Clone Name | rbart37c02 |
---|---|
Clone Library Name | barley_pub |
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 105 tactcatggactacatttcgagttctcgacaaaagc 140 |||||||||||||||||||| |||||||| |||||| Sbjct: 67238 tactcatggactacatttcgtgttctcgataaaagc 67203
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 105 tactcatggactacatttcgagttctcgacaaaagc 140 |||||||||||||||||||| |||||||| |||||| Sbjct: 16426801 tactcatggactacatttcgtgttctcgataaaagc 16426766
>dbj|AK066244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L05, full insert sequence Length = 1138 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 105 tactcatggactacatttcgagttctcgacaaaagc 140 |||||||||||||||||||| |||||||| |||||| Sbjct: 991 tactcatggactacatttcgtgttctcgataaaagc 956
>dbj|AK059176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-F06, full insert sequence Length = 655 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 105 tactcatggactacatttcgagttctcgacaaaagc 140 |||||||||||||||||||| |||||||| |||||| Sbjct: 514 tactcatggactacatttcgtgttctcgataaaagc 479
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatggg 296 ||||||||||||||||||||||| Sbjct: 462215 aagttctcagcatatgtcatggg 462193
>gb|AC087265.2| Pan troglodytes clone RP43-22H1, complete sequence Length = 136362 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatggg 296 ||||||||||||||||||||||| Sbjct: 133571 aagttctcagcatatgtcatggg 133549
>gb|AC087253.2| Pan troglodytes clone RP43-150N20, complete sequence Length = 126559 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatggg 296 ||||||||||||||||||||||| Sbjct: 5435 aagttctcagcatatgtcatggg 5413
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatggg 296 ||||||||||||||||||||||| Sbjct: 381329 aagttctcagcatatgtcatggg 381307
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatggg 296 ||||||||||||||||||||||| Sbjct: 353325 aagttctcagcatatgtcatggg 353303
>gb|AC002080.1|AC002080 Human BAC clone CTA-253B13 from 7q31-q32, complete sequence Length = 171905 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatggg 296 ||||||||||||||||||||||| Sbjct: 9819 aagttctcagcatatgtcatggg 9797
>gb|AF125348.1|AF125348 Homo sapiens caveolin 1 (CAV1) gene, exon 3 and partial cds Length = 65192 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatggg 296 ||||||||||||||||||||||| Sbjct: 62122 aagttctcagcatatgtcatggg 62100
>gb|AC164925.3| Colobus guereza clone CH272-271L4, complete sequence Length = 199954 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatgg 295 |||||||||||||||||||||| Sbjct: 107289 aagttctcagcatatgtcatgg 107268
>gb|AC084729.2| Papio anubis clone RP41-12N1, complete sequence Length = 208707 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatgg 295 |||||||||||||||||||||| Sbjct: 19126 aagttctcagcatatgtcatgg 19105
>gb|AC123965.3| Macaca mulatta clone CH250-564L7, complete sequence Length = 113368 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatgg 295 |||||||||||||||||||||| Sbjct: 96642 aagttctcagcatatgtcatgg 96621
>emb|AL645726.22| Mouse DNA sequence from clone RP23-45M23 on chromosome 1, complete sequence Length = 231347 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 aaacccaaaatgttccaaactc 102 |||||||||||||||||||||| Sbjct: 9209 aaacccaaaatgttccaaactc 9188
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatgg 295 |||||||||||||||||||||| Sbjct: 393767 aagttctcagcatatgtcatgg 393746
>gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, complete sequence Length = 196952 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 ccaaaatgttccaaactcaata 106 |||||||||||||||||||||| Sbjct: 173202 ccaaaatgttccaaactcaata 173223
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatgg 295 |||||||||||||||||||||| Sbjct: 416577 aagttctcagcatatgtcatgg 416556
>gb|AC142557.3| Cercopithecus aethiops clone CH252-402M4, complete sequence Length = 150854 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 274 aagttctcagcatatgtcatgg 295 |||||||||||||||||||||| Sbjct: 31270 aagttctcagcatatgtcatgg 31249
>gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosome 6, complete sequence Length = 162905 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 aaaatgttccaaactcaatac 107 ||||||||||||||||||||| Sbjct: 130198 aaaatgttccaaactcaatac 130218
>gb|AC121924.3| Mus musculus BAC clone RP24-198P16 from chromosome 2, complete sequence Length = 177062 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaatac 207 ||||||||||||||||||||| Sbjct: 151189 tttacatataacaataaatac 151169
>gb|AC151055.3| Mus musculus BAC clone RP23-24A9 from 6, complete sequence Length = 230998 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 aaaatgttccaaactcaatac 107 ||||||||||||||||||||| Sbjct: 26233 aaaatgttccaaactcaatac 26253
>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete sequence Length = 194209 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaatac 207 ||||||||||||||||||||| Sbjct: 77470 tttacatataacaataaatac 77490
>dbj|AP006361.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT46P17, TM0137, complete sequence Length = 102271 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 atatagggtaatttatataagttgt 36 ||||||||||| ||||||||||||| Sbjct: 18664 atatagggtaaattatataagttgt 18640
>emb|AL160234.3|CNS01RGY Human chromosome 14 DNA sequence BAC R-22F22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155735 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 caaaatgttccaaactcaata 106 ||||||||||||||||||||| Sbjct: 155215 caaaatgttccaaactcaata 155235
>ref|NM_105085.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G64110 transcript variant AT1G64110.1 mRNA, complete cds Length = 2868 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tccttggatgattcctcctt 454 |||||||||||||||||||| Sbjct: 1577 tccttggatgattcctcctt 1558
>ref|NM_179511.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G64110 transcript variant AT1G64110.2 mRNA, complete cds Length = 2886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tccttggatgattcctcctt 454 |||||||||||||||||||| Sbjct: 1595 tccttggatgattcctcctt 1576
>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 10216 tttacatataacaataaata 10197
>gb|AC117585.8| Mus musculus chromosome 5, clone RP23-155F13, complete sequence Length = 215745 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 151834 tttacatataacaataaata 151815
>gb|AC152826.2| Mus musculus BAC clone RP23-111C21 from chromosome 8, complete sequence Length = 196497 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 161751 tttacatataacaataaata 161770
>gb|AC164703.3| Mus musculus BAC clone RP23-266K19 from chromosome 7, complete sequence Length = 238433 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 32612 ttacatataacaataaatac 32593
>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence Length = 230584 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 142169 tttacatataacaataaata 142150
>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete sequence Length = 213720 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 206713 tttacatataacaataaata 206732
>ref|XM_951152.1| Neurospora crassa OR74A hypothetical protein (NCU01542.1) partial mRNA Length = 4077 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 tctccttggatgattcctcctttg 456 ||||||||||||||||| |||||| Sbjct: 1150 tctccttggatgattccgcctttg 1127
>ref|XM_327980.1| Neurospora crassa OR74A hypothetical protein (NCU01542.1) partial mRNA Length = 4077 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 tctccttggatgattcctcctttg 456 ||||||||||||||||| |||||| Sbjct: 1150 tctccttggatgattccgcctttg 1127
>gb|AC139568.5| Mus musculus chromosome 12, clone RP23-208G5, complete sequence Length = 202882 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 22195 tttacatataacaataaata 22176
>gb|AC167135.3| Mus musculus chromosome 1, clone RP24-335L18, complete sequence Length = 157775 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 121772 tttacatataacaataaata 121791
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 49993 tttacatataacaataaata 50012
>gb|AC136641.3| Mus musculus BAC clone RP23-313G19 from chromosome 7, complete sequence Length = 215208 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 agaataatatagggtaattt 25 |||||||||||||||||||| Sbjct: 205138 agaataatatagggtaattt 205157
>gb|AC131669.3| Mus musculus BAC clone RP23-307E9 from chromosome 7, complete sequence Length = 189956 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 agaataatatagggtaattt 25 |||||||||||||||||||| Sbjct: 40716 agaataatatagggtaattt 40735
>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence Length = 177231 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 42109 tttacatataacaataaata 42128
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence Length = 186155 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 38781 tttacatataacaataaata 38800
>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence Length = 169596 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 32681 tttacatataacaataaata 32700
>gb|AC119886.7| Mus musculus chromosome 14, clone RP24-218I13, complete sequence Length = 138803 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 93954 tttacatataacaataaata 93935
>gb|AC163616.3| Mus musculus BAC clone RP23-114P22 from chromosome 3, complete sequence Length = 212857 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 94095 tttacatataacaataaata 94114
>gb|AC160101.7| Mus musculus chromosome 1, clone RP24-126E20, complete sequence Length = 159705 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 30509 tttacatataacaataaata 30490
>gb|AC084287.9| Mus Musculus S train C57BL6/J chromosome 1 BAC, RP23-145H3 Complete Sequence, complete sequence Length = 201429 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 195646 ttacatataacaataaatac 195665
>gb|AC127419.3| Mus musculus BAC clone RP24-242N1 from chromosome 8, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 163432 tttacatataacaataaata 163413
>gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 1 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 atattttacatataacaata 202 |||||||||||||||||||| Sbjct: 148048 atattttacatataacaata 148067
>gb|AC098726.2| Mus musculus BAC clone RP23-3E20 from 17, complete sequence Length = 195690 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 191665 tttacatataacaataaata 191684
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 57859 tttacatataacaataaata 57878
>gb|AC108416.5| Mus musculus chromosome 14, clone RP23-114J12, complete sequence Length = 227555 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 176497 ttacatataacaataaatac 176478
>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence Length = 198636 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 94287 ttacatataacaataaatac 94268
>gb|AC110573.11| Mus musculus chromosome 16, clone RP23-322A15, complete sequence Length = 190173 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 148354 tttacatataacaataaata 148373
>gb|AC102145.3| Mus musculus chromosome 6, clone RP23-302K3, complete sequence Length = 199882 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 134783 tttacatataacaataaata 134764
>gb|AC152061.6| Mus musculus BAC clone RP23-351K4 from chromosome 12, complete sequence Length = 206383 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 106975 tttacatataacaataaata 106994
>gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosome 7, complete sequence Length = 223522 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 199979 tttacatataacaataaata 199998
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ggttgtcgcggctttggttt 429 |||||||||||||||||||| Sbjct: 1204473 ggttgtcgcggctttggttt 1204492
>emb|AL356964.12| Human DNA sequence from clone RP3-437L21 on chromosome 6, complete sequence Length = 24347 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 atattttacatataacaata 202 |||||||||||||||||||| Sbjct: 10962 atattttacatataacaata 10943
>emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chromosome 13 Contains the SLC10A2 gene for solute carrier family 10 (sodium/bile acid cotransporter family, member 2, complete sequence Length = 171132 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 atattttacatataacaata 202 |||||||||||||||||||| Sbjct: 129233 atattttacatataacaata 129252
>emb|CR382399.1| Plasmodium falciparum chromosome 6, complete sequence; segment 2/5 Length = 348174 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 tattttacatataacaataaatac 207 ||||||| |||||||||||||||| Sbjct: 159204 tattttatatataacaataaatac 159227
>gb|AC132086.4| Mus musculus BAC clone RP24-556M16 from chromosome 10, complete sequence Length = 182855 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 148845 ttacatataacaataaatac 148826
>emb|AL670002.1|NCB24G3 Neurospora crassa DNA linkage group II BAC clone B24G3 Length = 77166 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 tctccttggatgattcctcctttg 456 ||||||||||||||||| |||||| Sbjct: 38305 tctccttggatgattccgcctttg 38282
>emb|AL662875.14| Mouse DNA sequence from clone RP23-67E18 on chromosome 11 Contains the 3' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik), the Ugalt2 gene for UDP-galactose translocator 2, the Spop gene for speckle-type POZ protein, the Nxph3 gene for neurexophilin 3, the Ngfr gene for nerve growth factor receptor (TNFR superfamily, member 16), the 5' end of a novel gene and a CpG island, complete sequence Length = 255199 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 106077 tttacatataacaataaata 106058
>gb|AC161417.5| Mus musculus BAC clone RP23-325H23 from chromosome 6, complete sequence Length = 173502 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 149951 tttacatataacaataaata 149970
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 cgttctgatgtgcgctgctc 391 |||||||||||||||||||| Sbjct: 2030577 cgttctgatgtgcgctgctc 2030596
>dbj|AK138091.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130090H13 product:unclassifiable, full insert sequence Length = 1108 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 65 tttacatataacaataaata 84
>gb|AC007937.18| Mus musculus chromosome 10, clone RP21-536F4, complete sequence Length = 205015 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 169800 tttacatataacaataaata 169781
>gb|AY062592.1| Arabidopsis thaliana similar to homeobox protein (At1g64110; F22C12.12) mRNA, partial cds Length = 2484 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tccttggatgattcctcctt 454 |||||||||||||||||||| Sbjct: 1595 tccttggatgattcctcctt 1576
>gb|AC158618.5| Mus musculus 10 BAC RP23-280M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 235639 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 144335 tttacatataacaataaata 144316
>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence Length = 220437 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 80576 tttacatataacaataaata 80557
>gb|AY056097.1| Arabidopsis thaliana At1g64110/F22C12_22 mRNA, complete cds Length = 2828 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tccttggatgattcctcctt 454 |||||||||||||||||||| Sbjct: 1577 tccttggatgattcctcctt 1558
>gb|BT006360.1| Arabidopsis thaliana At1g64110/F22C12_22 gene, complete cds Length = 2475 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tccttggatgattcctcctt 454 |||||||||||||||||||| Sbjct: 1352 tccttggatgattcctcctt 1333
>gb|AC132415.4| Mus musculus BAC clone RP23-246C16 from chromosome 10, complete sequence Length = 173182 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 44765 tttacatataacaataaata 44784
>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence Length = 168628 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 69690 tttacatataacaataaata 69671
>gb|AC157948.5| Mus musculus BAC clone RP23-197K17 from chromosome 7, complete sequence Length = 201846 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 111809 ttacatataacaataaatac 111790
>gb|AC025913.11| Mus musculus 10 BAC RP23-287L13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228124 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 221260 tttacatataacaataaata 221241
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 16225 tttacatataacaataaata 16206
>gb|AC093752.2| Homo sapiens BAC clone RP11-33B1 from 4, complete sequence Length = 130879 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aaaacccaaaatgttccaaa 99 |||||||||||||||||||| Sbjct: 105134 aaaacccaaaatgttccaaa 105115
>gb|AC116764.10| Mus musculus chromosome 15, clone RP23-388P12, complete sequence Length = 217156 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 116462 ttacatataacaataaatac 116443
>gb|AC012302.5|AC012302 Mus musculus chromosome 10, clone RP21-247L16, complete sequence Length = 130427 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 82508 tttacatataacaataaata 82489
>emb|AL845349.13| Mouse DNA sequence from clone RP23-311F6 on chromosome 2, complete sequence Length = 180824 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 108880 tttacatataacaataaata 108861
>gb|AC006584.12|AC006584 Mus musculus BAC GSMB-407A4 (Genome Systems Mouse BAC Library) complete sequence Length = 160288 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 52684 tttacatataacaataaata 52665
>gb|AC118731.11| Mus musculus chromosome 1, clone RP24-169M20, complete sequence Length = 160688 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 38333 ttacatataacaataaatac 38352
>gb|U62765.1|MMU62765 Mus musculus meprin A alpha subunit (Mep1a) gene, partial cds Length = 10824 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ttggtttctgtctccttgga 442 |||||||||||||||||||| Sbjct: 9298 ttggtttctgtctccttgga 9279
>gb|AC149605.7| Mus musculus BAC clone RP23-473E20 from 7, complete sequence Length = 195585 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 16047 ttacatataacaataaatac 16066
>gb|AC137513.3| Mus musculus BAC clone RP24-460O22 from 15, complete sequence Length = 179386 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 82063 ttacatataacaataaatac 82044
>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence Length = 195652 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 186932 tttacatataacaataaata 186913
>gb|AC139382.3| Mus musculus BAC clone RP23-30B24 from 12, complete sequence Length = 180698 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 123283 tttacatataacaataaata 123264
>gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complete sequence Length = 261825 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 122152 ttacatataacaataaatac 122133
>gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, complete sequence Length = 211504 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 47101 tttacatataacaataaata 47082
>gb|AC149283.2| Mus musculus BAC clone RP23-233O21 from 7, complete sequence Length = 223763 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 88487 ttacatataacaataaatac 88506
>gb|AC141895.4| Mus musculus BAC clone RP23-299L22 from 10, complete sequence Length = 178358 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 154030 ttacatataacaataaatac 154049
>gb|AC172193.2| Mus musculus chromosome 7, clone RP24-224F23, complete sequence Length = 205619 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 160918 ttacatataacaataaatac 160937
>emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chromosome 2, complete sequence Length = 195221 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 185414 tttacatataacaataaata 185433
>emb|AL672269.15| Mouse DNA sequence from clone RP23-57F11 on chromosome 11, complete sequence Length = 169954 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 17926 tttacatataacaataaata 17945
>emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chromosome 2, complete sequence Length = 184736 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 90674 ttacatataacaataaatac 90655
>emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on chromosome 4, complete sequence Length = 209764 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 159884 tttacatataacaataaata 159865
>emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chromosome 1, complete sequence Length = 259487 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 4095 tttacatataacaataaata 4114
>gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, complete sequence Length = 250160 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 47346 tttacatataacaataaata 47365
>gb|AC168051.3| Mus musculus BAC clone RP23-169M5 from chromosome 8, complete sequence Length = 222981 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttacatataacaataaatac 207 |||||||||||||||||||| Sbjct: 100901 ttacatataacaataaatac 100920
>emb|AL806534.3| Mouse DNA sequence from clone RP23-334A11 on chromosome X, complete sequence Length = 130689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttacatataacaataaata 206 |||||||||||||||||||| Sbjct: 56806 tttacatataacaataaata 56787 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,893,597 Number of Sequences: 3902068 Number of extensions: 4893597 Number of successful extensions: 96870 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96567 Number of HSP's gapped (non-prelim): 303 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)