ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart37e10 |
|---|---|
| Clone Library Name | barley_pub |
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 176 bits (446), Expect = 3e-44 Identities = 82/106 (77%), Positives = 93/106 (87%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVDSEG RLKG RFSVGSGS YAYG+LD GYK++M+VEEA+ELARRAIYHAT+RDGASG Sbjct: 167 YYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASG 226 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQEMAEAPSA 183 G VSVY+VGPDGWKK++GDDVG+LH+ YYPV A VEQEM E A Sbjct: 227 GVVSVYHVGPDGWKKVTGDDVGDLHFQYYPVVPATVEQEMVEVVGA 272
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 176 bits (445), Expect = 4e-44 Identities = 82/103 (79%), Positives = 90/103 (87%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVD+EG RLKG RFSVGSGS YAYG+LD GYK++MSVEEA+ELARR+IYHATFRDGASG Sbjct: 169 YYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASG 228 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQEMAEA 192 G SVY+VGP+GW KLSGDDVGELHYHYYPV A EQ M EA Sbjct: 229 GVASVYHVGPEGWTKLSGDDVGELHYHYYPVAPATAEQVMEEA 271
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 172 bits (436), Expect = 5e-43 Identities = 81/103 (78%), Positives = 87/103 (84%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVD+EG RLKG RFSVGSGS YAYG+LD GYKF+MSVEEA+ELARR+IYHATFRDGASG Sbjct: 169 YYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASG 228 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHYYPVQAAPVEQEMAEA 192 G SVY+VGP GW KLSGDDVGELHYHYYPV E M EA Sbjct: 229 GVASVYHVGPQGWTKLSGDDVGELHYHYYPVAPITAEHVMEEA 271
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 119 bits (299), Expect = 3e-27 Identities = 54/91 (59%), Positives = 71/91 (78%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVDSEG R+ G+ FSVGSGS+YAYG++D GY +++ VEEA +LARRAIY AT+RD SG Sbjct: 116 YYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSG 175 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHYYPV 228 G V++Y+V DGW ++S D+V +LH Y V Sbjct: 176 GAVNLYHVREDGWIRVSSDNVADLHDKYSSV 206
>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) (Proteasome subunit MB1) Length = 208 Score = 118 bits (296), Expect = 8e-27 Identities = 52/88 (59%), Positives = 70/88 (79%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVDSEG R+ G+ FSVGSGS+YAYG++D GY +++ VE+A +LARRAIY AT+RD SG Sbjct: 116 YYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSG 175 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHY 237 G V++Y+V DGW ++S D+V +LH Y Sbjct: 176 GAVNLYHVREDGWIRVSSDNVADLHEKY 203
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 117 bits (294), Expect = 1e-26 Identities = 52/88 (59%), Positives = 70/88 (79%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVDSEG R+ G+ FSVGSGS+YA+G++D GY +++ VEEA +LARRAIY AT+RD SG Sbjct: 116 YYVDSEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSG 175 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHY 237 G V++Y+V DGW ++S D+V +LH Y Sbjct: 176 GAVNLYHVREDGWIRVSSDNVADLHDKY 203
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 109 bits (272), Expect = 5e-24 Identities = 52/88 (59%), Positives = 65/88 (73%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVDSEG R+ G F+VGSGS YAYG+LD G + +M+ +EA ELARRAI+ A RD SG Sbjct: 167 YYVDSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSG 226 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHY 237 G V+VY+VGP GW+++S DV LH Y Sbjct: 227 GSVTVYHVGPRGWRRVSSHDVAGLHDGY 254
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 103 bits (258), Expect = 2e-22 Identities = 48/88 (54%), Positives = 62/88 (70%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVD G RL G+ FS GSGS YAYG++D GY+ ++S EEA EL RRAI +AT RD SG Sbjct: 184 YYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSG 243 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHY 237 G +++Y++ DGW K+ DV EL + Y Sbjct: 244 GIINMYHMKEDGWVKVESTDVNELLHQY 271
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 103 bits (256), Expect = 3e-22 Identities = 47/88 (53%), Positives = 61/88 (69%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVD G RL G FS GSG+ YAYG++D GY+ ++S EEA +L RRAI +AT RD SG Sbjct: 184 YYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSG 243 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHY 237 G V++Y++ DGW K+ DV +L Y Y Sbjct: 244 GVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 103 bits (256), Expect = 3e-22 Identities = 47/88 (53%), Positives = 62/88 (70%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVD G RL G+ FS GSG+ YAYG++D GY+ N+S EEA +L RRAI +AT RD SG Sbjct: 184 YYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSG 243 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHY 237 G V++Y++ DGW K+ DV +L + Y Sbjct: 244 GVVNMYHMKEDGWVKVESTDVSDLLHQY 271
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 102 bits (255), Expect = 4e-22 Identities = 47/88 (53%), Positives = 62/88 (70%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVD G RL G FS GSG+ YAYG++D GY+ ++S EEA +LARRAI +AT RD SG Sbjct: 184 YYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSG 243 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHYHY 237 G V++Y++ DGW K+ DV +L + Y Sbjct: 244 GVVNMYHMKKDGWVKVESTDVSDLLHKY 271
>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)| (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2) (Multicatalytic endopeptidase complex subunit PRE2) Length = 287 Score = 96.3 bits (238), Expect = 4e-20 Identities = 46/86 (53%), Positives = 59/86 (68%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YYVDS+G RLKG F VGSG +AYG+LD YK+++SVE+A L +R+I A RD SG Sbjct: 188 YYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSG 247 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELHY 243 G V++Y+V DGW DVGEL + Sbjct: 248 GSVNLYHVTEDGWIYHGNHDVGELFW 273
>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome component pts1) (Macropain subunit pts1) (Multicatalytic endopeptidase complex subunit pts1) Length = 272 Score = 94.0 bits (232), Expect = 2e-19 Identities = 44/84 (52%), Positives = 60/84 (71%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YY+DS+G RLKG FSVGSGS +AYG+LD GY++++S +EA LA+R+I AT RD SG Sbjct: 173 YYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSG 232 Query: 320 GCVSVYYVGPDGWKKLSGDDVGEL 249 G V++Y++ +GW DV L Sbjct: 233 GSVNLYHIDENGWVFHGNFDVDSL 256
>PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (Proteasome| component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) (Fragment) Length = 104 Score = 78.2 bits (191), Expect = 1e-14 Identities = 33/56 (58%), Positives = 44/56 (78%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRD 333 YYVD G RL G+ FS GSG+ YAYG++D G+++++S+EEA +L RRAI HAT RD Sbjct: 49 YYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 65.5 bits (158), Expect = 8e-11 Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 1/82 (1%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSV-GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGAS 324 Y +D+ G ++ +R S GSGS AYG+L++ Y+ NM+V+E +LA RAI++AT RD AS Sbjct: 121 YSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSAS 180 Query: 323 GGCVSVYYVGPDGWKKLSGDDV 258 G + V + + +K+L ++V Sbjct: 181 GENIDVVVITKEAFKRLDPEEV 202
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 56.2 bits (134), Expect = 5e-08 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Frame = -1 Query: 500 YYVDSEGARLKGSRF-SVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGAS 324 Y +D G ++ + GSGSL AYG+L++ + + V+EA ELA RAIY A RD AS Sbjct: 123 YSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSAS 182 Query: 323 GGCVSVYYVGPDGWKKLSGDDVGEL 249 G + V + D + + S ++V ++ Sbjct: 183 GDGIDVVKITEDEFYQYSPEEVEQI 207
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 55.5 bits (132), Expect = 8e-08 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 + +D+ G ++ S GSGS + YG+L+ Y M+V+E +L RAI A RD ASG Sbjct: 119 FSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASG 178 Query: 320 GCVSVYYV-GPDGWKKLSGDDV 258 G + V + DG+ +L D + Sbjct: 179 GMIDVAVITRKDGYVQLPTDQI 200
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 54.7 bits (130), Expect = 1e-07 Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG--WKK 276 GSGS Y YG D+ +K M+ EEA +L A+ A RDGASGG V + DG K Sbjct: 142 GSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTVTINKDGATRKF 201 Query: 275 LSGDDVGELHYHYYPVQA 222 SGD + H PV + Sbjct: 202 YSGDSLQLWHEELEPVNS 219
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/81 (38%), Positives = 46/81 (56%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y VD G + + GSG +AY ILD YK N+++EE +LA +AI A RD SG Sbjct: 121 YSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSG 180 Query: 320 GCVSVYYVGPDGWKKLSGDDV 258 + V + +G+K+LS ++ Sbjct: 181 DGILVVTITKEGYKELSDSEL 201
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 53.5 bits (127), Expect = 3e-07 Identities = 26/55 (47%), Positives = 34/55 (61%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG 285 GSGS Y YG D+ +K NM+ EEA +L +A+ A RDGASGG V + +G Sbjct: 141 GSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEG 195
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 51.2 bits (121), Expect = 2e-06 Identities = 27/69 (39%), Positives = 41/69 (59%) Frame = -1 Query: 455 SVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWKK 276 + GSGS AYG+L+ GY +MSVEE +LA A+ A RD SG +S+ + DG K Sbjct: 135 ATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVKI 194 Query: 275 LSGDDVGEL 249 +++ ++ Sbjct: 195 FEDEEIEKI 203
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWKK 276 GSGS + YG D ++ NM+ EEA E + A+ A RDG+SGG + + + DG ++ Sbjct: 153 GSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGMER 210
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 50.1 bits (118), Expect = 3e-06 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y +D G + S GSGS AYG+L++ Y + V+EA ++A RAI A RD SG Sbjct: 121 YSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSG 180 Query: 320 GCVSVYYV-GPDGWKKLSGDDV 258 + V V +G++ LS +++ Sbjct: 181 NGILVATVTEEEGFRMLSEEEI 202
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 47.8 bits (112), Expect = 2e-05 Identities = 28/84 (33%), Positives = 46/84 (54%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 + VD G + + + GSG +AY ILD Y+ MSV + +LA +AI A RD +G Sbjct: 121 FSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTG 180 Query: 320 GCVSVYYVGPDGWKKLSGDDVGEL 249 + V + DG+K+ G ++ ++ Sbjct: 181 DGLLVVTITKDGYKEYRGAELEKM 204
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/77 (33%), Positives = 41/77 (53%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y VD G + + GSG +AY +LD Y+ ++ V E ++A AI A RD SG Sbjct: 121 YSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSG 180 Query: 320 GCVSVYYVGPDGWKKLS 270 + V + +G+++LS Sbjct: 181 DGIMVVTITEEGYRELS 197
>PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG--WKK 276 GSGS Y YG +D YK M+ EE AI A RDG+SGG + + + DG + Sbjct: 148 GSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTITADGVDHRV 207 Query: 275 LSGDDVGELH 246 + GD++ + + Sbjct: 208 ILGDELPKFY 217
>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 239 Score = 46.6 bits (109), Expect = 4e-05 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y V G ++ S GSGS Y YG +D Y+ M+ EE + A+ A RDG+SG Sbjct: 146 YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSG 205 Query: 320 GCVSVYYVGPDGWKK--LSGDDV 258 G + + + G ++ L GD + Sbjct: 206 GVIRLAAIAESGVERQVLLGDQI 228
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/61 (39%), Positives = 39/61 (63%) Frame = -1 Query: 455 SVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWKK 276 + GSGS A G+L++ Y M+++EAA+LA+RA++ A RD +G V V + G ++ Sbjct: 140 ATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKGHEE 199 Query: 275 L 273 L Sbjct: 200 L 200
>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) (Proteasome chain 5) Length = 238 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y V G ++ S GSGS Y YG +D Y+ M+ +E + A+ A RDG+SG Sbjct: 145 YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSG 204 Query: 320 GCVSVYYVGPDGWKK--LSGDDV 258 G + + + G ++ L GD + Sbjct: 205 GVIRLAAIQQSGVERQVLLGDQI 227
>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 238 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y V G ++ S GSGS Y YG +D Y+ M+ +E + A+ A RDG+SG Sbjct: 145 YSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSG 204 Query: 320 GCVSVYYVGPDGWKK--LSGDDV 258 G + + + G ++ L GD + Sbjct: 205 GVIRLAAIQESGVERQVLLGDQI 227
>PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG--WKK 276 GSGS Y YG +D YK M+ EE AI A RDG+SGG + + + G + Sbjct: 148 GSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGVDHRV 207 Query: 275 LSGDDVGELH 246 + GD++ + + Sbjct: 208 ILGDELPKFY 217
>PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG--WKK 276 GSGS Y YG +D YK M+ EE AI A RDG+SGG + + + G + Sbjct: 148 GSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGVDHRV 207 Query: 275 LSGDDVGELH 246 + GD++ + + Sbjct: 208 ILGDELPKFY 217
>PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) (LMP-2d) Length = 219 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG--WKK 276 GSGS Y YG +D YK M+ EE AI A RDG+SGG + + + G + Sbjct: 148 GSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGVDHRV 207 Query: 275 LSGDDVGELH 246 + GD++ + + Sbjct: 208 ILGDELPKFY 217
>PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 482 GARLKGSRFSVG-SGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCV 312 G L F++G SGS + YG +D YK MS EE AI A RDG+SGG + Sbjct: 136 GGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVI 193
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 43.9 bits (102), Expect = 2e-04 Identities = 24/84 (28%), Positives = 45/84 (53%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 + D GA + ++G G A + +E Y+ +M+++EA ELA RA+Y A+ R+ + Sbjct: 151 FETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEAS-REETTA 209 Query: 320 GCVSVYYVGPDGWKKLSGDDVGEL 249 + + V G++KL + E+ Sbjct: 210 DNLEIAVVDKQGFRKLERKKIEEM 233
>PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/46 (47%), Positives = 26/46 (56%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCV 312 GSGS Y YG +D YK M+ EE AI A RDG+SGG + Sbjct: 148 GSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVI 193
>PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/46 (47%), Positives = 26/46 (56%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCV 312 GSGS Y YG +D YK M+ EE AI A RDG+SGG + Sbjct: 148 GSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSGGVI 193
>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)| (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) Length = 215 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWKKL 273 GSGS + YG D+ ++ NMS EE + + ++ A DG+SGG + + + G ++L Sbjct: 147 GSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERL 205
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 41.2 bits (95), Expect = 0.002 Identities = 26/81 (32%), Positives = 41/81 (50%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y D GA ++GSG A I +E YK +MS+EEA +LA A+ + A Sbjct: 150 YETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPSAEN 209 Query: 320 GCVSVYYVGPDGWKKLSGDDV 258 V++ V ++KLS +++ Sbjct: 210 IEVAIITVKDKKFRKLSREEI 230
>PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG 285 GSGS Y YG +D Y+ MS E+ + + A RDG+SGG + + G Sbjct: 146 GSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTIDEKG 200
>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 39.7 bits (91), Expect = 0.005 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -1 Query: 482 GARLKGSRFSVG-SGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGG 318 G L F++G SGS Y YG +D Y+ M+ EE + + A RDG+SGG Sbjct: 134 GGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGG 189
>PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = -1 Query: 449 GSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDG 285 GSGS Y YG +D Y+ MS E+ + + A RDG+SGG + + G Sbjct: 146 GSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTIDEKG 200
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 39.3 bits (90), Expect = 0.006 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 + + + G+ G S+GSGSL A +L+ +K +++ EEA +LA AI + D SG Sbjct: 140 FSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSG 199 Query: 320 GCVSV 306 V V Sbjct: 200 SNVDV 204
>PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-1) (Proteasome component GB) Length = 204 Score = 36.2 bits (82), Expect = 0.051 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAI 354 YY+D K + + G GS ++ +D Y+ +MSVEEA EL + I Sbjct: 115 YYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163
>PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-2) (Proteasome component GA) Length = 199 Score = 36.2 bits (82), Expect = 0.051 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAI 354 YY+D K + + G GS ++ +D Y+ +MSVEEA EL + I Sbjct: 115 YYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163
>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC| 3.4.25.1) Length = 267 Score = 35.0 bits (79), Expect = 0.11 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 + + + G+ K ++GSGSL A +L+ Y+ ++ EA EL + AI F D SG Sbjct: 146 FTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSG 205
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 35.0 bits (79), Expect = 0.11 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y + G+ K ++GSGSL A + ++ ++ +M EEA +L AI F D SG Sbjct: 154 YSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSG 213 Query: 320 GCVSV 306 + + Sbjct: 214 SNIDL 218
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 35.0 bits (79), Expect = 0.11 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y + G+ K ++GSGSL A + ++ ++ +M EEA +L AI F D SG Sbjct: 154 YSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSG 213 Query: 320 GCVSV 306 + + Sbjct: 214 SNIDL 218
>PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit beta-4) Length = 212 Score = 34.7 bits (78), Expect = 0.15 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFR 336 YY+D K + + G GS + ++D+ Y+ +MSVEEA +L + I R Sbjct: 115 YYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLR 169
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 34.7 bits (78), Expect = 0.15 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y + G+ K ++GSGSL A + ++ ++ +M EEA L AI F D SG Sbjct: 154 YSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSG 213 Query: 320 GCVSV 306 + + Sbjct: 214 SNIDL 218
>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 210 Score = 34.3 bits (77), Expect = 0.19 Identities = 22/85 (25%), Positives = 38/85 (44%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 +Y+DS GA + G GS++ IL + +S E+A L ++ + R + Sbjct: 118 HYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQ 177 Query: 320 GCVSVYYVGPDGWKKLSGDDVGELH 246 VY V G +K+ + G L+ Sbjct: 178 RNFEVYVVDSKGMRKMEAINPGSLN 202
>PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 258 Score = 33.5 bits (75), Expect = 0.33 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIY 351 Y D G ++GSG A + ++ Y+ +MS+EEA +LA + +Y Sbjct: 154 YRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILY 203
>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 33.5 bits (75), Expect = 0.33 Identities = 23/74 (31%), Positives = 35/74 (47%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y V G+ + ++GSG A +L++ ++ NM++E A EL AI D SG Sbjct: 150 YEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSG 209 Query: 320 GCVSVYYVGPDGWK 279 G V + G K Sbjct: 210 GNVDACVITAGGAK 223
>PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 259 Score = 33.1 bits (74), Expect = 0.43 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHAT 342 + D GA ++ ++GSG A +L+ Y NM+V E ELA A+ T Sbjct: 151 FETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTT 203
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 33.1 bits (74), Expect = 0.43 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 455 SVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSV 306 ++GSGSL A + + YK ++ +E +L AI F D SG V + Sbjct: 165 TMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDI 214
>PSMA_PYRAE (Q8ZVM1) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 243 Score = 32.7 bits (73), Expect = 0.56 Identities = 22/84 (26%), Positives = 39/84 (46%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y D G + ++G+ S L++ YKF+M + E ELA +A+ A ++ Sbjct: 150 YQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALKALASAVEITDSAN 209 Query: 320 GCVSVYYVGPDGWKKLSGDDVGEL 249 V+ + +K+S D+V L Sbjct: 210 VEVAYATIEEKKMRKMSQDEVASL 233
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 32.0 bits (71), Expect = 0.95 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -1 Query: 455 SVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSV 306 ++GSGSL A + + YK ++ +E +L +I F D SG V + Sbjct: 165 TMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDI 214
>PSMA_METTH (O26782) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 248 Score = 31.6 bits (70), Expect = 1.2 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHAT 342 + D GA ++ ++G+G A ++ Y +M++ +A ELA A+Y AT Sbjct: 150 FETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEAT 202
>AT8B3_HUMAN (O60423) Probable phospholipid-transporting ATPase IK (EC 3.6.3.1)| (ATPase class I type 8B member 3) Length = 1310 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +2 Query: 176 RLTRKGPRPSLARREPPGPGSSGSAALRHHLRTASSIRQGQ 298 R TR GP PS A PPGPG +G + + + IR G+ Sbjct: 10 RSTRAGPEPSPA---PPGPGDTGDSDVTQEGSGPAGIRGGE 47
>PSMA_METTE (Q59565) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 247 Score = 31.2 bits (69), Expect = 1.6 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 + D GA L+ ++G+G + + YK +M++E A L A+Y A +G Sbjct: 148 FETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAEGKFDAG 207 Query: 320 GC-VSVYYVGPDGWKKLSGDDVG 255 V V + ++KL ++VG Sbjct: 208 TLEVGVVSLQDKKFRKLEPEEVG 230
>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 30.8 bits (68), Expect = 2.1 Identities = 22/76 (28%), Positives = 35/76 (46%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y V G+ + ++GSG A +L++ ++ NM++E A L A+ D SG Sbjct: 150 YGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSG 209 Query: 320 GCVSVYYVGPDGWKKL 273 G V + G K L Sbjct: 210 GNVDACVITKTGAKLL 225
>DTD_THET8 (Q5SJQ9) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 152 Score = 30.0 bits (66), Expect = 3.6 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +2 Query: 122 GGKQAPKSKFTGFRTT*IRLTRKGPRPSLARREPPGPGSS-GSAALRHHLRTASSIRQGQ 298 GG+ S+FT + T RKG RPS A+ PP G AAL L+ + G Sbjct: 70 GGEVLLVSQFTLYADT-----RKGNRPSFAKAAPPDQGKRLYEAALEAFLQQGVHVETGV 124 Query: 299 RSTH*R 316 H R Sbjct: 125 YGAHMR 130
>DTD_THET2 (Q72K35) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 152 Score = 30.0 bits (66), Expect = 3.6 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +2 Query: 122 GGKQAPKSKFTGFRTT*IRLTRKGPRPSLARREPPGPGSS-GSAALRHHLRTASSIRQGQ 298 GG+ S+FT + T RKG RPS A+ PP G AAL L+ + G Sbjct: 70 GGEVLLVSQFTLYADT-----RKGNRPSFAKAAPPDQGKRLYEAALEAFLQQGVHVETGV 124 Query: 299 RSTH*R 316 H R Sbjct: 125 YGAHMR 130
>PSB2_RAT (P40307) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 29.6 bits (65), Expect = 4.7 Identities = 22/72 (30%), Positives = 30/72 (41%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YY+D A K + G G+ ILD Y +S E A EL R+ + R + Sbjct: 116 YYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNL 175 Query: 320 GCVSVYYVGPDG 285 SV + DG Sbjct: 176 PTFSVRVIDKDG 187
>PSB2_MOUSE (Q9R1P3) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 29.6 bits (65), Expect = 4.7 Identities = 22/72 (30%), Positives = 30/72 (41%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 YY+D A K + G G+ ILD Y +S E A EL R+ + R + Sbjct: 116 YYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNL 175 Query: 320 GCVSVYYVGPDG 285 SV + DG Sbjct: 176 PTFSVRVIDKDG 187
>PY_DICLA (Q9PT98) Peptide Y precursor| Length = 97 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 11/57 (19%) Frame = +2 Query: 203 SLARREPPGPGSSGS-----------AALRHHLRTASSIRQGQRSTH*RSRHWLRHG 340 S A PP P S GS AA+RH++ + R G+RST ++ WL G Sbjct: 24 SFADAYPPKPESPGSNASPEDWAKYHAAVRHYVNLITRQRYGKRSTPEQAVAWLLFG 80
>PSB2_HUMAN (P49721) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 29.3 bits (64), Expect = 6.2 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAI 354 YY+D A K + G G+ ILD Y +S E A EL R+ + Sbjct: 116 YYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCL 164
>FLB3_CAMJE (Q46114) Flagellin B| Length = 574 Score = 29.3 bits (64), Expect = 6.2 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -1 Query: 497 YVDSEGARLK-GSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y+ S G+ GS FSVGSG Y+ G+ +++ A++L+ A+Y+ + G S Sbjct: 399 YMSSTGSGFSSGSGFSVGSGKNYS-----TGFANTIAISAASQLS--AVYNVSAGSGFSS 451 Query: 320 G 318 G Sbjct: 452 G 452
>FLA3_CAMJE (Q46113) Flagellin A| Length = 574 Score = 29.3 bits (64), Expect = 6.2 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -1 Query: 497 YVDSEGARLK-GSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 Y+ S G+ GS FSVGSG Y+ G+ +++ A++L+ A+Y+ + G S Sbjct: 399 YMSSTGSGFSSGSGFSVGSGKNYS-----TGFANTIAISAASQLS--AVYNVSAGSGFSS 451 Query: 320 G 318 G Sbjct: 452 G 452
>ENGC_SYNEL (Q8DK79) Probable GTPase engC (EC 3.6.1.-)| Length = 348 Score = 29.3 bits (64), Expect = 6.2 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 7/68 (10%) Frame = +2 Query: 155 GFRTT*IRLTR----KGPRPSLARREPP--GPGSSGSAALRHHLRTASSIRQGQRSTH-* 313 G+R + LT+ + RP LA + GP G ++L HL IR G S H Sbjct: 142 GYRCHVLSLTQGIAWQALRPHLANKITVVCGPSGVGKSSLIRHLTPREDIRVGAVSDHWH 201 Query: 314 RSRHWLRH 337 R RH RH Sbjct: 202 RGRHTTRH 209
>PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) (20S proteasome alpha subunit) Length = 261 Score = 29.3 bits (64), Expect = 6.2 Identities = 19/84 (22%), Positives = 41/84 (48%) Frame = -1 Query: 500 YYVDSEGARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASG 321 + D GA ++ ++GSG +L++ Y+ +++++E ELA A+ A Sbjct: 150 FETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDIKPEN 209 Query: 320 GCVSVYYVGPDGWKKLSGDDVGEL 249 V + V +KK+ +++ +L Sbjct: 210 VDVCIITVKDAQFKKIPVEEIKKL 233
>PDE3A_RAT (Q62865) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC| 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A) Length = 1141 Score = 28.9 bits (63), Expect = 8.1 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 98 RGEH*CRGGGKQAPKSKFTGFRTT*IRLTRKGPRPSLA 211 RG+H CRGG +P+ +R ++ R+ P+ S A Sbjct: 26 RGDHRCRGGSPSSPRGSGCCWRALALQPLRRSPQLSSA 63
>5HT3R_CAVPO (O70212) 5-hydroxytryptamine 3 receptor precursor (5-HT-3)| (Serotonin-gated ion channel receptor) (5-HT3R) Length = 490 Score = 28.9 bits (63), Expect = 8.1 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +2 Query: 197 RPSLARREPPGPGSSGSAALRHHLRTASSIR---QGQRSTH*RSRHWLRHGTLHDK 355 + S R PP P S A+ L+ +SIR + + T +R WLR G++ DK Sbjct: 408 KTSRGRGSPPPPPREASLAMCGLLQELASIRHFLEKREETREVARDWLRVGSVLDK 463
>CUF1_SCHPO (Q09728) Metal-binding regulatory protein cuf1| Length = 411 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 380 LPQLTC*ICNPHPRYHKHIESQNQQRTGFP*ALHPHYQHS 499 + +LT + P P Y+ +++S QQ T FP + +Y HS Sbjct: 172 IEKLTSNVAYP-PNYNNYLKSPYQQPTNFPPEIQYNYSHS 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,566,513 Number of Sequences: 219361 Number of extensions: 1274184 Number of successful extensions: 3906 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 3756 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3903 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
