ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart37c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||||||||| ||||||||||| || || ||||| ||||| ||| || || | | Sbjct: 530 cccatggcgtacttctgcgtccagcctcttgcggtggattcgtatctgaggcgatcagtc 471 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 470 ttgcacatatgagcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagc 411 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 ||||| |||||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 410 gagcagatcgacagaagaaccttggagatggtgagagctgggctccactg 361
>dbj|AK120237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043N18, full insert sequence Length = 815 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||||||||| ||||||||||| || || ||||| ||||| ||| || || | | Sbjct: 530 cccatggcgtacttctgcgtccagcctcttgcggtggattcgtatctgaggcgatcagtc 471 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 470 ttgcacatatgagcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagc 411 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 ||||| |||||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 410 gagcagatcgacagaagaaccttggagatggtgagagctgggctccactg 361
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||||||||| ||||||||||| || || ||||| ||||| ||| || || | | Sbjct: 1079367 cccatggcgtacttctgcgtccagcctcttgcggtggattcgtatctgaggcgatcagtc 1079308 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1079307 ttgcacatatgagcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagc 1079248 Query: 412 gagcatatcgacagcagaacct 433 ||||| |||||||| ||||||| Sbjct: 1079247 gagcagatcgacagaagaacct 1079226 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctccactg 461 |||||||| |||||||| || ||||||||||| Sbjct: 1079122 accttggagatggtgagagctgggctccactg 1079091
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||||||||| ||||||||||| || || ||||| ||||| ||| || || | | Sbjct: 31891 cccatggcgtacttctgcgtccagcctcttgcggtggattcgtatctgaggcgatcagtc 31832 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31831 ttgcacatatgagcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagc 31772 Query: 412 gagcatatcgacagcagaacct 433 ||||| |||||||| ||||||| Sbjct: 31771 gagcagatcgacagaagaacct 31750 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctccactg 461 |||||||| |||||||| || ||||||||||| Sbjct: 31646 accttggagatggtgagagctgggctccactg 31615
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||||||||| ||||||||||| || || ||||| ||||| ||| || || | | Sbjct: 68075 cccatggcgtacttctgcgtccagcctcttgcggtggattcgtatctgaggcgatcagtc 68016 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 68015 ttgcacatatgagcgatctccggcaccagcggatcgtccgggttcgggtccgtcagcagc 67956 Query: 412 gagcatatcgacagcagaacct 433 ||||| |||||||| ||||||| Sbjct: 67955 gagcagatcgacagaagaacct 67934 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctccactg 461 |||||||| |||||||| || ||||||||||| Sbjct: 67830 accttggagatggtgagagctgggctccactg 67799
>gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 Score = 109 bits (55), Expect = 8e-21 Identities = 145/175 (82%) Strand = Plus / Minus Query: 287 tctaccccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggt 346 |||| |||||||||||||| || |||||| | ||||||||||||||| ||| ||| | Sbjct: 458 tctagcccatggcgtacttctgtgtccaggagcgcgccgtggactcgtacttggcccgat 399 Query: 347 cggccttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtca 406 | | |||| ||||||| |||||||| |||||||| || || || |||||||||||||||| Sbjct: 398 cagtcttgtacatgtgagcgatctcgggcaccagaggatcatcggggttcgggtccgtca 339 Query: 407 gcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 ||| ||| || || |||||||| ||||| |||||||| | || ||||||||||| Sbjct: 338 gcaacgaacagattgacagcaggacctttgatatggtcaaagccgggctccactg 284
>gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 99.6 bits (50), Expect = 8e-18 Identities = 140/170 (82%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 ||||| |||||||| |||||||||| | |||||| ||||||||| | | |||||| | | Sbjct: 580 cccatcgcgtacttctgcgtccagctgcgggccgtcgactcgtacttcggccggtccgtc 521 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || |||||||| || || |||||||||||||| ||||| |||||||| Sbjct: 520 ttgtacatgtgggcaatctccgggacaagagggtcgtccgggttggggtcggtcagcagg 461 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 ||||| || || ||||| ||||| || || || || || ||||||||||| Sbjct: 460 gagcagatggagagcaggaccttagaaattgtcagagcagggctccactg 411
>gb|AY109411.1| Zea mays CL25406_3 mRNA sequence Length = 1037 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 330 ctcgtacctggtccggtcggccttgcacatgtgcgcgatctccggcaccagcgggtcgtc 389 ||||||| || ||||||| | |||| |||||||||| ||||| || ||||| || ||||| Sbjct: 128 ctcgtacttgttccggtccgtcttgtacatgtgcgctatctcggggaccagaggatcgtc 187 Query: 390 cgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtgagggc 449 |||||||| || |||||||| ||||| || |||||||| |||||||| ||||| || || Sbjct: 188 ggggttcggatcggtcagcagggagcagatggacagcagcaccttggagatggttagcgc 247 Query: 450 ggggctccactg 461 ||||||||||| Sbjct: 248 cgggctccactg 259
>gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 ||||| |||||||| |||||||||| | |||||| ||||||||| | | |||||| | | Sbjct: 543 cccatcgcgtacttctgcgtccagctgcgggccgtcgactcgtacttcggccggtccgtc 484 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || |||||||| || || |||||||||||||| ||||| |||||||| Sbjct: 483 ttgtacatgtgggcaatctccgggacaagagggtcgtccgggttggggtcggtcagcagg 424 Query: 412 gagcatatcgacagcagaacctt 434 ||||| || || ||||| ||||| Sbjct: 423 gagcagatggagagcaggacctt 401
>gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 ||||| |||||||| |||||||||| | |||||| ||||||||| | | |||||| | | Sbjct: 483 cccatcgcgtacttctgcgtccagctgcgggccgtcgactcgtacttcggccggtccgtc 424 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || |||||||| || || |||||||||||||| ||||| |||||||| Sbjct: 423 ttgtacatgtgggcaatctccgggacaagagggtcgtccgggttggggtcggtcagcagg 364 Query: 412 gagcatatcgacagcagaacctt 434 ||||| || || ||||| ||||| Sbjct: 363 gagcagatggagagcaggacctt 341
>ref|XM_954840.1| Neurospora crassa OR74A hypothetical protein ( (XM_016084) hypothetical protein XP_016084 [Homo sapiens] ) (NCU02289.1) partial mRNA Length = 444 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 330 ctcgtacctggtccggtcggccttgcacatgtgcgcgatctccggcaccagcgggtcgtc 389 ||||||||||| ||||| | |||| ||| |||||| ||||| ||||| ||||||||||| Sbjct: 405 ctcgtacctggcgcggtctgtcttgtacacgtgcgcaatctcgggcacaagcgggtcgtc 346 Query: 390 cgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttgga 437 ||||| || ||||||| || |||||| || || |||||||||||||| Sbjct: 345 agggttgggatccgtcaacatcgagcagatggagagcagaaccttgga 298
>ref|XM_331064.1| Neurospora crassa OR74A hypothetical protein ( (XM_016084) hypothetical protein XP_016084 [Homo sapiens] ) (NCU02289.1) partial mRNA Length = 444 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 330 ctcgtacctggtccggtcggccttgcacatgtgcgcgatctccggcaccagcgggtcgtc 389 ||||||||||| ||||| | |||| ||| |||||| ||||| ||||| ||||||||||| Sbjct: 405 ctcgtacctggcgcggtctgtcttgtacacgtgcgcaatctcgggcacaagcgggtcgtc 346 Query: 390 cgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttgga 437 ||||| || ||||||| || |||||| || || |||||||||||||| Sbjct: 345 agggttgggatccgtcaacatcgagcagatggagagcagaaccttgga 298
>ref|XM_474269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 384 cttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagcag 325 Query: 411 cgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || || ||||| || ||||| |||||||| || || || |||||||| Sbjct: 324 tgaacaaattgacaggaggacctttgatatggtaagtgcaggactccactg 274
>gb|AY086109.1| Arabidopsis thaliana clone 21455 mRNA, complete sequence Length = 709 Score = 77.8 bits (39), Expect = 3e-11 Identities = 135/167 (80%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 ||||| |||||||| || ||||||| || || || ||||||||| ||| || || | | Sbjct: 546 cccattgcgtacttttgtgtccagcttctcgcagttgactcgtacttggacctatctgtc 487 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| |||| Sbjct: 486 ttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacagc 427 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 ||||| ||||||| |||||||||||| || || || || |||||||| Sbjct: 426 gagcaaatcgacaacagaaccttggagatagtaagagcagggctcca 380
>dbj|AK119682.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A01, full insert sequence Length = 832 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 539 cttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagcag 480 Query: 411 cgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || || ||||| || ||||| |||||||| || || || |||||||| Sbjct: 479 tgaacaaattgacaggaggacctttgatatggtaagtgcaggactccactg 429
>ref|NM_124997.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.2 mRNA, complete cds Length = 744 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || |||||||||| |||||||||||||| ||||||||||||| ||| Sbjct: 428 tcgtcagggtttggatccgtcagcaatgagcatatcgacagaagaaccttggatacggta 369 Query: 445 agggcggggctccactg 461 || || ||||||||||| Sbjct: 368 agtgcagggctccactg 352
>ref|NM_180867.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.1 mRNA, complete cds Length = 751 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || |||||||||| |||||||||||||| ||||||||||||| ||| Sbjct: 435 tcgtcagggtttggatccgtcagcaatgagcatatcgacagaagaaccttggatacggta 376 Query: 445 agggcggggctccactg 461 || || ||||||||||| Sbjct: 375 agtgcagggctccactg 359
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 362 gcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcg 421 ||||||| |||||||||||||||||||| ||||| |||||||||| ||| ||||| | | Sbjct: 573323 gcgcgatatccggcaccagcgggtcgtcagggttggggtccgtcaacagagagcacacgg 573264 Query: 422 acagcagaacctt 434 |||||| |||||| Sbjct: 573263 acagcaaaacctt 573251
>ref|XM_838144.1| Leishmania major strain Friedlin ubiquitin-conjugating enzyme E2 (LMJ_1061) partial mRNA Length = 447 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 362 gcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcg 421 ||||||| |||||||||||||||||||| ||||| |||||||||| ||| ||||| | | Sbjct: 376 gcgcgatatccggcaccagcgggtcgtcagggttggggtccgtcaacagagagcacacgg 317 Query: 422 acagcagaacctt 434 |||||| |||||| Sbjct: 316 acagcaaaacctt 304
>emb|AL445678.2|LMFL7845 Leishmania major Friedlin chromosome 35 cosmid L7845 Length = 29811 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 362 gcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcg 421 ||||||| |||||||||||||||||||| ||||| |||||||||| ||| ||||| | | Sbjct: 17914 gcgcgatatccggcaccagcgggtcgtcagggttggggtccgtcaacagagagcacacgg 17973 Query: 422 acagcagaacctt 434 |||||| |||||| Sbjct: 17974 acagcaaaacctt 17986
>gb|AY081511.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 479 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || |||||||||| |||||||||||||| ||||||||||||| ||| Sbjct: 350 tcgtcagggtttggatccgtcagcaatgagcatatcgacagaagaaccttggatacggta 291 Query: 445 agggcggggctccactg 461 || || ||||||||||| Sbjct: 290 agtgcagggctccactg 274
>gb|AY059806.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 717 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || |||||||||| |||||||||||||| ||||||||||||| ||| Sbjct: 429 tcgtcagggtttggatccgtcagcaatgagcatatcgacagaagaaccttggatacggta 370 Query: 445 agggcggggctccactg 461 || || ||||||||||| Sbjct: 369 agtgcagggctccactg 353
>gb|AY084220.1| Arabidopsis thaliana clone 10022 mRNA, complete sequence Length = 750 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || |||||||||| |||||||||||||| ||||||||||||| ||| Sbjct: 435 tcgtcagggtttggatccgtcagcaatgagcatatcgacagaagaaccttggatacggta 376 Query: 445 agggcggggctccactg 461 || || ||||||||||| Sbjct: 375 agtgcagggctccactg 359
>gb|DQ027043.1| Arabidopsis thaliana ubiquitinating enzyme (At5g56150) mRNA, complete cds Length = 447 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || |||||||||| |||||||||||||| ||||||||||||| ||| Sbjct: 350 tcgtcagggtttggatccgtcagcaatgagcatatcgacagaagaaccttggatacggta 291 Query: 445 agggcggggctccactg 461 || || ||||||||||| Sbjct: 290 agtgcagggctccactg 274
>dbj|D17786.1|RICKN6922 Oryza sativa KN69 mRNA for ubiquitin-conjugating enzyme, partial CDS Length = 311 Score = 69.9 bits (35), Expect = 7e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||| Sbjct: 279 cttgtacatgtgagcaatctccggcaccaacggatcatcgccgttcgggtccgtcagcag 220 Query: 411 cgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || || |||||||| ||||| |||||||| || || || |||||||| Sbjct: 219 tgaacaaattgacagcaggacctttgatatggtaagtgcaggactccactg 169
>gb|AY082005.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC2) mRNA, complete cds Length = 850 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 356 acatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagc 415 |||||||||| |||||| | || || ||||| || ||||| || || |||| || ||||| Sbjct: 547 acatgtgcgcaatctccagaacaagtgggtcatcagggtttggatcagtcaacaacgagc 488 Query: 416 atatcgacagcagaaccttggatatggtgagggcggggctccactg 461 | ||||| |||||||||||||| ||||| ||||| || |||||||| Sbjct: 487 agatcgagagcagaaccttggaaatggttagggctggactccactg 442
>gb|AY082004.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) mRNA, complete cds Length = 773 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 356 acatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagc 415 ||||||| || |||||||| || || ||||| || ||||| || || |||| || ||||| Sbjct: 568 acatgtgtgcaatctccggaacaagtgggtcatcagggtttggatcagtcaacaacgagc 509 Query: 416 atatcgacagcagaaccttggatatggtgagggcggggctccactg 461 | ||||| |||||||||||||| ||||| ||||| || |||||||| Sbjct: 508 agatcgagagcagaaccttggaaatggttagggctggactccactg 463
>ref|NM_111704.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G08700 mRNA, complete cds Length = 450 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 391 gggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggt 443 ||||||||||| |||||||||||||| ||||||| || |||||||||| |||| Sbjct: 347 gggttcgggtcagtcagcagcgagcaaatcgacaacaaaaccttggatgtggt 295
>gb|BT009605.1| Triticum aestivum clone wre1n.pk0086.d1:fis, full insert mRNA sequence Length = 832 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 361 tgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatc 420 |||||||||||||| || || |||||||| ||||| ||||| || ||||| |||| || Sbjct: 464 tgcgcgatctccgggacaagggggtcgtcggggttggggtcggtgagcagggagctgatg 405 Query: 421 gacagcagaaccttggatatggtgagggcggggctccactg 461 || || || |||||||||||||| || || ||||||||||| Sbjct: 404 gagagtaggaccttggatatggttagcgccgggctccactg 364
>gb|BT024821.1| Arabidopsis thaliana At3g08700 gene, complete cds Length = 450 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 391 gggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggt 443 ||||||||||| |||||||||||||| ||||||| || |||||||||| |||| Sbjct: 347 gggttcgggtcagtcagcagcgagcaaatcgacaacaaaaccttggatgtggt 295
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcag 407 |||| |||||||||| |||||||| || ||||||||||| ||||| ||||||||||| Sbjct: 17797637 cttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 17797693
>emb|BX833149.1|CNS09Z3U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 707 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || |||||||||| |||||||| ||||| ||||||||||||| ||| Sbjct: 418 tcgtcagggtttggatccgtcagcaatgagcatatggacagaagaaccttggatacggta 359 Query: 445 agggcggggctccactg 461 || || ||||||||||| Sbjct: 358 agtgcagggctccactg 342
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcag 407 |||| |||||||||| |||||||| || ||||||||||| ||||| ||||||||||| Sbjct: 2826 cttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 2882
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcag 407 |||| |||||||||| |||||||| || ||||||||||| ||||| ||||||||||| Sbjct: 68059 cttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 68115
>dbj|AK066232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M05, full insert sequence Length = 2141 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcag 407 |||| |||||||||| |||||||| || ||||||||||| ||||| ||||||||||| Sbjct: 1916 cttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 1860
>gb|DQ027026.1| Arabidopsis thaliana ubiquitinating enzyme (At3g08700) mRNA, complete cds Length = 450 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 391 gggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggt 443 ||||||||||| |||||||||||||| ||||||| || |||||||||| |||| Sbjct: 347 gggttcgggtcagtcagcagcgagcaaatcgacaacaaaaccttggatgtggt 295
>ref|NM_111703.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G08690 mRNA, complete cds Length = 724 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| ||| Sbjct: 487 cttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacag 428 Query: 411 cgagcatatcgacagcagaacctt 434 |||||| ||||||| ||||||||| Sbjct: 427 cgagcaaatcgacaacagaacctt 404
>gb|AY220735.1| Hordeum vulgare ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 758 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 486 cttgtacatgtgggcaatctcagggacgagagggtcgtccgggttagggtcggtaagcag 427 Query: 411 cgagcatatcgacagcagaacctt 434 |||||| || || ||||||||||| Sbjct: 426 cgagcagattgaaagcagaacctt 403
>emb|Z14992.1|ATUBC11 A.thaliana UBC11 mRNA for ubiquitin conjugating enzyme homolog Length = 543 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| ||| Sbjct: 294 cttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacag 235 Query: 411 cgagcatatcgacagcagaacctt 434 |||||| ||||||| ||||||||| Sbjct: 234 cgagcaaatcgacaacagaacctt 211
>gb|AY091223.1| Arabidopsis thaliana putative ubiquitin conjugating enzyme 11 (UBC11) (At3g08690) mRNA, complete cds Length = 478 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| ||| Sbjct: 384 cttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacag 325 Query: 411 cgagcatatcgacagcagaacctt 434 |||||| ||||||| ||||||||| Sbjct: 324 cgagcaaatcgacaacagaacctt 301
>gb|AY063869.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC11 (At3g08690) mRNA, complete cds Length = 733 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| ||| Sbjct: 480 cttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacag 421 Query: 411 cgagcatatcgacagcagaacctt 434 |||||| ||||||| ||||||||| Sbjct: 420 cgagcaaatcgacaacagaacctt 397
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 33650 cttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagcag 33709
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 34122268 cttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagcag 34122327 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ctttgagctcgatcgagctgca 269 |||||||||||||||||||||| Sbjct: 605185 ctttgagctcgatcgagctgca 605206
>dbj|AK104783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D03, full insert sequence Length = 1071 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 778 cttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagcag 719
>dbj|AK060954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G05, full insert sequence Length = 1071 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 778 cttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagcag 719
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 39358 cttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagcag 39417
>gb|DQ027025.1| Arabidopsis thaliana ubiquitinating enzyme (At3g08690) mRNA, complete cds Length = 447 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| ||| Sbjct: 384 cttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacag 325 Query: 411 cgagcatatcgacagcagaacctt 434 |||||| ||||||| ||||||||| Sbjct: 324 cgagcaaatcgacaacagaacctt 301
>gb|L00641.1|ATHUBCD Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, 3' end Length = 543 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| ||| Sbjct: 294 cttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacag 235 Query: 411 cgagcatatcgacagcagaacctt 434 |||||| ||||||| ||||||||| Sbjct: 234 cgagcaaatcgacaacagaacctt 211
>ref|NM_191104.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 384 cttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcag 325 Query: 411 cgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 |||||| ||||| |||| ||||| ||||| || | || ||||||||||| Sbjct: 324 cgagcagatcgaaagcaagaccttagatattgtcaaagcagggctccactg 274
>gb|AY389716.1| Hyacinthus orientalis ubiquitin-conjugating enzyme 9 mRNA, partial cds Length = 650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||||||||| || || |||| ||| || || ||||| |||||||||| ||| Sbjct: 361 cttgtacatgtgcgcgatttctggaaccaacggatcatctgggtttgggtccgtcaacag 302 Query: 411 cgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || ||||| || |||| ||||||||| ||||| | ||| || |||||||| Sbjct: 301 agaacatatagagagcaaaaccttggaaatggttaaggcaggactccactg 251
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||||||||| || || || || ||||| ||||| |||| ||| Sbjct: 53349 cttgtacatgtgagctatctccggcacaagaggatcatctgggtttgggtcagtcaacag 53290 Query: 411 cgagcatatcgacagcagaacct 433 |||||| ||||||| |||||||| Sbjct: 53289 cgagcaaatcgacaacagaacct 53267 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 391 gggttcgggtccgtcagcagcgagcatatcgacagcagaacct 433 ||||||||||| |||||||||||||| ||||||| || ||||| Sbjct: 55365 gggttcgggtcagtcagcagcgagcaaatcgacaacaaaacct 55323
>gb|U17250.1|BCSC1 Brassica oleracea ubiquitine conjugating enzyme mRNA, partial cds Length = 607 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 403 gtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 |||||||| ||||||||||| || || |||||||||||||| || || ||||||||||| Sbjct: 275 gtcagcagtgagcatatcgaaagaaggaccttggatatggtaagcgcagggctccactg 217
>gb|AF424641.1| Phytophthora infestans clone MY-03-C-08 ubiquitin-conjugating enzyme mRNA, complete cds Length = 691 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 361 tgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatc 420 |||||||| || ||||| |||||||| || ||||| | |||||| ||||| ||||| ||| Sbjct: 418 tgcgcgatttcgggcacgagcgggtcatctgggttggcgtccgtgagcagtgagcagatc 359 Query: 421 gacagcagaacctt 434 |||||||| ||||| Sbjct: 358 gacagcagcacctt 345
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 384 cttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcag 325 Query: 411 cgagcatatcgacagca 427 |||||| ||||| |||| Sbjct: 324 cgagcagatcgaaagca 308
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 34934788 cttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcag 34934729 Query: 411 cgagcatatcgacagca 427 |||||| ||||| |||| Sbjct: 34934728 cgagcagatcgaaagca 34934712 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 34912605 cttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcag 34912546 Query: 411 cgagcatatcgacagca 427 |||||| ||||| |||| Sbjct: 34912545 cgagcagatcgaaagca 34912529
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 64152 cttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcag 64093 Query: 411 cgagcatatcgacagca 427 |||||| ||||| |||| Sbjct: 64092 cgagcagatcgaaagca 64076 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 41969 cttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcag 41910 Query: 411 cgagcatatcgacagca 427 |||||| ||||| |||| Sbjct: 41909 cgagcagatcgaaagca 41893
>dbj|AK058360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F04, full insert sequence Length = 355 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 |||| ||||||| || ||||| || || || |||||||||||||| ||||| || ||||| Sbjct: 84 cttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcag 25 Query: 411 cgagcatatcgacagca 427 |||||| ||||| |||| Sbjct: 24 cgagcagatcgaaagca 8
>gb|U15971.1|OSU15971 Oryza sativa ubiquitin conjugating enzyme (UBC) gene, complete cds Length = 2088 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 351 cttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcag 407 |||| |||||||||| |||||||| || ||||||||||| ||||| ||| ||||||| Sbjct: 1911 cttgtacatgtgcgccatctccggaactagcgggtcgtctgggtttgggaccgtcag 1855
>gb|AY083611.1| Oryza sativa elicitor and UV light related transcription factor (Elr) mRNA, complete cds Length = 576 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 367 atctccggcaccagcgggtcgtccgggttcgggtccgtcagcag 410 ||||||||||||| ||| || || |||||||||||||||||||| Sbjct: 491 atctccggcaccaacggatcatcggggttcgggtccgtcagcag 448
>gb|AF030296.1|AF030296 Glomerella cingulata ubiquitin conjugating enzyme UBC1 (UBC1) mRNA, complete cds Length = 961 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcgac 423 |||||||| || || ||||| ||||| ||||| ||||||||||||| |||||| || || Sbjct: 576 gcgatctcggggacgagcggttcgtcggggttggggtccgtcagcatcgagcagatggag 517 Query: 424 agcagaaccttggatatggt 443 ||||| ||||| || ||||| Sbjct: 516 agcaggaccttagagatggt 497
>ref|NM_180784.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.2 mRNA, complete cds Length = 909 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 503 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 453
>ref|NM_123535.2| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.4 mRNA, complete cds Length = 803 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 397 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 347
>ref|NM_180783.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.1 mRNA, complete cds Length = 864 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 458 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 408
>gb|DQ222513.1| Solanum tuberosum clone 117E03 ubiquitin conjugating enzyme E2-like mRNA, complete cds Length = 835 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 367 atctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcgacagc 426 ||||||||||||| ||||| || || || ||||| |||||||| || || || || ||| Sbjct: 413 atctccggcaccaaagggtcatcaggattagggtctgtcagcagagaacagatagagagc 354 Query: 427 agaaccttggatatggtgagggcggggctccactg 461 || |||||||| ||||| || || ||||||||||| Sbjct: 353 agtaccttggagatggtaagtgcagggctccactg 319
>ref|XM_749910.1| Aspergillus fumigatus Af293 ubiquitin conjugating enzyme UbcD (Afu3g06030) partial mRNA Length = 444 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 343 cggtcggccttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtcc 402 ||||||| |||| | | ||| |||||||| || |||| ||||||||||||||| ||||| Sbjct: 392 cggtcggtcttgtagacgtgagcgatctcaggtaccaacgggtcgtccgggttagggtct 333 Query: 403 gtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || |||| ||||| ||||| ||||| || || || || || || || ||||||||||| Sbjct: 332 gtgagcattgagcagatcgaaagcagcactttagagattgtaagagcagggctccactg 274
>emb|X73419.1|LEUBC L.esculentum mRNA for ubiquitin conjugating enzyme E2 Length = 686 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 367 atctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcgacagc 426 ||||||||||||| ||||| || || || ||||| |||||||| || || || || ||| Sbjct: 380 atctccggcaccaaagggtcatcgggattagggtctgtcagcagagaacagatagagagc 321 Query: 427 agaaccttggatatggtgagggcggggctccactg 461 || |||||||| ||||| || || ||||||||||| Sbjct: 320 agtaccttggagatggtaagtgcagggctccactg 286
>gb|AY063074.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 8 (At5g41700) mRNA, complete cds Length = 478 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 327 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 277
>gb|AF370257.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC8 (At5g41700) mRNA, complete cds Length = 810 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 452 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 402
>gb|AY072514.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (MBK23.24) mRNA, complete cds Length = 476 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 327 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 277
>gb|AY057631.1| Arabidopsis thaliana AT5g41700/MBK23_24 mRNA, complete cds Length = 653 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 393 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 343
>gb|AY054595.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (ubiquitin-protein ligase 8) (ubiquitin carrier protein 8) (MBK23.24) mRNA, complete cds Length = 755 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 503 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 453
>gb|AF325009.2|AF325009 Arabidopsis thaliana AT5g41700 (AT5g41700/MBK23_24) mRNA, complete cds Length = 667 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 398 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 348
>emb|BX832305.1|CNS0A1WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 650 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 377 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 327
>gb|AY085670.1| Arabidopsis thaliana clone 16865 mRNA, complete sequence Length = 747 Score = 54.0 bits (27), Expect = 4e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 356 acatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagc 415 ||||||| || ||||| ||||| | |||||| || || || || ||||| | |||||| | Sbjct: 510 acatgtgtgcaatctctggcactaacgggtcatctggatttggatccgttaacagcgaac 451 Query: 416 atatcgacagcagaaccttggatatggtgagggcggggctcca 458 ||||||| |||| ||||| || ||||||||||| |||||||| Sbjct: 450 atatcgaaagcaacaccttcgaaatggtgagggcagggctcca 408
>dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unknown protein, complete cds, clone: RAFL16-95-M21 Length = 2157 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 393 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 343
>gb|AY105836.1| Zea mays PCO130472 mRNA sequence Length = 915 Score = 54.0 bits (27), Expect = 4e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 356 acatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagc 415 ||||||| |||||||| || || || |||||||||||||| ||||| || || ||||||| Sbjct: 591 acatgtgggcgatctcagggacaagggggtcgtccgggttggggtcggtgaggagcgagc 532 Query: 416 atatcgacagcagaaccttggatatggtgagggcggggctcca 458 || || || || ||||| |||||||| || || |||||||| Sbjct: 531 tgatggagaggaggacctttgatatggtcagtgcagggctcca 489
>gb|DQ027022.1| Arabidopsis thaliana ubiquitinating enzyme (At5g41700) mRNA, complete cds Length = 447 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 408 cagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||| |||||||| |||| |||||||| ||||||||||| |||||||| Sbjct: 327 cagcgaacatatcgagagcaacaccttggaaatggtgagggcagggctcca 277
>ref|XM_310998.2| Anopheles gambiae str. PEST ENSANGP00000019908 (ENSANGG00000017419), mRNA Length = 707 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 367 atctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcgacagc 426 ||||||||||||||||||||||| ||||| || || || ||| ||||| || |||||| Sbjct: 595 atctccggcaccagcgggtcgtcggggttgggatcacacaacagagagcagatggacagc 536 Query: 427 agaaccttggatatggtgagggcggg 452 | ||||| ||||| || |||||||| Sbjct: 535 aacacctttgatattgtcagggcggg 510
>gb|BT013767.1| Lycopersicon esculentum clone 132651R, mRNA sequence Length = 844 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 391 gggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggt 443 ||||| ||||| |||| ||| ||||| || |||||||| |||||||||||||| Sbjct: 506 gggtttgggtctgtcaacagagagcagatggacagcaggaccttggatatggt 454
>gb|AF154650.1| Nicotiana tabacum clone PR35 mRNA sequence Length = 671 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 397 gggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctc 456 |||||||| ||||| || || || |||| || ||||||||||| ||||| ||||||||| Sbjct: 365 gggtccgttagcagagaacagatagacatgagcaccttggatattgtgagtgcggggctc 306 Query: 457 cactg 461 ||||| Sbjct: 305 cactg 301
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7 Length = 82033 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaacct 433 ||||| ||||| || |||||||||| |||||||||||||| ||||||| Sbjct: 65187 tcgtcagggtttggatccgtcagcaatgagcatatcgacagaagaacct 65139
>gb|DQ284472.1| Solanum tuberosum clone 116D11 ubiquitin-conjugating protein-like mRNA, complete cds Length = 531 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 391 gggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggt 443 ||||| ||||| |||| ||| ||||| || |||||||| |||||||||||||| Sbjct: 266 gggtttgggtctgtcaacagagagcagatggacagcaggaccttggatatggt 214
>gb|L23762.1|TOM1KUC Lycopersicon esculentum ubiquitin carrier protein (Ubc) mRNA, complete cds Length = 825 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 391 gggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggt 443 ||||| ||||| |||| ||| ||||| || |||||||| |||||||||||||| Sbjct: 510 gggtttgggtctgtcaacagagagcagatggacagcaggaccttggatatggt 458
>gb|AY491500.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 779 Score = 48.1 bits (24), Expect = 0.025 Identities = 75/92 (81%) Strand = Plus / Minus Query: 367 atctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcgacagc 426 ||||| || ||||| ||||| || ||||| || ||||||| || ||||| || || ||| Sbjct: 413 atctcaggaaccagagggtcatcggggtttggatccgtcaagagtgagcagattgaaagc 354 Query: 427 agaaccttggatatggtgagggcggggctcca 458 ||||||||||| || || | |||||||||||| Sbjct: 353 agaaccttggaaatagtcaaggcggggctcca 322
>emb|CR646344.2|CNS0EXOU Tetraodon nigroviridis full-length cDNA Length = 1178 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 403 gtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||||| ||||| || ||||| || |||||||| ||||||||||| || ||||| Sbjct: 568 gtcagcagggagcagatggacaggaggaccttggagatggtgagggcaggactcca 513
>emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence Length = 101385 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 403 gtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||||| ||||| || ||||| || |||||||| ||||||||||| || ||||| Sbjct: 39583 gtcagcagggagcagatggacaggaggaccttggagatggtgagggcaggactcca 39528 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 403 gtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctcca 458 |||||||| ||||| || ||||| || |||||||| ||||||||||| || ||||| Sbjct: 32314 gtcagcagggagcagatggacaggaggaccttggagatggtgagggcaggactcca 32259
>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083, complete sequence Length = 120016 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctccactg 461 ||||||||||| |||||||| ||||||||||| Sbjct: 111466 accttggatattgtgagggccgggctccactg 111435
>ref|XM_655273.1| Aspergillus nidulans FGSC A4 ubiquitin-conjugating enzyme E2-16 kDa (AN2761.2), mRNA Length = 444 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Minus Query: 367 atctccggcaccagcgggtcgtccgggttcgggtccgtcagcagcgagcatatcgacagc 426 ||||| |||||||| ||||| |||||||| || || || |||| ||||||||||| ||| Sbjct: 368 atctcaggcaccagagggtcatccgggttgggatctgtgagcatggagcatatcgagagc 309 Query: 427 agaaccttgga 437 || || ||||| Sbjct: 308 agcactttgga 298
>gb|AC182754.1| Gasterosteus aculeatus clone VMRC28-42C14, complete sequence Length = 138028 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 345 gtcggccttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggtt 395 |||||||||| | |||| |||||||| || ||||| |||||||||||||| Sbjct: 11801 gtcggccttgtatgtgtgggcgatctctggtaccagtgggtcgtccgggtt 11851
>ref|XM_471009.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 ctttgagctcgatcgagctgca 269 |||||||||||||||||||||| Sbjct: 1495 ctttgagctcgatcgagctgca 1474
>gb|AY489135.1| Capsicum annuum ubiquitin-conjugating enzyme 8 mRNA, complete cds Length = 713 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Minus Query: 397 gggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctc 456 ||||| || ||||| ||||| |||||||||| |||||||| || || || ||||||||| Sbjct: 397 gggtctgttagcagagagcagatcgacagcaacaccttggaaatcgtaagtgcggggctc 338 Query: 457 ca 458 || Sbjct: 337 ca 336
>emb|CR733525.2|CNS0GSRO Tetraodon nigroviridis full-length cDNA Length = 1352 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 746 gcgatctctggcaccagtgggtcatcagggttcgggtc 709
>emb|CR732722.2|CNS0GSBA Tetraodon nigroviridis full-length cDNA Length = 1355 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 748 gcgatctctggcaccagtgggtcatcagggttcgggtc 711
>emb|CR731170.1|CNS0GR47 Tetraodon nigroviridis full-length cDNA Length = 1336 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 738 gcgatctctggcaccagtgggtcatcagggttcgggtc 701
>emb|CR728345.2|CNS0GOXR Tetraodon nigroviridis full-length cDNA Length = 1345 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 746 gcgatctctggcaccagtgggtcatcagggttcgggtc 709
>emb|CR724467.2|CNS0GLY1 Tetraodon nigroviridis full-length cDNA Length = 1349 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 746 gcgatctctggcaccagtgggtcatcagggttcgggtc 709
>emb|CR708686.2|CNS0G9RU Tetraodon nigroviridis full-length cDNA Length = 654 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 54 gcgatctctggcaccagtgggtcatcagggttcgggtc 17
>emb|CR673935.2|CNS0FIZ9 Tetraodon nigroviridis full-length cDNA Length = 1374 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 736 gcgatctctggcaccagtgggtcatcagggttcgggtc 699
>emb|CR661341.2|CNS0F99F Tetraodon nigroviridis full-length cDNA Length = 1098 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 735 gcgatctctggcaccagtgggtcatcagggttcgggtc 698
>emb|CR648302.2|CNS0EZ78 Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 732 gcgatctctggcaccagtgggtcatcagggttcgggtc 695
>emb|CR647212.2|CNS0EYCY Tetraodon nigroviridis full-length cDNA Length = 1080 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||||| |||||||| ||||| || ||||||||||| Sbjct: 714 gcgatctctggcaccagtgggtcatcagggttcgggtc 677
>emb|Z14991.1|ATUBC10 A.thaliana UBC10 mRNA for ubiquitin conjugating enzyme homolog Length = 818 Score = 44.1 bits (22), Expect = 0.40 Identities = 133/170 (78%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||| ||||| || ||||||| | || |||||||||||| || || ||| | | Sbjct: 575 cccatggcatacttctgagtccagcttcgtgcagtggactcgtacttgttcttgtcagtc 516 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || ||||| ||||||| || || |||||||| || || || | || Sbjct: 515 ttgtacatgtgagctatctcgggcaccaaaggatcatccgggtttggatcggttaacaaa 456 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || ||||| ||||| |||||||| |||||||| || || |||||||| Sbjct: 455 gaacagatcgatagcagcaccttggaaatggtgagcgcaggactccactg 406
>gb|AY113937.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 478 Score = 44.1 bits (22), Expect = 0.40 Identities = 133/170 (78%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||| ||||| || ||||||| | || |||||||||||| || || ||| | | Sbjct: 443 cccatggcatacttctgagtccagcttcgtgcagtggactcgtacttgttcttgtcagtc 384 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || ||||| ||||||| || || |||||||| || || || | || Sbjct: 383 ttgtacatgtgagctatctcgggcaccaaaggatcatccgggtttggatcggttaacaaa 324 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || ||||| ||||| |||||||| |||||||| || || |||||||| Sbjct: 323 gaacagatcgatagcagcaccttggaaatggtgagcgcaggactccactg 274
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ctttgagctcgatcgagctgca 269 |||||||||||||||||||||| Sbjct: 136152 ctttgagctcgatcgagctgca 136173
>gb|AY129488.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 447 Score = 44.1 bits (22), Expect = 0.40 Identities = 133/170 (78%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||| ||||| || ||||||| | || |||||||||||| || || ||| | | Sbjct: 443 cccatggcatacttctgagtccagcttcgtgcagtggactcgtacttgttcttgtcagtc 384 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || ||||| ||||||| || || |||||||| || || || | || Sbjct: 383 ttgtacatgtgagctatctcgggcaccaaaggatcatccgggtttggatcggttaacaaa 324 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || ||||| ||||| |||||||| |||||||| || || |||||||| Sbjct: 323 gaacagatcgatagcagcaccttggaaatggtgagcgcaggactccactg 274
>gb|AY083170.1| Malus x domestica ubiquitin conjugating-like enzyme mRNA, partial cds Length = 174 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Minus Query: 356 acatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagca 409 ||||||| |||||||||||||| || ||||| || || || ||||| ||||||| Sbjct: 63 acatgtgggcgatctccggcacgagagggtcatcaggatttgggtcagtcagca 10
>emb|BX833981.1|CNS0A0DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 769 Score = 44.1 bits (22), Expect = 0.40 Identities = 133/170 (78%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||| ||||| || ||||||| | || |||||||||||| || || ||| | | Sbjct: 530 cccatggcatacttctgagtccagcttcgtgcagtggactcgtacttgttcttgtcagtc 471 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || ||||| ||||||| || || |||||||| || || || | || Sbjct: 470 ttgtacatgtgagctatctcgggcaccaaaggatcatccgggtttggatcggttaacaaa 411 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || ||||| ||||| |||||||| |||||||| || || |||||||| Sbjct: 410 gaacagatcgatagcagcaccttggaaatggtgagcgcaggactccactg 361
>dbj|AK103144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120H12, full insert sequence Length = 2559 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 ctttgagctcgatcgagctgca 269 |||||||||||||||||||||| Sbjct: 1705 ctttgagctcgatcgagctgca 1684
>dbj|AK073722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060P16, full insert sequence Length = 2498 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 ctttgagctcgatcgagctgca 269 |||||||||||||||||||||| Sbjct: 1705 ctttgagctcgatcgagctgca 1684
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ctttgagctcgatcgagctgca 269 |||||||||||||||||||||| Sbjct: 80156 ctttgagctcgatcgagctgca 80177
>gb|DQ027024.1| Arabidopsis thaliana ubiquitinating enzyme (At5g53300) mRNA, complete cds Length = 447 Score = 44.1 bits (22), Expect = 0.40 Identities = 133/170 (78%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||| ||||| || ||||||| | || |||||||||||| || || ||| | | Sbjct: 443 cccatggcatacttctgagtccagcttcgtgcagtggactcgtacttgttcttgtcagtc 384 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || ||||| ||||||| || || |||||||| || || || | || Sbjct: 383 ttgtacatgtgagctatctcgggcaccaaaggatcatccgggtttggatcggttaacaaa 324 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || ||||| ||||| |||||||| |||||||| || || |||||||| Sbjct: 323 gaacagatcgatagcagcaccttggaaatggtgagcgcaggactccactg 274
>gb|DQ249816.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 678 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Minus Query: 397 gggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtgagggcggggctc 456 ||||| || ||||| ||||| |||||||||| |||||||| || || || ||||||||| Sbjct: 408 gggtctgttagcagagagcagatcgacagcaacaccttggaaatcgtaagtgcggggctc 349 Query: 457 ca 458 || Sbjct: 348 ca 347
>gb|L00640.1|ATHUBCC Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 818 Score = 44.1 bits (22), Expect = 0.40 Identities = 133/170 (78%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagcccctggccgtggactcgtacctggtccggtcggcc 351 |||||||| ||||| || ||||||| | || |||||||||||| || || ||| | | Sbjct: 575 cccatggcatacttctgagtccagcttcgtgcagtggactcgtacttgttcttgtcagtc 516 Query: 352 ttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtccgtcagcagc 411 ||| ||||||| || ||||| ||||||| || || |||||||| || || || | || Sbjct: 515 ttgtacatgtgagctatctcgggcaccaaaggatcatccgggtttggatcggttaacaaa 456 Query: 412 gagcatatcgacagcagaaccttggatatggtgagggcggggctccactg 461 || || ||||| ||||| |||||||| |||||||| || || |||||||| Sbjct: 455 gaacagatcgatagcagcaccttggaaatggtgagcgcaggactccactg 406
>ref|NM_180785.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.3 mRNA, complete cds Length = 1006 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctcca 458 |||||||| ||||||||||| |||||||| Sbjct: 385 accttggaaatggtgagggcagggctcca 357
>ref|NM_200959.2| Danio rerio zgc:55886 (zgc:55886), mRNA Length = 1935 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 382 gggtcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatg 441 ||||||||||| || ||||| |||||| ||||| || ||||| ||||| ||||| ||| Sbjct: 600 gggtcgtccggattagggtcacacagcagggagcagatggacaggagaactttggagatg 541 Query: 442 gtgag 446 ||||| Sbjct: 540 gtgag 536
>emb|CR650501.2|CNS0F0WB Tetraodon nigroviridis full-length cDNA Length = 974 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 349 gccttgcacatgtgcgcgatctccggcaccagcgggtcgtccgggttcgggtc 401 |||||| || |||| ||||| || || ||||||||||||||||| || ||||| Sbjct: 298 gccttgtacgtgtgagcgatttctggtaccagcgggtcgtccggattagggtc 246
>emb|Z14989.1|ATUBC8 A.thaliana UBC8 gene for ubiquitin conjugating enzyme homolog Length = 1447 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctcca 458 |||||||| ||||||||||| |||||||| Sbjct: 943 accttggaaatggtgagggcagggctcca 915
>gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 853 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 292 cccatggcgtacttgtgcgtccagc 316 |||||||||||||| |||||||||| Sbjct: 583 cccatggcgtacttctgcgtccagc 559
>gb|BC065678.1| Danio rerio zgc:55886, mRNA (cDNA clone MGC:77149 IMAGE:6961245), complete cds Length = 1935 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 382 gggtcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatg 441 ||||||||||| || ||||| |||||| ||||| || ||||| ||||| ||||| ||| Sbjct: 600 gggtcgtccggattagggtcacacagcagggagcagatggacaggagaactttggagatg 541 Query: 442 gtgag 446 ||||| Sbjct: 540 gtgag 536
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 370 tccggcaccagcgggtcgtccgggttcgggtccgtca 406 ||||| |||| ||||||||||||||| | |||||||| Sbjct: 960499 tccggaaccaacgggtcgtccgggttggcgtccgtca 960535
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctcca 458 |||||||| ||||||||||| |||||||| Sbjct: 71843 accttggaaatggtgagggcagggctcca 71815
>ref|NM_210385.1| Eremothecium gossypii AER173Cp (AER173C), mRNA Length = 444 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 370 tccggcaccagcgggtcgtccgggttcgggtccgtca 406 ||||| |||| ||||||||||||||| | |||||||| Sbjct: 365 tccggaaccaacgggtcgtccgggttggcgtccgtca 329
>gb|L00638.1|ATHUBCA Arabidopsis thaliana ubiquitin conjugating enzyme exons 2-4 Length = 1447 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 430 accttggatatggtgagggcggggctcca 458 |||||||| ||||||||||| |||||||| Sbjct: 943 accttggaaatggtgagggcagggctcca 915
>ref|NM_001036151.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G64230 transcript variant AT1G64230.2 mRNA, complete cds Length = 885 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 442 catatcgaaagcaaaaccttcgatatggtgag 411
>ref|NM_105097.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G64230 transcript variant AT1G64230.1 mRNA, complete cds Length = 846 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 454 catatcgaaagcaaaaccttcgatatggtgag 423
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 6.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || || |||||||||||||| | || |||| ||||| || |||||| Sbjct: 328603 tcgtcagggttgggatctgtcagcagcgagcagacggagagcaacaccttcgagatggtg 328544 Query: 445 agggcggg 452 |||||||| Sbjct: 328543 agggcggg 328536
>gb|AY682844.1| Human coxsackievirus B5 isolate B 92746 polyprotein gene, partial cds Length = 1375 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 gtcggccttgcacatgtgcgcgatctcc 372 |||||| ||||| ||||||||||||||| Sbjct: 718 gtcggctttgcagatgtgcgcgatctcc 745
>gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8, complete sequence Length = 140539 Score = 40.1 bits (20), Expect = 6.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || || |||||||||||||| | || |||| ||||| || |||||| Sbjct: 64923 tcgtcagggttgggatctgtcagcagcgagcagacggagagcaacaccttcgagatggtg 64982 Query: 445 agggcggg 452 |||||||| Sbjct: 64983 agggcggg 64990
>gb|BC076483.1| Danio rerio zgc:92467, mRNA (cDNA clone MGC:92467 IMAGE:7043653), complete cds Length = 1420 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 412 gagcatatcgacagcagaaccttggatatggt 443 ||||| || |||||||| |||||||||||||| Sbjct: 527 gagcagatggacagcagcaccttggatatggt 496
>ref|XM_819286.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 ubiquitin-conjugating enzyme E2 (Tb927.5.1000) partial mRNA Length = 447 Score = 40.1 bits (20), Expect = 6.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 385 tcgtccgggttcgggtccgtcagcagcgagcatatcgacagcagaaccttggatatggtg 444 ||||| ||||| || || |||||||||||||| | || |||| ||||| || |||||| Sbjct: 353 tcgtcagggttgggatctgtcagcagcgagcagacggagagcaacaccttcgagatggtg 294 Query: 445 agggcggg 452 |||||||| Sbjct: 293 agggcggg 286
>emb|CR652711.2|CNS0F2LP Tetraodon nigroviridis full-length cDNA Length = 910 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 349 gccttgcacatgtgcgcgatctccggcaccagcgggtcgtccgg 392 |||||| || |||| ||||| || || ||||||||||||||||| Sbjct: 295 gccttgtacgtgtgagcgatttctggtaccagcgggtcgtccgg 252
>emb|AL445230.11| Human DNA sequence from clone RP11-517F10 on chromosome 1 Contains the 5' end of the COPA gene for coatomer protein complex subunit alpha, the gene for nicastrin (KIAA0253), the NHLH1 gene for nescient helix loop helix 1, the VANGL2 gene for vang-like 2 (van gogh, Drosophila) and a CpG island, complete sequence Length = 102345 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 cataagcactttccacatct 249 |||||||||||||||||||| Sbjct: 55298 cataagcactttccacatct 55279
>emb|AL035669.43|HS885L7 Human DNA sequence from clone RP5-885L7 on chromosome 20q13.2-13.33 Contains the 3' end of the NTSR1 gene for high affinity neurotensin receptor 1, the C20orf20 gene, the OGFR gene for opioid growth factor receptor, the COL9A3 gene for collagen IX alpha 3, the C20orf143 gene, the TCFL5 gene for basic helix-loop-helix transcription factor-like 5, the ARF4P2 gene for ADP-ribosylation factor 4 pseudogene 2, the 3' end of the DATF1 gene for death associated transcription factor 1, two novel genes and seven CpG islands, complete sequence Length = 160241 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ctggccgtggactcgtacct 338 |||||||||||||||||||| Sbjct: 87956 ctggccgtggactcgtacct 87937
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gcgcgatctccggcaccagc 381 |||||||||||||||||||| Sbjct: 1677132 gcgcgatctccggcaccagc 1677151
>ref|NM_001003494.1| Danio rerio zgc:92467 (zgc:92467), mRNA Length = 1420 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 412 gagcatatcgacagcagaaccttggatatggt 443 ||||| || |||||||| |||||||||||||| Sbjct: 527 gagcagatggacagcagcaccttggatatggt 496
>gb|AY133670.1| Arabidopsis thaliana At1g64230/F22C12_17 mRNA, complete cds Length = 447 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 320 catatcgaaagcaaaaccttcgatatggtgag 289
>gb|AC100835.2| Homo sapiens chromosome 15, clone CTD-3154N5, complete sequence Length = 165036 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 ggatatggtgagggcggggc 454 |||||||||||||||||||| Sbjct: 64323 ggatatggtgagggcggggc 64304
>gb|AC068727.8| Homo sapiens chromosome 15 clone RP11-90M11 map 15q15, complete sequence Length = 175808 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagcactttccacatctttg 252 |||||||||||||||||||| Sbjct: 77284 aagcactttccacatctttg 77303
>gb|AF480945.1| Arabidopsis thaliana ubiquitin conjugating enzyme UBC9A (UBC9A) mRNA, complete cds Length = 723 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 407 catatcgaaagcaaaaccttcgatatggtgag 376
>gb|AF385718.1|AF385718 Arabidopsis thaliana At1g64230/F22C12_17 mRNA, complete cds Length = 738 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 446 catatcgaaagcaaaaccttcgatatggtgag 415
>emb|BX815683.1|CNS0ABHQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 776 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 424 catatcgaaagcaaaaccttcgatatggtgag 393
>emb|BX815644.1|CNS0ABEX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 1224 catatcgaaagcaaaaccttcgatatggtgag 1193
>emb|BX816916.1|CNS0ABT7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 467 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 154 catatcgaaagcaaaaccttcgatatggtgag 123
>emb|BX816699.1|CNS0ABXP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 782 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 453 catatcgaaagcaaaaccttcgatatggtgag 422
>gb|AC154434.2| Mus musculus BAC clone RP24-185H5 from chromosome 9, complete sequence Length = 192358 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tatttagttatatctacccc 294 |||||||||||||||||||| Sbjct: 74447 tatttagttatatctacccc 74466
>emb|BX681417.10| Zebrafish DNA sequence from clone DKEY-161L11 in linkage group 2, complete sequence Length = 233760 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cataagcactttccacatct 249 |||||||||||||||||||| Sbjct: 175189 cataagcactttccacatct 175208
>gb|AF026802.1|HSCOL9A3S2 Homo sapiens alpha-3 type IX collagen (COL9A3) gene, exons 27-32, and complete cds Length = 6246 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ctggccgtggactcgtacct 338 |||||||||||||||||||| Sbjct: 3875 ctggccgtggactcgtacct 3856
>gb|DQ027041.1| Arabidopsis thaliana ubiquitinating enzyme (At1g64230) mRNA, complete cds Length = 447 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 catatcgacagcagaaccttggatatggtgag 446 |||||||| |||| |||||| ||||||||||| Sbjct: 320 catatcgaaagcaaaaccttcgatatggtgag 289
>dbj|AB242223.1| Eptatretus burgeri IgSF3 mRNA for immunoglobulin superfamily 3, complete cds Length = 3876 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 gcagaaccttggatatggtgaggg 448 |||||||||||||||| ||||||| Sbjct: 968 gcagaaccttggatatagtgaggg 945 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,845,912 Number of Sequences: 3902068 Number of extensions: 2845912 Number of successful extensions: 86856 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 86552 Number of HSP's gapped (non-prelim): 304 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
