ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart37e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY736119.1| Triticum aestivum 20S proteasome beta 5 subunit m... 502 e-139
2gb|BT016601.1| Zea mays clone Contig434 mRNA sequence 206 5e-50
3gb|AY103704.1| Zea mays PCO130904 mRNA sequence 206 5e-50
4dbj|AK104520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
5dbj|AK104361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
6dbj|AK071652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
7dbj|AB026567.1| Oryza sativa (japonica cultivar-group) OsPBE1 mR... 204 2e-49
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
10ref|NM_101176.2| Arabidopsis thaliana PBE1; endopeptidase/ pepti... 80 8e-12
11gb|AY150473.1| Arabidopsis thaliana proteasome epsilon chain pre... 80 8e-12
12gb|AY050871.1| Arabidopsis thaliana putative proteasome epsilon ... 80 8e-12
13gb|AF348579.1| Arabidopsis thaliana clone C00191 (e) putative pr... 80 8e-12
14emb|BX815505.1|CNS0ABBC Arabidopsis thaliana Full-length cDNA Co... 80 8e-12
15emb|BX841869.1|CNS09Y42 Arabidopsis thaliana Full-length cDNA Co... 80 8e-12
16emb|AJ011383.1|CAR011383 Cicer arietinum mRNA for 20S proteasome... 78 3e-11
17gb|AF323592.1|AF323592 Prunus persica putative 20S proteasome be... 76 1e-10
18emb|Y13695.1|ATY13695 Arabidopsis thaliana mRNA for proteasome s... 72 2e-09
19gb|AF043536.1|AF043536 Arabidopsis thaliana 20S proteasome beta ... 72 2e-09
20emb|BX814144.1|CNS0AC2D Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
21gb|AY089104.1| Arabidopsis thaliana clone 33591 mRNA, complete s... 62 2e-06
22gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 ... 58 3e-05
23gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete s... 56 1e-04
24emb|AJ291741.1|NTA291741 Nicotiana tabacum partial mRNA for puta... 52 0.002
25gb|DQ450069.1| Arachis hypogaea clone 6A4R2G 20S proteasome beta... 48 0.028
26ref|XM_787263.1| PREDICTED: Strongylocentrotus purpuratus simila... 48 0.028
27ref|NM_001037612.1| Bos taurus proteasome (prosome, macropain) s... 48 0.028
28gb|BC110039.1| Bos taurus cDNA clone MGC:134464 IMAGE:8048388, c... 48 0.028
29ref|XM_537370.2| PREDICTED: Canis familiaris similar to proteaso... 46 0.11
30dbj|D78172.1| Spinacia oleracea mRNA for 26S proteasome beta sub... 46 0.11
31ref|XM_959619.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.43
32ref|XM_324730.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.43
33gb|AC010655.7| Homo sapiens chromosome 7 clone RP11-155G14, comp... 42 1.7
34gb|AY169345.1| Aeromonas schubertii strain CECT 4254 RNA polymer... 40 6.8
35gb|AY169344.1| Aeromonas enteropelogenes strain CECT 4255 RNA po... 40 6.8
36gb|AY169341.1| Aeromonas jandaei strain CECT 4228 RNA polymerase... 40 6.8
37gb|AY169336.1| Aeromonas schubertii strain CECT 4240 RNA polymer... 40 6.8
38gb|AY249198.1| Aeromonas enteropelogenes CECT 4935 RNA polymeras... 40 6.8
39gb|AY249196.1| Aeromonas jandaei 344 RNA polymerase sigma-70 fac... 40 6.8
40gb|AY646195.1| Canis familiaris tyrosine kinase receptor ron mRN... 40 6.8
41gb|AC147216.3| Pan troglodytes BAC clone RP43-156I12 from 7, com... 40 6.8
42gb|AY518886.1| Brassica napus putative proteasome 20S beta5 subu... 40 6.8
43gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, co... 40 6.8
44gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome... 40 6.8
45ref|XM_533823.2| PREDICTED: Canis familiaris tyrosine kinase rec... 40 6.8
46gb|AY314773.1| Caenorhabditis elegans flamingo-like protein FMI-... 40 6.8
47gb|AC153588.11| Mus musculus 6 BAC RP23-430H2 (Roswell Park Canc... 40 6.8
48emb|AL512412.7| Human DNA sequence from clone RP11-49H10 on chro... 40 6.8
49gb|AY127866.1| Aeromonas trota RNA polymerase sigma factor D gen... 40 6.8
50gb|AY127864.1| Aeromonas schubertii RNA polymerase sigma factor ... 40 6.8
51gb|AY127861.1| Aeromonas jandaei RNA polymerase sigma factor D g... 40 6.8
52emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom... 40 6.8
53gb|AE014180.1| Mus musculus piebald deletion region section 8 of... 40 6.8
54dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.8
55dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 6.8
56gb|AC160973.4| Mus musculus BAC clone RP24-171J16 from chromosom... 40 6.8
57ref|NM_073855.2| Caenorhabditis elegans F15B9.7 (cadherin) mRNA,... 40 6.8
58dbj|BS000135.1| Pan troglodytes chromosome 22 clone:RP43-114M01,... 40 6.8
59dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20,... 40 6.8
60emb|Z78018.1|CEW07G4 Caenorhabditis elegans Cosmid W07G4, comple... 40 6.8
61emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 6.8
62dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.8
63dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.8 
>gb|AY736119.1| Triticum aestivum 20S proteasome beta 5 subunit mRNA, complete cds
          Length = 860

 Score =  502 bits (253), Expect = e-139
 Identities = 316/337 (93%)
 Strand = Plus / Minus

                                                                       
Query: 164 acgacatgaatcaggttgacgcggaaggggcctcggccatctcttgctcgacgggagccg 223
           ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 859 acgacatcaatcaggttgacgcagaaggggcctcggccatctcttgctcgacaggagccg 800

                                                                       
Query: 224 cctggaccgggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttcc 283
           ||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct: 799 cctggactgggtagtagtggtagtgcagctctccaacatcatctccagacaacttcttcc 740

                                                                       
Query: 284 atccgtcagggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacg 343
           | |||||||||||||| ||||| |||||||| ||||| ||||| |||||||||||||| |
Sbjct: 739 agccgtcagggccaacatagtagacactaacacagccaccactagctccgtcacggaatg 680

                                                                       
Query: 344 ttgcatgataaatagccctccgtgctaactcagcagcttcctcaactgacatgttgaatt 403
           |||| || |||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgcgtggtaaatagcccgccgagctaactcagcagcttcctcaactgacatgttgaatt 620

                                                                       
Query: 404 tgtaaccctcatccaagataccataagcatatagagagccagaaccaacagagaaccggc 463
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 619 tgtaaccctcgtccaagataccataagcatatagagagccagaaccaacagagaatcggc 560

                                                
Query: 464 ttcccttgagccttgcaccctcactatcaacatagta 500
           |||||||||||||||||||||| ||||||||||||||
Sbjct: 559 ttcccttgagccttgcaccctcgctatcaacatagta 523
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>gb|BT016601.1| Zea mays clone Contig434 mRNA sequence
          Length = 1072

 Score =  206 bits (104), Expect = 5e-50
 Identities = 230/272 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 accgggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccg 288
           |||||||||||||||||||||||||| ||||||||||| || || |||||| |||| || 
Sbjct: 852 accgggtagtagtggtagtgcagctccccgacatcatccccagaaagcttcgtccaacca 793

                                                                       
Query: 289 tcagggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgca 348
           ||||||||||||| ||| |||||||| || || ||||| ||| | |||||||| ||||| 
Sbjct: 792 tcagggccaacgtggtaaacactaacacaaccaccacttgctgcatcacggaatgttgcc 733

                                                                       
Query: 349 tgataaatagccctccgtgctaactcagcagcttcctcaactgacatgttgaatttgtaa 408
             |||||||||||  || ||||| || || |||||||||||||||||| ||||   ||||
Sbjct: 732 ccataaatagcccgtcgcgctaattcggctgcttcctcaactgacatgctgaagcggtaa 673

                                                                       
Query: 409 ccctcatccaagataccataagcatatagagagccagaaccaacagagaaccggcttccc 468
           || ||||||||||||||||||||||| || || ||||| ||||||||||||| | | |||
Sbjct: 672 ccatcatccaagataccataagcatacagtgaaccagagccaacagagaacctgttcccc 613

                                           
Query: 469 ttgagccttgcaccctcactatcaacatagta 500
             |||||  ||||||||||| |||||||||||
Sbjct: 612 acgagccgcgcaccctcactgtcaacatagta 581
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>gb|AY103704.1| Zea mays PCO130904 mRNA sequence
          Length = 1115

 Score =  206 bits (104), Expect = 5e-50
 Identities = 230/272 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 accgggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccg 288
           |||||||||||||||||||||||||| ||||||||||| || || |||||| |||| || 
Sbjct: 877 accgggtagtagtggtagtgcagctccccgacatcatccccagaaagcttcgtccaacca 818

                                                                       
Query: 289 tcagggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgca 348
           ||||||||||||| ||| |||||||| || || ||||| ||| | |||||||| ||||| 
Sbjct: 817 tcagggccaacgtggtaaacactaacacaaccaccacttgctgcatcacggaatgttgcc 758

                                                                       
Query: 349 tgataaatagccctccgtgctaactcagcagcttcctcaactgacatgttgaatttgtaa 408
             |||||||||||  || ||||| || || |||||||||||||||||| ||||   ||||
Sbjct: 757 ccataaatagcccgtcgcgctaattcggctgcttcctcaactgacatgctgaagcggtaa 698

                                                                       
Query: 409 ccctcatccaagataccataagcatatagagagccagaaccaacagagaaccggcttccc 468
           || ||||||||||||||||||||||| || || ||||| ||||||||||||| | | |||
Sbjct: 697 ccatcatccaagataccataagcatacagtgaaccagagccaacagagaacctgttcccc 638

                                           
Query: 469 ttgagccttgcaccctcactatcaacatagta 500
             |||||  ||||||||||| |||||||||||
Sbjct: 637 acgagccgcgcaccctcactgtcaacatagta 606
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>dbj|AK104520.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E06, full
           insert sequence
          Length = 1099

 Score =  204 bits (103), Expect = 2e-49
 Identities = 259/311 (83%)
 Strand = Plus / Minus

                                                                       
Query: 190 ggggcctcggccatctcttgctcgacgggagccgcctggaccgggtagtagtggtagtgc 249
           ||||| |||||||| || |||||||| ||||  ||||  ||||||||||| | |||||||
Sbjct: 880 ggggcatcggccatttcctgctcgacaggagtggcctcaaccgggtagtacttgtagtgc 821

                                                                       
Query: 250 agctctccgacatcatctccggacagcttcttccatccgtcagggccaacgtagtacaca 309
           ||||| || ||||||||||| || |||||| |||| ||||  |||||||| | ||| || 
Sbjct: 820 agctccccaacatcatctccagaaagcttcgtccagccgttcgggccaacatggtaaacg 761

                                                                       
Query: 310 ctaacgcagccgccactggctccgtcacggaacgttgcatgataaatagccctccgtgct 369
           ||||| || || ||||| || || |||||||| || || || |||||||||| || ||||
Sbjct: 760 ctaacacaaccaccacttgccccatcacggaatgtagcttggtaaatagcccgccttgct 701

                                                                       
Query: 370 aactcagcagcttcctcaactgacatgttgaatttgtaaccctcatccaagataccataa 429
           |||||||||||||||||||||| |||     |   ||||||||| |||||||||||||| 
Sbjct: 700 aactcagcagcttcctcaactggcatcacatagcggtaaccctcgtccaagataccatag 641

                                                                       
Query: 430 gcatatagagagccagaaccaacagagaaccggcttcccttgagccttgcaccctcacta 489
           ||||| ||||| || || ||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 640 gcatacagagaacctgatccaacagagaatcggcttcccatgagccttgcgccctcacta 581

                      
Query: 490 tcaacatagta 500
           |||||||||||
Sbjct: 580 tcaacatagta 570
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>dbj|AK104361.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C04, full
           insert sequence
          Length = 1099

 Score =  204 bits (103), Expect = 2e-49
 Identities = 259/311 (83%)
 Strand = Plus / Minus

                                                                       
Query: 190 ggggcctcggccatctcttgctcgacgggagccgcctggaccgggtagtagtggtagtgc 249
           ||||| |||||||| || |||||||| ||||  ||||  ||||||||||| | |||||||
Sbjct: 880 ggggcatcggccatttcctgctcgacaggagtggcctcaaccgggtagtacttgtagtgc 821

                                                                       
Query: 250 agctctccgacatcatctccggacagcttcttccatccgtcagggccaacgtagtacaca 309
           ||||| || ||||||||||| || |||||| |||| ||||  |||||||| | ||| || 
Sbjct: 820 agctccccaacatcatctccagaaagcttcgtccagccgttcgggccaacatggtaaacg 761

                                                                       
Query: 310 ctaacgcagccgccactggctccgtcacggaacgttgcatgataaatagccctccgtgct 369
           ||||| || || ||||| || || |||||||| || || || |||||||||| || ||||
Sbjct: 760 ctaacacaaccaccacttgccccatcacggaatgtagcttggtaaatagcccgccttgct 701

                                                                       
Query: 370 aactcagcagcttcctcaactgacatgttgaatttgtaaccctcatccaagataccataa 429
           |||||||||||||||||||||| |||     |   ||||||||| |||||||||||||| 
Sbjct: 700 aactcagcagcttcctcaactggcatcacatagcggtaaccctcgtccaagataccatag 641

                                                                       
Query: 430 gcatatagagagccagaaccaacagagaaccggcttcccttgagccttgcaccctcacta 489
           ||||| ||||| || || ||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 640 gcatacagagaacctgatccaacagagaatcggcttcccatgagccttgcgccctcacta 581

                      
Query: 490 tcaacatagta 500
           |||||||||||
Sbjct: 580 tcaacatagta 570
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>dbj|AK071652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099E18, full
           insert sequence
          Length = 1217

 Score =  204 bits (103), Expect = 2e-49
 Identities = 259/311 (83%)
 Strand = Plus / Minus

                                                                       
Query: 190 ggggcctcggccatctcttgctcgacgggagccgcctggaccgggtagtagtggtagtgc 249
           ||||| |||||||| || |||||||| ||||  ||||  ||||||||||| | |||||||
Sbjct: 885 ggggcatcggccatttcctgctcgacaggagtggcctcaaccgggtagtacttgtagtgc 826

                                                                       
Query: 250 agctctccgacatcatctccggacagcttcttccatccgtcagggccaacgtagtacaca 309
           ||||| || ||||||||||| || |||||| |||| ||||  |||||||| | ||| || 
Sbjct: 825 agctccccaacatcatctccagaaagcttcgtccagccgttcgggccaacatggtaaacg 766

                                                                       
Query: 310 ctaacgcagccgccactggctccgtcacggaacgttgcatgataaatagccctccgtgct 369
           ||||| || || ||||| || || |||||||| || || || |||||||||| || ||||
Sbjct: 765 ctaacacaaccaccacttgccccatcacggaatgtagcttggtaaatagcccgccttgct 706

                                                                       
Query: 370 aactcagcagcttcctcaactgacatgttgaatttgtaaccctcatccaagataccataa 429
           |||||||||||||||||||||| |||     |   ||||||||| |||||||||||||| 
Sbjct: 705 aactcagcagcttcctcaactggcatcacatagcggtaaccctcgtccaagataccatag 646

                                                                       
Query: 430 gcatatagagagccagaaccaacagagaaccggcttcccttgagccttgcaccctcacta 489
           ||||| ||||| || || ||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 645 gcatacagagaacctgatccaacagagaatcggcttcccatgagccttgcgccctcacta 586

                      
Query: 490 tcaacatagta 500
           |||||||||||
Sbjct: 585 tcaacatagta 575
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>dbj|AB026567.1| Oryza sativa (japonica cultivar-group) OsPBE1 mRNA for beta 5
           subunit of 20S proteasome, complete cds
          Length = 1233

 Score =  204 bits (103), Expect = 2e-49
 Identities = 259/311 (83%)
 Strand = Plus / Minus

                                                                       
Query: 190 ggggcctcggccatctcttgctcgacgggagccgcctggaccgggtagtagtggtagtgc 249
           ||||| |||||||| || |||||||| ||||  ||||  ||||||||||| | |||||||
Sbjct: 879 ggggcatcggccatttcctgctcgacaggagtggcctcaaccgggtagtacttgtagtgc 820

                                                                       
Query: 250 agctctccgacatcatctccggacagcttcttccatccgtcagggccaacgtagtacaca 309
           ||||| || ||||||||||| || |||||| |||| ||||  |||||||| | ||| || 
Sbjct: 819 agctccccaacatcatctccagaaagcttcgtccagccgttcgggccaacatggtaaacg 760

                                                                       
Query: 310 ctaacgcagccgccactggctccgtcacggaacgttgcatgataaatagccctccgtgct 369
           ||||| || || ||||| || || |||||||| || || || |||||||||| || ||||
Sbjct: 759 ctaacacaaccaccacttgccccatcacggaatgtagcttggtaaatagcccgccttgct 700

                                                                       
Query: 370 aactcagcagcttcctcaactgacatgttgaatttgtaaccctcatccaagataccataa 429
           |||||||||||||||||||||| |||     |   ||||||||| |||||||||||||| 
Sbjct: 699 aactcagcagcttcctcaactggcatcacatagcggtaaccctcgtccaagataccatag 640

                                                                       
Query: 430 gcatatagagagccagaaccaacagagaaccggcttcccttgagccttgcaccctcacta 489
           ||||| ||||| || || ||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 639 gcatacagagaacctgatccaacagagaatcggcttcccatgagccttgcgccctcacta 580

                      
Query: 490 tcaacatagta 500
           |||||||||||
Sbjct: 579 tcaacatagta 569
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                           
Query: 409     ccctcatccaagataccataagcatatagagagccagaaccaacagagaaccggcttccc 468
               ||||| |||||||||||||| ||||| ||||| || || ||||||||||| |||||||||
Sbjct: 2771152 ccctcgtccaagataccataggcatacagagaacctgatccaacagagaatcggcttccc 2771211

                                               
Query: 469     ttgagccttgcaccctcactatcaacatagta 500
                |||||||||| ||||||||||||||||||||
Sbjct: 2771212 atgagccttgcgccctcactatcaacatagta 2771243



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                           
Query: 190     ggggcctcggccatctcttgctcgacgggagccgcctggaccgggtagtagtggtagtgc 249
               ||||| |||||||| || |||||||| ||||  ||||  ||||||||||| | |||||||
Sbjct: 2770397 ggggcatcggccatttcctgctcgacaggagtggcctcaaccgggtagtacttgtagtgc 2770456

                                                                 
Query: 250     agctctccgacatcatctccggacagcttcttccatccgtcagggccaac 299
               ||||| || ||||||||||| || |||||| |||| ||||  ||||||||
Sbjct: 2770457 agctccccaacatcatctccagaaagcttcgtccagccgttcgggccaac 2770506



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                         
Query: 334     tcacggaacgttgcatgataaatagccctccgtgctaactcagcagcttcctcaactg 391
               |||||||| || || || |||||||||| || ||||||||||||||||||||||||||
Sbjct: 2770989 tcacggaatgtagcttggtaaatagcccgccttgctaactcagcagcttcctcaactg 2771046
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>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085L11
          Length = 148142

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                         
Query: 409   ccctcatccaagataccataagcatatagagagccagaaccaacagagaaccggcttccc 468
             ||||| |||||||||||||| ||||| ||||| || || ||||||||||| |||||||||
Sbjct: 14633 ccctcgtccaagataccataggcatacagagaacctgatccaacagagaatcggcttccc 14692

                                             
Query: 469   ttgagccttgcaccctcactatcaacatagta 500
              |||||||||| ||||||||||||||||||||
Sbjct: 14693 atgagccttgcgccctcactatcaacatagta 14724



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                         
Query: 190   ggggcctcggccatctcttgctcgacgggagccgcctggaccgggtagtagtggtagtgc 249
             ||||| |||||||| || |||||||| ||||  ||||  ||||||||||| | |||||||
Sbjct: 13878 ggggcatcggccatttcctgctcgacaggagtggcctcaaccgggtagtacttgtagtgc 13937

                                                               
Query: 250   agctctccgacatcatctccggacagcttcttccatccgtcagggccaac 299
             ||||| || ||||||||||| || |||||| |||| ||||  ||||||||
Sbjct: 13938 agctccccaacatcatctccagaaagcttcgtccagccgttcgggccaac 13987



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 334   tcacggaacgttgcatgataaatagccctccgtgctaactcagcagcttcctcaactg 391
             |||||||| || || || |||||||||| || ||||||||||||||||||||||||||
Sbjct: 14470 tcacggaatgtagcttggtaaatagcccgccttgctaactcagcagcttcctcaactg 14527
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>ref|NM_101176.2| Arabidopsis thaliana PBE1; endopeptidase/ peptidase/ threonine
           endopeptidase AT1G13060 (PBE1) mRNA, complete cds
          Length = 1147

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 884 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 825

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 824 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 765

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  |||| ||||||||| | |||||| |||||||||||
Sbjct: 764 tagattgatctccttgctaactcggaagcttcttcaactgacat 721
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>gb|AY150473.1| Arabidopsis thaliana proteasome epsilon chain precursor (At1g13060)
           mRNA, complete cds
          Length = 856

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 773 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 714

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 713 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 654

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  |||| ||||||||| | |||||| |||||||||||
Sbjct: 653 tagattgatctccttgctaactcggaagcttcttcaactgacat 610
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>gb|AY050871.1| Arabidopsis thaliana putative proteasome epsilon chain precursor
           (At1g13060) mRNA, complete cds
          Length = 1091

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 866 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 807

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 806 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 747

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  |||| ||||||||| | |||||| |||||||||||
Sbjct: 746 tagattgatctccttgctaactcggaagcttcttcaactgacat 703
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>gb|AF348579.1| Arabidopsis thaliana clone C00191 (e) putative proteasome epsilon
           chain precursor (At1g13060) mRNA, complete cds
          Length = 825

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 773 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 714

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 713 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 654

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  |||| ||||||||| | |||||| |||||||||||
Sbjct: 653 tagattgatctccttgctaactcggaagcttcttcaactgacat 610
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>emb|BX815505.1|CNS0ABBC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS68ZF03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1031

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 866 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 807

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 806 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 747

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  |||| ||||||||| | |||||| |||||||||||
Sbjct: 746 tagattgatctccttgctaactcggaagcttcttcaactgacat 703
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>emb|BX841869.1|CNS09Y42 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH46ZD01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1023

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 811 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 752

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 751 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 692

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  |||| ||||||||| | |||||| |||||||||||
Sbjct: 691 tagattgatctccttgctaactcggaagcttcttcaactgacat 648
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>emb|AJ011383.1|CAR011383 Cicer arietinum mRNA for 20S proteasome beta subunit
          Length = 1043

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 180/227 (79%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||| ||| |||||||| || || || |||||||| || ||||  |||||||||||    
Sbjct: 743 gggttgtaatggtagtgaagttccccaacatcatcaccagacaatttcttccatccagtt 684

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || |||||||||||||| ||| |    || ||||| ||||| ||||| || |||||||||
Sbjct: 683 ggtccaacgtagtacacgctagcaactccaccactagctccatcacgaaatgttgcatga 624

                                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacatgttgaatttgtaaccc 411
           ||||| || | ||| || |  |||| ||||||||||| ||||||||   ||||||| || 
Sbjct: 623 taaattgctcgccgagccagttcagaagcttcctcaattgacatgtcatatttgtacccg 564

                                                          
Query: 412 tcatccaagataccataagcatatagagagccagaaccaacagagaa 458
              ||||||| ||||||||||||| |||| ||||| |||||||||||
Sbjct: 563 ctgtccaagacaccataagcatatggagaaccagatccaacagagaa 517
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>gb|AF323592.1|AF323592 Prunus persica putative 20S proteasome beta subunit 5 mRNA, partial
           cds
          Length = 817

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                       
Query: 322 ccactggctccgtcacggaacgttgcatgataaatagccctccgtgctaactcagcagct 381
           ||||||||||| |||||||| ||||||||||| |||||||| |  || ||||||||||||
Sbjct: 466 ccactggctccatcacggaatgttgcatgatatatagcccttctagccaactcagcagct 407

                         
Query: 382 tcctcaactgacat 395
           || ||||| |||||
Sbjct: 406 tcttcaacagacat 393
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>emb|Y13695.1|ATY13695 Arabidopsis thaliana mRNA for proteasome subunit prce
          Length = 1031

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 132/164 (80%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 799 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 740

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 739 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 680

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  ||||  |||||||| | |||||| |||||||||||
Sbjct: 679 tagattgatctcctcgctaactcggaagcttcttcaactgacat 636
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>gb|AF043536.1|AF043536 Arabidopsis thaliana 20S proteasome beta subunit PBE1 (PBE1) mRNA,
           complete cds
          Length = 1031

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 132/164 (80%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 799 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 740

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 739 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 680

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  ||||  |||||||| | |||||| |||||||||||
Sbjct: 679 tagattgatctcctcgctaactcggaagcttcttcaactgacat 636
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>emb|BX814144.1|CNS0AC2D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB59ZB11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 958

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/164 (79%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||  ||||| || ||||||||||| || || ||| ||||| | || 
Sbjct: 785 gggtagtaatggtagtttagctccccaacatcatctcctgatagtttcgtccattcttcg 726

                                                                       
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatga 351
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || ||||| 
Sbjct: 725 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatgg 666

                                                       
Query: 352 taaatagccctccgtgctaactcagcagcttcctcaactgacat 395
           || || |  |||| ||||||||| | |||||| |||||||||||
Sbjct: 665 tagattgatctccttgctaactcggaagcttcttcaactgacat 622
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>gb|AY089104.1| Arabidopsis thaliana clone 33591 mRNA, complete sequence
          Length = 1090

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
           |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 883 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 824

                                                                      
Query: 292 gggccaacgtagtacacactaacgcagccgccactggctccgtcacggaacgttgcatg 350
           || ||||||| |||||| ||| |    || ||||||||||| |||||||| || |||||
Sbjct: 823 ggaccaacgtggtacacgctagcaactccaccactggctccatcacggaatgtcgcatg 765
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>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
          Length = 99758

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 232   gggtagtagtggtagtgcagctctccgacatcatctccggacagcttcttccatccgtca 291
             |||||||| |||||||| ||||| || ||||||||||| || || ||| ||||||| || 
Sbjct: 27301 gggtagtaatggtagtgtagctccccaacatcatctcctgatagtttcgtccatccttcg 27242

                              
Query: 292   gggccaacgtagtacac 308
             || ||||||| ||||||
Sbjct: 27241 ggaccaacgtggtacac 27225



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 322   ccactggctccgtcacggaacgttgcatgataaatagccctccgtgctaactcagcagct 381
             ||||||||||| |||||||| || ||||| || || |  |||| ||||||||| | ||||
Sbjct: 27116 ccactggctccatcacggaatgtcgcatggtagattgatctccttgctaactcggaagct 27057

                           
Query: 382   tcctcaactgacat 395
             || |||||||||||
Sbjct: 27056 tcttcaactgacat 27043
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>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence
          Length = 135659

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                         
Query: 322   ccactggctccgtcacggaacgttgcatgataaatagccctccgtgctaactcagcagct 381
             ||||||||||| ||||| || |||||||||||||| ||||  || || |  || | ||||
Sbjct: 70087 ccactggctccatcacgaaatgttgcatgataaattgcccgtcgagccagttccgaagct 70028

                             
Query: 382   tcctcaactgacatgt 397
             ||||||||||||||||
Sbjct: 70027 tcctcaactgacatgt 70012
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>emb|AJ291741.1|NTA291741 Nicotiana tabacum partial mRNA for putative beta5 proteasome
           subunit (b5 gene)
          Length = 524

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 322 ccactggctccgtcacggaacgttgcatgataaatagc 359
           ||||| ||||| |||||||| |||||||||||||||||
Sbjct: 455 ccactagctccatcacggaatgttgcatgataaatagc 418



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                       
Query: 414 atccaagataccataagcatatagagagccagaaccaacagagaaccggcttcccttgag 473
           |||||| | ||||||||||||  | || ||||| ||||||||||| | | |||| |||||
Sbjct: 363 atccaaaacaccataagcataaggtgaaccagatccaacagagaatctgtttcctttgag 304

                                   
Query: 474 ccttgcaccctcactatcaacata 497
            ||| | |||||||| || |||||
Sbjct: 303 tcttcctccctcactgtccacata 280
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>gb|DQ450069.1| Arachis hypogaea clone 6A4R2G 20S proteasome beta subunit mRNA,
           partial cds
          Length = 802

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 415 tccaagataccataagcatatagagagccagaaccaacagagaa 458
           ||||| ||||||||||||||| | || ||||| |||||||||||
Sbjct: 439 tccaatataccataagcatatggtgaaccagatccaacagagaa 396



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 322 ccactggctccgtcacggaacgttgcatgata 353
           ||||| ||||| |||||||| |||||||||||
Sbjct: 532 ccactagctccatcacggaatgttgcatgata 501
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>ref|XM_787263.1| PREDICTED: Strongylocentrotus purpuratus similar to Proteasome
           subunit beta type 5 precursor (Proteasome epsilon chain)
           (Macropain epsilon chain) (Multicatalytic endopeptidase
           complex epsilon chain) (Proteasome subunit X)
           (Proteasome chain 6) (LOC587539), mRNA
          Length = 564

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 403 ttgtaaccctcatccaagataccataagcatatagagagccagaaccaacagagaa 458
           |||||||||||||||| || |||||| |||||| | || || ||||| ||||||||
Sbjct: 380 ttgtaaccctcatccaggacaccataggcatatggtgatcctgaacctacagagaa 325
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>ref|NM_001037612.1| Bos taurus proteasome (prosome, macropain) subunit, beta type, 5
           (PSMB5), mRNA
          Length = 1385

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 427 taagcatatagagagccagaaccaacagagaa 458
           |||||||||| |||||||||||| ||||||||
Sbjct: 938 taagcatatacagagccagaacctacagagaa 907
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>gb|BC110039.1| Bos taurus cDNA clone MGC:134464 IMAGE:8048388, complete cds
          Length = 1385

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 427 taagcatatagagagccagaaccaacagagaa 458
           |||||||||| |||||||||||| ||||||||
Sbjct: 938 taagcatatacagagccagaacctacagagaa 907
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>ref|XM_537370.2| PREDICTED: Canis familiaris similar to proteasome beta 5 subunit
           (LOC480246), mRNA
          Length = 1081

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 424 ccataagcatatagagagccagaaccaacagagaa 458
           ||||||||||| | |||||||||||| ||||||||
Sbjct: 662 ccataagcatacacagagccagaacctacagagaa 628
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>dbj|D78172.1| Spinacia oleracea mRNA for 26S proteasome beta subunit, complete
           cds
          Length = 1096

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 423 accataagcatatagagagccagaaccaacagagaaccggcttcccttgagcctt 477
           ||||||||||||| | || ||||| ||||| ||||||||  |||| |||||||||
Sbjct: 621 accataagcatatggtgaaccagatccaactgagaaccgcattcctttgagcctt 567
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>ref|XM_959619.1| Neurospora crassa OR74A hypothetical protein (NCU00551.1) partial
            mRNA
          Length = 7194

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 252  ctctccgacatcatctccggacagct 277
            ||||||||||||||||||| ||||||
Sbjct: 5801 ctctccgacatcatctccgcacagct 5776
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>ref|XM_324730.1| Neurospora crassa OR74A hypothetical protein (NCU00551.1) partial
            mRNA
          Length = 7194

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 252  ctctccgacatcatctccggacagct 277
            ||||||||||||||||||| ||||||
Sbjct: 5801 ctctccgacatcatctccgcacagct 5776
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>gb|AC010655.7| Homo sapiens chromosome 7 clone RP11-155G14, complete sequence
          Length = 165090

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 7      aaatgaaacttcaatggaaacatct 31
              ||||||| |||||||||||||||||
Sbjct: 147301 aaatgaagcttcaatggaaacatct 147277
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>gb|AY169345.1| Aeromonas schubertii strain CECT 4254 RNA polymerase sigma-70
           factor (rpoD) gene, partial cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 141 ctctccgacatcatctccgg 160
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>gb|AY169344.1| Aeromonas enteropelogenes strain CECT 4255 RNA polymerase sigma-70
           factor (rpoD) gene, partial cds
          Length = 816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 141 ctctccgacatcatctccgg 160
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>gb|AY169341.1| Aeromonas jandaei strain CECT 4228 RNA polymerase sigma-70 factor
           (rpoD) gene, partial cds
          Length = 819

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 141 ctctccgacatcatctccgg 160
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>gb|AY169336.1| Aeromonas schubertii strain CECT 4240 RNA polymerase sigma-70
           factor (rpoD) gene, partial cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 141 ctctccgacatcatctccgg 160
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>gb|AY249198.1| Aeromonas enteropelogenes CECT 4935 RNA polymerase sigma-70 factor
           (rpoD) gene, partial cds
          Length = 816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 141 ctctccgacatcatctccgg 160
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>gb|AY249196.1| Aeromonas jandaei 344 RNA polymerase sigma-70 factor (rpoD) gene,
           partial cds
          Length = 819

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 141 ctctccgacatcatctccgg 160
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>gb|AY646195.1| Canis familiaris tyrosine kinase receptor ron mRNA, partial cds
          Length = 3121

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  ggaggaggcaaacaagcccc 138
            ||||||||||||||||||||
Sbjct: 2898 ggaggaggcaaacaagcccc 2917
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>gb|AC147216.3| Pan troglodytes BAC clone RP43-156I12 from 7, complete sequence
          Length = 199965

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aacttcaatggaaacatcta 32
             ||||||||||||||||||||
Sbjct: 74696 aacttcaatggaaacatcta 74715
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>gb|AY518886.1| Brassica napus putative proteasome 20S beta5 subunit mRNA, partial
           cds
          Length = 449

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 328 gctccgtcacggaacgttgcatgataaatagccctccgtgctaactcagcagcttcctca 387
           ||||| |||||||| || |||||||| || |  |||| ||| ||||| | |||||| |||
Sbjct: 449 gctccatcacggaatgtcgcatgatagattgatctccttgccaactcggaagcttcttca 390

                   
Query: 388 actgacat 395
           ||||||||
Sbjct: 389 actgacat 382
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>gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, complete sequence
          Length = 220629

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 410    cctcatccaagataccataa 429
              ||||||||||||||||||||
Sbjct: 105331 cctcatccaagataccataa 105312
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>gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome 14, complete sequence
          Length = 203640

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 410   cctcatccaagataccataa 429
             ||||||||||||||||||||
Sbjct: 45543 cctcatccaagataccataa 45562
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>ref|XM_533823.2| PREDICTED: Canis familiaris tyrosine kinase receptor ron (LOC444854),
            mRNA
          Length = 4351

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  ggaggaggcaaacaagcccc 138
            ||||||||||||||||||||
Sbjct: 4134 ggaggaggcaaacaagcccc 4153
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>gb|AY314773.1| Caenorhabditis elegans flamingo-like protein FMI-1 mRNA, complete cds
          Length = 7972

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gaattcaaatgaaacttcaa 20
            ||||||||||||||||||||
Sbjct: 4835 gaattcaaatgaaacttcaa 4816
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>gb|AC153588.11| Mus musculus 6 BAC RP23-430H2 (Roswell Park Cancer Institute
           (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 188672

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  caatggaaacatctataaca 37
           ||||||||||||||||||||
Sbjct: 503 caatggaaacatctataaca 522
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>emb|AL512412.7| Human DNA sequence from clone RP11-49H10 on chromosome 1 Contains the
             3' end of the SMYD3 gene for SET and MYND domain
             containing 3 and a CpG island, complete sequence
          Length = 85198

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   gggagccgcctggaccgggt 235
             ||||||||||||||||||||
Sbjct: 82973 gggagccgcctggaccgggt 82992
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>gb|AY127866.1| Aeromonas trota RNA polymerase sigma factor D gene, partial cds
          Length = 841

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 169 ctctccgacatcatctccgg 188
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>gb|AY127864.1| Aeromonas schubertii RNA polymerase sigma factor D gene, partial
           cds
          Length = 850

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 169 ctctccgacatcatctccgg 188
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>gb|AY127861.1| Aeromonas jandaei RNA polymerase sigma factor D gene, partial cds
          Length = 844

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ctctccgacatcatctccgg 271
           ||||||||||||||||||||
Sbjct: 169 ctctccgacatcatctccgg 188
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>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   gtagtagtggtagtgcagct 253
             ||||||||||||||||||||
Sbjct: 76230 gtagtagtggtagtgcagct 76211
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>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete
             sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   cctcatccaagataccataa 429
             ||||||||||||||||||||
Sbjct: 97100 cctcatccaagataccataa 97081
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>dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:KB907F12, MX1-D21S171
              region, complete sequence
          Length = 130626

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 124    aggcaaacaagccccaaagtccaa 147
              |||||||| |||||||||||||||
Sbjct: 126175 aggcaaaccagccccaaagtccaa 126198
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      aacttcaatggaaacatcta 32
               ||||||||||||||||||||
Sbjct: 3602534 aacttcaatggaaacatcta 3602553
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>gb|AC160973.4| Mus musculus BAC clone RP24-171J16 from chromosome 6, complete sequence
          Length = 159284

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     caatggaaacatctataaca 37
              ||||||||||||||||||||
Sbjct: 107453 caatggaaacatctataaca 107472
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>ref|NM_073855.2| Caenorhabditis elegans F15B9.7 (cadherin) mRNA, complete cds
          Length = 7947

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gaattcaaatgaaacttcaa 20
            ||||||||||||||||||||
Sbjct: 4815 gaattcaaatgaaacttcaa 4796
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>dbj|BS000135.1| Pan troglodytes chromosome 22 clone:RP43-114M01, map 22, complete
             sequences
          Length = 73133

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   aggcaaacaagccccaaagtccaa 147
             |||||||| |||||||||||||||
Sbjct: 55245 aggcaaaccagccccaaagtccaa 55268
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>dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20, map 22, complete
            sequences
          Length = 179285

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 124  aggcaaacaagccccaaagtccaa 147
            |||||||| |||||||||||||||
Sbjct: 9348 aggcaaaccagccccaaagtccaa 9371
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>emb|Z78018.1|CEW07G4 Caenorhabditis elegans Cosmid W07G4, complete sequence
          Length = 31001

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gaattcaaatgaaacttcaa 20
            ||||||||||||||||||||
Sbjct: 9653 gaattcaaatgaaacttcaa 9634
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>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    tgaaacttcaatggaaacatctat 33
             ||||||||||||||||| ||||||
Sbjct: 35322 tgaaacttcaatggaaaaatctat 35345
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 124    aggcaaacaagccccaaagtccaa 147
              |||||||| |||||||||||||||
Sbjct: 102328 aggcaaaccagccccaaagtccaa 102351
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>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171
             region, complete sequence
          Length = 145762

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   aggcaaacaagccccaaagtccaa 147
             |||||||| |||||||||||||||
Sbjct: 33375 aggcaaaccagccccaaagtccaa 33398


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,608,835
Number of Sequences: 3902068
Number of extensions: 3608835
Number of successful extensions: 63442
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63293
Number of HSP's gapped (non-prelim): 133
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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