Clone Name | rbart37e02 |
---|---|
Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 55.8 bits (133), Expect = 6e-08 Identities = 24/36 (66%), Positives = 31/36 (86%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372 PFS+R+TS+SGKK++A +VIPANWRP+ Y S VQF Sbjct: 233 PFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNVQF 268
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 55.5 bits (132), Expect = 7e-08 Identities = 23/36 (63%), Positives = 31/36 (86%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372 PFS+R+TS+SGKK++A ++IPANWRP+ Y S VQF Sbjct: 155 PFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 190
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 49.3 bits (116), Expect = 5e-06 Identities = 21/36 (58%), Positives = 29/36 (80%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372 PFS+R+TS+ G LV ++VIPANW+P+T Y S +QF Sbjct: 209 PFSIRLTSEGGAHLVQDDVIPANWKPDTVYTSKLQF 244
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%) Frame = -2 Query: 479 PFSMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQF 372 PF++R+TS +S K +VA NVIPANW+P+ YRS V F Sbjct: 223 PFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%) Frame = -2 Query: 479 PFSMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQF 372 P S+R+TS +SGK +VA+NVIPANW+P Y+S V F Sbjct: 237 PLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = -2 Query: 479 PFSMRITSD-SGKKLVANNVIPANWRPNTDYRSFVQF 372 PF++R+TS SGKK++A VIP W P Y S V F Sbjct: 221 PFNIRLTSAVSGKKIIAKGVIPEKWSPGAIYHSKVNF 257
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 38.1 bits (87), Expect = 0.012 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = -2 Query: 479 PFSMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQFS 369 PFS+++T+ +GK L A +V+P NW P Y S + FS Sbjct: 224 PFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNFS 261
>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)| Length = 263 Score = 36.2 bits (82), Expect = 0.046 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRS 384 PF++R T++ G K A +VIP W+ +T Y S Sbjct: 231 PFTVRYTTEGGTKTEAEDVIPEGWKADTSYES 262
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 36.2 bits (82), Expect = 0.046 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = -2 Query: 479 PFSMRITSDSGKK-LVANNVIPANWRPNTDYRSFVQFS 369 PFS+++T+ S K L A +VIP+NW P Y S + FS Sbjct: 231 PFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNFS 268
>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l| 1.0101 and 1.0102) Length = 265 Score = 33.1 bits (74), Expect = 0.39 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRS 384 PF++R T++ G K A +VIP W+ +T Y + Sbjct: 233 PFTVRYTTEGGTKGEAEDVIPEGWKADTAYEA 264
>E78C_DROME (P45447) Ecdysone-induced protein 78C (DR-78)| Length = 866 Score = 32.3 bits (72), Expect = 0.66 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Frame = -1 Query: 471 HAHHQRLRQEAGGQQCHPGQLEAQHRLPL------LRPVQLIGPDRPMSGHVRLHHARMH 310 H H Q+ +Q+ QQ HPGQ + Q L L + + P S H + Sbjct: 189 HTHQQQQQQQQ--QQQHPGQQQHQLNCTLSNGGGALYTISSVHQFGPASNHNTSSSSPSS 246 Query: 309 ACMRSGPSAGCSSS 268 + S P +GCSS+ Sbjct: 247 SAAHSSPDSGCSSA 260
>NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor)| Length = 464 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 9/51 (17%) Frame = -3 Query: 127 WF---ACALP-PTDSVYGVPCITWH-----YLCVTKIPNQSYKLYYTYSLF 2 WF A ALP P S +P WH Y+C P+++ + YYT SLF Sbjct: 229 WFIALATALPIPIVSGLDIPMSPWHTKCEKYICREMWPSRTQEYYYTLSLF 279
>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)| Length = 263 Score = 32.0 bits (71), Expect = 0.87 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDY 390 PF++R T++ G K +VIP W+ +T Y Sbjct: 231 PFTVRYTTEGGTKSEFEDVIPEGWKADTSY 260
>SUR2_CAEEL (Q10669) Protein sur-2| Length = 1587 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 14/67 (20%) Frame = -1 Query: 468 AHHQRLRQEAGGQQCHPGQLEAQHRLPLLRPVQLIGPDRPMS---------GHVRL---- 328 + HQ ++Q++ HP Q + QH++P + Q +GP P + GHV + Sbjct: 1465 SQHQTIQQQSN----HPTQQQLQHQIPNMSMHQQMGPQYPGAVFHHPSGPVGHVPMQYGM 1520 Query: 327 -HHARMH 310 HH + H Sbjct: 1521 GHHMQQH 1527
>MPAL2_LOLPR (P14947) Pollen allergen Lol p 2-A (Lol p II-A)| Length = 97 Score = 30.0 bits (66), Expect = 3.3 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYR 387 PF+ R S+ G + V ++V+PA+++ T Y+ Sbjct: 65 PFNFRFVSEKGMRNVFDDVVPADFKVGTTYK 95
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 29.6 bits (65), Expect = 4.3 Identities = 9/22 (40%), Positives = 17/22 (77%) Frame = -2 Query: 473 SMRITSDSGKKLVANNVIPANW 408 S ++T+ G+ +V+NN+ PA+W Sbjct: 215 SFKVTASDGRTVVSNNIAPASW 236
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -2 Query: 473 SMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQF 372 S R+TS +G+ + A NV PANW Y+S F Sbjct: 227 SFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANF 261
>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)| Length = 269 Score = 29.6 bits (65), Expect = 4.3 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -2 Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNT 396 PF++R T++ G K +VIP W+ +T Sbjct: 237 PFTVRYTTEGGTKAEFEDVIPEGWKADT 264
>NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)| (Y5 receptor) (NPYY5) Length = 455 Score = 28.5 bits (62), Expect = 9.6 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = -3 Query: 115 ALPPTDSVYGVPCITWHYLCVTKIPNQSYKLYYTYSL 5 +L +G ++ YLCV P+ SY++ +T SL Sbjct: 189 SLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISL 225
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 28.5 bits (62), Expect = 9.6 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -2 Query: 473 SMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372 S ++ G A NV+P+NWR ++S V F Sbjct: 222 SFKVQLSDGSIKAALNVVPSNWRFGQSFKSNVNF 255
>FADL_SHIFL (P59741) Long-chain fatty acid transport protein precursor (Outer| membrane fadL protein) (Outer membrane flp protein) Length = 448 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -2 Query: 461 TSDSGKKLVANNVIPANWRPNTDY 390 TS SG+ L A+N+ P W PN + Sbjct: 88 TSPSGRSLKADNIAPTAWVPNMHF 111
>FADL_ECOLI (P10384) Long-chain fatty acid transport protein precursor (Outer| membrane fadL protein) (Outer membrane flp protein) Length = 448 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -2 Query: 461 TSDSGKKLVANNVIPANWRPNTDY 390 TS SG+ L A+N+ P W PN + Sbjct: 88 TSPSGRSLKADNIAPTAWVPNMHF 111
>FADL_ECO57 (Q8XCN6) Long-chain fatty acid transport protein precursor (Outer| membrane fadL protein) (Outer membrane flp protein) Length = 448 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -2 Query: 461 TSDSGKKLVANNVIPANWRPNTDY 390 TS SG+ L A+N+ P W PN + Sbjct: 88 TSPSGRSLKADNIAPTAWVPNMHF 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,425,407 Number of Sequences: 219361 Number of extensions: 1354015 Number of successful extensions: 3962 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3672 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3961 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)