>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein|
           134) (Mel18 and Bmi1-like RING finger)
          Length = 352

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +1

Query: 322 SPAASNPRSGCPEEGEQPLSRAVATGCVGFVQEEVLGHAERAVG 453
           SP A  P     EEG  PLS   A GC G    E+    ER++G
Sbjct: 32  SPPALTPAPAAGEEGPAPLSETGAPGCSGSRPPEL--EPERSLG 73

>GFRA4_RAT (Q9EPI2) GDNF family receptor alpha-4 precursor (GFR-alpha-4)|
           (Persephin receptor)
          Length = 273

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/36 (50%), Positives = 19/36 (52%)
 Frame = +1

Query: 307 AYQISSPAASNPRSGCPEEGEQPLSRAVATGCVGFV 414
           A+Q S   A   R GCPEEG     RA A G VG V
Sbjct: 150 AFQASCAPAPGSRDGCPEEGGPRCLRAYA-GLVGTV 184

>SPR1_MOUSE (Q8BFQ3) Sphingosylphosphorylcholine receptor (G-protein coupled|
           receptor 68)
          Length = 365

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +1

Query: 286 RTSRAQEAYQISSPAASNPRSGCPEEGEQP 375
           RTSRA+EAY + +P AS  +SG   +GE+P
Sbjct: 312 RTSRAREAYPLGAPEASG-KSGA--QGEEP 338

>VE4_HPV08 (P06425) Probable protein E4|
          Length = 229

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +1

Query: 316 ISSPAASNPRSGCPEEGEQPLSRAVATGCVGFVQEEVLGHAERAVGGD 459
           +  P       G P +G+QP      T   G   EE  G  E AVGGD
Sbjct: 126 LQPPLGEGQVEGHPGDGDQPQGHPPPTPSNGHKGEEGDGEEEGAVGGD 173

>LAD1_MOUSE (P57016) Ladinin 1 (Lad-1) (Linear IgA disease autoantigen)|
          Length = 528

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 24/90 (26%), Positives = 34/90 (37%)
 Frame = +2

Query: 161 KSRRINQGQQ*TNRSVTTER*TGEDTGHSYSNIRSRATPV*DELLAPRKPTRSRRLPPQT 340
           K   +++  Q T  S  T R   E  G +   +  ++ P   E   P  PT++ R PP T
Sbjct: 298 KKAAVSEQPQTTGGSQATTR---EPRGRA---LPDKSPPSSAEQSTPAPPTKASRFPPIT 351

Query: 341 LDPGAPRKEXXXXXXXXXXXXXXXXRKRSS 430
           L    P K+                 KRSS
Sbjct: 352 LQVKIPSKDEDADTPSPTLLTYSSSLKRSS 381

>TBCD2_HUMAN (Q9BYX2) TBC1 domain family member 2 (Prostate antigen recognized|
           and indentified by SEREX) (PARIS-1)
          Length = 917

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +1

Query: 244 QLQQHQIQGNSSLRRTSRAQEAYQISSPAASNPRSGCPEEGEQPLSRAVAT 396
           Q   H I+GN   + T           P   +P+SG P+  EQPL+   +T
Sbjct: 216 QNTMHNIRGNKQAQGTGH-------EPPGEDSPQSGEPQREEQPLASDAST 259

>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic|
           kidney disease protein 1)
          Length = 4303

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 371 CSPSSGHPDLGFEAAGDEIW*ASWAREVRLKLELPWI*CCCSCALYLL 228
           CSP+ GHP  G +A       +SW   +  +LE  W   C +CAL LL
Sbjct: 729 CSPAPGHP--GPQAPYLSANASSWLPHLPAQLEGTW--ACPACALRLL 772

>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
            2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/64 (28%), Positives = 25/64 (39%)
 Frame = -1

Query: 301  GREKFVLNWSCPGSDVAVAVPXXXXXXXXXXXXXIGLLLTLVDAPTFAHICAIFSHEFHA 122
            G E+ VL  +CPG D+  AV                L   L D P  A + A     F +
Sbjct: 1154 GAERLVLAGACPGDDLLAAVEEAGASAVVCAQDAAALREALGDEPVTALVHAGTLTNFGS 1213

Query: 121  VMQV 110
            + +V
Sbjct: 1214 ISEV 1217

>UBP37_HUMAN (Q86T82) Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 37)
           (Ubiquitin-specific-processing protease 37)
           (Deubiquitinating enzyme 37)
          Length = 979

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
 Frame = +1

Query: 76  HLYGSTQVFTTTLASQRGTHERKLRIYGQKSAHQPGSTINQ*ICNYRTMNWRRYRAQL-- 249
           H  G T +  T ++SQ  + +R L    Q        ++ +  CN     W + R  L  
Sbjct: 279 HSSGGTNLDRTNVSSQTPSAKRSLGFLPQPVP----LSVKKLRCNQDYTGWNKPRVPLSS 334

Query: 250 -QQHQIQGNSSLRRT----SRAQEAYQISSPAASNPRSGCP 357
            QQ Q+QG S+L  T    +  Q  + + S A    + G P
Sbjct: 335 HQQQQLQGFSNLGNTCYMNAILQSLFSLQSFANDLLKQGIP 375

>GSHB_PROMP (Q7TUG9) Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase)|
           (GSH synthetase) (GSH-S) (GSHase)
          Length = 307

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 335 EAAGDEIW*ASWAREVRLKLELPWI 261
           EA GDE+W +SW  EV      PW+
Sbjct: 43  EARGDEVWASSWRAEV-----CPWV 62

>GOGA1_MOUSE (Q9CW79) Golgin subfamily A member 1 (Golgin-97)|
          Length = 758

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +1

Query: 241 AQLQQHQIQGNSSLRRTSRAQEAYQISSPAASNPRSGCPEEGEQPL--SRAVATGCVGFV 414
           A LQ H++Q      +T +AQEA       A+      P +G++PL  S+A+        
Sbjct: 538 ALLQMHKLQRELEALKTCKAQEAM-----PATTGEDCLPLQGQEPLVISKAMQN------ 586

Query: 415 QEEVLGHAERAVGGDDGAAD 474
            E  L  AE    G+ GA+D
Sbjct: 587 SEYELPAAEGTPNGEVGASD 606


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,883,418
Number of Sequences: 219361
Number of extensions: 1337407
Number of successful extensions: 3826
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3825
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)