
29gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 5.1
30ref|XM_798375.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.1
31gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosom... 40 5.1
32gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosom... 40 5.1
33gb|AC146570.6| Medicago truncatula clone mth2-103j7, complete se... 40 5.1
34ref|XM_789224.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.1
35emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, ... 40 5.1
36emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BA... 40 5.1
37emb|AJ297357.1|HSA297357 Homo sapiens partial LIMD1 gene for LIM... 40 5.1
38gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, comp... 40 5.1
39gb|AY093239.1| Arabidopsis thaliana putative NADPH-dependent man... 40 5.1
40gb|AC098476.2| Homo sapiens chromosome 3 clone RP11-697K23, comp... 40 5.1
41dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
42emb|BX819032.1|CNS0AADI Arabidopsis thaliana Full-length cDNA Co... 40 5.1
43emb|BX819536.1|CNS0A9XO Arabidopsis thaliana Full-length cDNA Co... 40 5.1
44emb|BX818952.1|CNS0A9UL Arabidopsis thaliana Full-length cDNA Co... 40 5.1
45emb|BX821103.1|CNS0A9AE Arabidopsis thaliana Full-length cDNA Co... 40 5.1
46gb|AC158184.2| Selaginella moellendorffii clone JGIASXY-5E21, co... 40 5.1
47gb|AC097713.3| Homo sapiens BAC clone RP11-251I17 from 2, comple... 40 5.1
48dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
49dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
50emb|BX294114.8| Zebrafish DNA sequence from clone DKEY-152J12 in... 40 5.1
51gb|AC163645.5| Mus musculus BAC clone RP23-206F16 from chromosom... 40 5.1
52gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 5.1
53gb|BT001243.1| Arabidopsis thaliana putative NADPH-dependent man... 40 5.1
54emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chr... 40 5.1
55gb|AC117789.17| Mus musculus chromosome 1, clone RP24-548D18, co... 40 5.1 
>gb|BT016511.1| Zea mays clone Contig344 mRNA sequence
          Length = 1381

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                       
Query: 296 aagcgtagaggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcga 355
           |||| |||||||||||||||||||||||||| |||||||| || |||||  | |||||||
Sbjct: 967 aagcatagaggtcgatgccccagaacttggcaggctggttagtccggtacttccggtcga 908

                                     
Query: 356 gggccttcatcttctccatgtcctcg 381
            |||||||||| ||||||||||||||
Sbjct: 907 cggccttcatcctctccatgtcctcg 882
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>gb|AY105383.1| Zea mays PCO086901 mRNA sequence
          Length = 1311

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                        
Query: 296  aagcgtagaggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcga 355
            |||| |||||||||||||||||||||||||| |||||||| || |||||  | |||||||
Sbjct: 1022 aagcatagaggtcgatgccccagaacttggcaggctggttagtccggtacttccggtcga 963

                                      
Query: 356  gggccttcatcttctccatgtcctcg 381
             |||||||||| ||||||||||||||
Sbjct: 962  tggccttcatcctctccatgtcctcg 937
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>ref|XM_463936.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1261

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 304  aggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcgagggccttc 363
            |||||||| |||||||||||||| |||||||||||||||||  | ||||||| ||   ||
Sbjct: 1080 aggtcgattccccagaacttggcaggctggttggtgcggtacttccggtcgatggatctc 1021

                              
Query: 364  atcttctccatgtcctcg 381
            ||||||||||||||||||
Sbjct: 1020 atcttctccatgtcctcg 1003
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>ref|XM_506697.1| PREDICTED Oryza sativa (japonica cultivar-group), P0575F10.14 mRNA
          Length = 1395

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 304  aggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcgagggccttc 363
            |||||||| |||||||||||||| |||||||||||||||||  | ||||||| ||   ||
Sbjct: 1120 aggtcgattccccagaacttggcaggctggttggtgcggtacttccggtcgatggatctc 1061

                              
Query: 364  atcttctccatgtcctcg 381
            ||||||||||||||||||
Sbjct: 1060 atcttctccatgtcctcg 1043
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                           
Query: 304     aggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcgagggccttc 363
               |||||||| |||||||||||||| |||||||||||||||||  | ||||||| ||   ||
Sbjct: 1227583 aggtcgattccccagaacttggcaggctggttggtgcggtacttccggtcgatggatctc 1227642

                                 
Query: 364     atcttctccatgtcctcg 381
               ||||||||||||||||||
Sbjct: 1227643 atcttctccatgtcctcg 1227660
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>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 304   aggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcgagggccttc 363
             |||||||| |||||||||||||| |||||||||||||||||  | ||||||| ||   ||
Sbjct: 58674 aggtcgattccccagaacttggcaggctggttggtgcggtacttccggtcgatggatctc 58733

                               
Query: 364   atcttctccatgtcctcg 381
             ||||||||||||||||||
Sbjct: 58734 atcttctccatgtcctcg 58751
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>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0018H03, complete sequence
          Length = 94450

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                        
Query: 304  aggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcgagggccttc 363
            |||||||| |||||||||||||| |||||||||||||||||  | ||||||| ||   ||
Sbjct: 1612 aggtcgattccccagaacttggcaggctggttggtgcggtacttccggtcgatggatctc 1671

                              
Query: 364  atcttctccatgtcctcg 381
            ||||||||||||||||||
Sbjct: 1672 atcttctccatgtcctcg 1689
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>dbj|AK104885.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A06, full
            insert sequence
          Length = 1261

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 304  aggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcgagggccttc 363
            |||||||| |||||||||||||| |||||||||||||||||  | ||||||| ||   ||
Sbjct: 1080 aggtcgattccccagaacttggcaggctggttggtgcggtacttccggtcgatggatctc 1021

                              
Query: 364  atcttctccatgtcctcg 381
            ||||||||||||||||||
Sbjct: 1020 atcttctccatgtcctcg 1003
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>dbj|AK070168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042M07, full
            insert sequence
          Length = 1395

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 304  aggtcgatgccccagaacttggccggctggttggtgcggtagctgcggtcgagggccttc 363
            |||||||| |||||||||||||| |||||||||||||||||  | ||||||| ||   ||
Sbjct: 1120 aggtcgattccccagaacttggcaggctggttggtgcggtacttccggtcgatggatctc 1061

                              
Query: 364  atcttctccatgtcctcg 381
            ||||||||||||||||||
Sbjct: 1060 atcttctccatgtcctcg 1043
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>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH081N08, complete sequence
          Length = 56991

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 294  tcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
            |||||||||||| || || ||||| ||||||||||| ||||| || |||||
Sbjct: 4148 tcaagcgtagagatcaatcccccaaaacttggccggttggttcgtacggta 4198
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>ref|NM_127698.2| Arabidopsis thaliana oxidoreductase AT2G21260 mRNA, complete cds
          Length = 1110

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 293  atcaagcgtagaggtcgatgccccagaacttggc 326
            ||||||||||||| || |||||||| ||||||||
Sbjct: 1003 atcaagcgtagagctcaatgccccaaaacttggc 970
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>gb|AC125327.4| Mus musculus BAC clone RP23-346B17 from chromosome 6, complete sequence
          Length = 224846

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 357   ggccttcatcttctccatgtcc 378
             ||||||||||||||||||||||
Sbjct: 42078 ggccttcatcttctccatgtcc 42099
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>gb|AF362516.1| Campoletis sonorensis ichnovirus segment I2, complete sequence
          Length = 8864

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 8    ttttcacttttcactttttcag 29
            ||||||||||||||||||||||
Sbjct: 5736 ttttcacttttcactttttcag 5757
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>gb|AC007142.7| Arabidopsis thaliana chromosome 2 clone F7O24 map mi238, complete
            sequence
          Length = 20078

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 293  atcaagcgtagaggtcgatgccccagaacttggc 326
            ||||||||||||| || |||||||| ||||||||
Sbjct: 3349 atcaagcgtagagctcaatgccccaaaacttggc 3316



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 293  atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
            ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 5634 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 5583
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>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete
            sequence
          Length = 125045

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 293  atcaagcgtagaggtcgatgccccagaacttggc 326
            ||||||||||||| || |||||||| ||||||||
Sbjct: 2732 atcaagcgtagagctcaatgccccaaaacttggc 2765



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 293 atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
           ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 447 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 498
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>gb|AY086136.1| Arabidopsis thaliana clone 21730 mRNA, complete sequence
          Length = 1093

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 293  atcaagcgtagaggtcgatgccccagaacttggc 326
            ||||||||||||| || |||||||| ||||||||
Sbjct: 1003 atcaagcgtagagctcaatgccccaaaacttggc 970
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>gb|AC154016.2| Mus musculus 6 BAC RP24-146M9 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 159862

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 357   ggccttcatcttctccatgtcc 378
             ||||||||||||||||||||||
Sbjct: 17688 ggccttcatcttctccatgtcc 17667
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>emb|CT010437.15| Mouse DNA sequence from clone RP23-333O22 on chromosome 17, complete
              sequence
          Length = 172696

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 117    tgtctggttttcctgaagatac 138
              ||||||||||||||||||||||
Sbjct: 127608 tgtctggttttcctgaagatac 127629
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>emb|BX890572.9| Zebrafish DNA sequence from clone CH211-234F20 in linkage group 4
             Contains the gene for a novel protein containing two notch
             (DSL) domains and an EF hand domain, the gene for a novel
             protein similar to vertebrate myosin binding protein H
             (MYBPH), the gene for a novel protein sinilar to human and
             mouse CWF19-like 1, cell cycle control (S. pombe)
             (CWF19L1), the gene for a novel protein (zgc:55718), the
             gene for a novel protein containing Kelch motifs and a
             BTB/POZ domain, the sycp3 gene for synaptonemal complex
             protein 3, a novel gene and a CpG island, complete
             sequence
          Length = 166208

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     tgttttcacttttcacttttt 26
             |||||||||||||||||||||
Sbjct: 90068 tgttttcacttttcacttttt 90048
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>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence
          Length = 187669

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   attgtgctgcaaatacaacat 211
             |||||||||||||||||||||
Sbjct: 35124 attgtgctgcaaatacaacat 35104
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>gb|AC007730.3| Arabidopsis thaliana chromosome 2 BAC T5M2 genomic sequence, complete
             sequence
          Length = 94302

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    tcactttttcaggcaatggaa 38
             |||||||||||||||||||||
Sbjct: 20161 tcactttttcaggcaatggaa 20141
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>gb|AC007143.5| Arabidopsis thaliana chromosome 2 BAC T17H1 genomic sequence, complete
             sequence
          Length = 75812

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    tcactttttcaggcaatggaa 38
             |||||||||||||||||||||
Sbjct: 31575 tcactttttcaggcaatggaa 31595
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>gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92128

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 191   attgtgctgcaaatacaacat 211
             |||||||||||||||||||||
Sbjct: 47932 attgtgctgcaaatacaacat 47952
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>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome
          Length = 366924

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     tcactttttcaggcaatggaa 38
              |||||||||||||||||||||
Sbjct: 242866 tcactttttcaggcaatggaa 242846
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>ref|NM_127697.2| Arabidopsis thaliana oxidoreductase AT2G21250 transcript variant
            AT2G21250.1 mRNA, complete cds
          Length = 1202

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 293  atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
            ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 1002 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 951
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>ref|NM_201774.1| Arabidopsis thaliana oxidoreductase AT2G21250 transcript variant
            AT2G21250.2 mRNA, complete cds
          Length = 1279

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 293  atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
            ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 1063 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 1012
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>ref|XM_370336.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG06833.4) partial mRNA
          Length = 2883

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 361  ttcatcttctccatgtcctc 380
            ||||||||||||||||||||
Sbjct: 2330 ttcatcttctccatgtcctc 2311
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>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0028C22, complete sequence
          Length = 154228

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      gttttcacttttcacttttt 26
              ||||||||||||||||||||
Sbjct: 135680 gttttcacttttcacttttt 135699
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 326     ccggctggttggtgcggtag 345
               ||||||||||||||||||||
Sbjct: 2755631 ccggctggttggtgcggtag 2755650
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>ref|XM_798375.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.160.0670)
            partial mRNA
          Length = 8934

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   cactttttcaggcaatggaa 38
            ||||||||||||||||||||
Sbjct: 8781 cactttttcaggcaatggaa 8762
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>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete sequence
          Length = 174497

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ttttcacttttcactttttc 27
              ||||||||||||||||||||
Sbjct: 165553 ttttcacttttcactttttc 165534
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>gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosome 1, complete sequence
          Length = 205642

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   gaatgaaccaggcatgactcagca 167
             ||||||||||| ||||||||||||
Sbjct: 13040 gaatgaaccagtcatgactcagca 13017
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>gb|AC146570.6| Medicago truncatula clone mth2-103j7, complete sequence
          Length = 122623

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      gttttcacttttcacttttt 26
              ||||||||||||||||||||
Sbjct: 100202 gttttcacttttcacttttt 100221
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>ref|XM_789224.1| PREDICTED: Strongylocentrotus purpuratus similar to
           mitogen-activated protein kinase associated protein 1
           isoform 3 (LOC589585), mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 tgccccagaacttggccggc 330
           ||||||||||||||||||||
Sbjct: 490 tgccccagaacttggccggc 471
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>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32
          Length = 198788

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tgttttcacttttcactttt 25
             ||||||||||||||||||||
Sbjct: 54464 tgttttcacttttcactttt 54483
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>emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BAC clone F25E4 (ESSA project)
          Length = 80019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tgttttcacttttcactttt 25
             ||||||||||||||||||||
Sbjct: 75815 tgttttcacttttcactttt 75834
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>emb|AJ297357.1|HSA297357 Homo sapiens partial LIMD1 gene for LIM domains containing protein 1
             and KIAA0851 gene
          Length = 87434

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ttttcacttttcactttttc 27
             ||||||||||||||||||||
Sbjct: 10884 ttttcacttttcactttttc 10903
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>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence
          Length = 245991

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tcactttttcaggcaatgga 37
              ||||||||||||||||||||
Sbjct: 106559 tcactttttcaggcaatgga 106540
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>gb|AY093239.1| Arabidopsis thaliana putative NADPH-dependent mannose 6-phosphate
           reductase (At2g21250) mRNA, complete cds
          Length = 1159

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 293 atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
           ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 981 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 930
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>gb|AC098476.2| Homo sapiens chromosome 3 clone RP11-697K23, complete sequence
          Length = 176741

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ttttcacttttcactttttc 27
             ||||||||||||||||||||
Sbjct: 16248 ttttcacttttcactttttc 16267
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 7        gttttcacttttcacttttt 26
                ||||||||||||||||||||
Sbjct: 19808413 gttttcacttttcacttttt 19808432
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>emb|BX819032.1|CNS0AADI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB39ZC12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 923

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 293 atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
           ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 781 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 730
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>emb|BX819536.1|CNS0A9XO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB88ZC02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1276

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 293  atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
            ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 1051 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 1000
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>emb|BX818952.1|CNS0A9UL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB30ZB06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1154

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 293 atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
           ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 978 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 927
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>emb|BX821103.1|CNS0A9AE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL15ZF08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1134

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 293 atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
           ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 991 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 940
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>gb|AC158184.2| Selaginella moellendorffii clone JGIASXY-5E21, complete sequence
          Length = 37165

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  gttcgaccttgtctggtttt 127
            ||||||||||||||||||||
Sbjct: 2482 gttcgaccttgtctggtttt 2501
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>gb|AC097713.3| Homo sapiens BAC clone RP11-251I17 from 2, complete sequence
          Length = 173790

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 126    ttcctgaagatactgggagaatga 149
              ||||||||||| ||||||||||||
Sbjct: 111151 ttcctgaagattctgggagaatga 111128
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gttttcacttttcacttttt 26
             ||||||||||||||||||||
Sbjct: 32853 gttttcacttttcacttttt 32872
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0450E05
          Length = 176553

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      gttttcacttttcacttttt 26
              ||||||||||||||||||||
Sbjct: 154099 gttttcacttttcacttttt 154118
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>emb|BX294114.8| Zebrafish DNA sequence from clone DKEY-152J12 in linkage group 1,
             complete sequence
          Length = 195651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     tttcacttttcactttttca 28
             ||||||||||||||||||||
Sbjct: 63660 tttcacttttcactttttca 63641
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>gb|AC163645.5| Mus musculus BAC clone RP23-206F16 from chromosome 10, complete
             sequence
          Length = 212773

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     ttttcacttttcactttttc 27
             ||||||||||||||||||||
Sbjct: 61226 ttttcacttttcactttttc 61207
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     cgagctcccatattattgat 260
               ||||||||||||||||||||
Sbjct: 2182057 cgagctcccatattattgat 2182076
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>gb|BT001243.1| Arabidopsis thaliana putative NADPH-dependent mannose 6-phosphate
           reductase (At2g21250) mRNA, complete cds
          Length = 993

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 293 atcaagcgtagaggtcgatgccccagaacttggccggctggttggtgcggta 344
           ||||||||||||| || |||  ||| |||||||| || ||||| ||||||||
Sbjct: 931 atcaagcgtagagatcaatgttccaaaacttggctggttggttcgtgcggta 880
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>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete
             sequence
          Length = 208153

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     gtgttttcacttttcactttttca 28
             |||||||| |||||||||||||||
Sbjct: 43849 gtgttttcccttttcactttttca 43872
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>gb|AC117789.17| Mus musculus chromosome 1, clone RP24-548D18, complete sequence
          Length = 180733

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    gaatgaaccaggcatgactcagca 167
              ||||||||||| ||||||||||||
Sbjct: 102382 gaatgaaccagtcatgactcagca 102359


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,165,139
Number of Sequences: 3902068
Number of extensions: 3165139
Number of successful extensions: 74329
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74186
Number of HSP's gapped (non-prelim): 143
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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