Clone Information

BLAST Search Result

Clone Name	rbart37b09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	A115_TOBAC (P40691) Auxin-induced protein PCNT115	113	3e-25
2	YAKC_SCHPO (Q09923) Aldo-keto reductase yakc [NADP+] (EC 1.1.1.-)	71	2e-12
3	IN22_MAIZE (P49249) IN2-2 protein	66	5e-11
4	YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)	52	8e-07
5	PLR1_SCHPO (O14295) Pyridoxal reductase (EC 1.1.1.65) (PL reduct...	52	1e-06
6	YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)	52	1e-06
7	AAD14_YEAST (P42884) Putative aryl-alcohol dehydrogenase AAD14 (...	49	7e-06
8	STCV_EMENI (Q00727) Putative sterigmatocystin biosynthesis dehyd...	49	1e-05
9	AAD4_YEAST (Q07747) Probable aryl-alcohol dehydrogenase AAD4 (EC...	47	3e-05
10	YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)	46	6e-05
11	YDBC_ECOLI (P25906) Putative oxidoreductase ydbC (EC 1.-.-.-)	46	7e-05
12	AAD16_YEAST (P43546) Putative aryl-alcohol dehydrogenase AAD16 (...	46	7e-05
13	AAD10_YEAST (P47182) Putative aryl-alcohol dehydrogenase AAD10 (...	45	2e-04
14	YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ	38	0.016
15	AAD_PHACH (Q01752) Aryl-alcohol dehydrogenase [NADP+] (EC 1.1.1....	37	0.035
16	Y2320_MYCBO (P63485) Hypothetical protein Mb2320	37	0.045
17	Y2298_MYCTU (P63484) Hypothetical protein Rv2298/MT2355	37	0.045
18	YGHZ_ECOLI (Q46851) Hypothetical protein yghZ	37	0.045
19	AAD3_YEAST (P25612) Putative aryl-alcohol dehydrogenase AAD3 (EC...	37	0.045
20	IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protei...	35	0.10
21	KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subuni...	35	0.13
22	KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subu...	34	0.23
23	KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subu...	34	0.29
24	KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subuni...	33	0.38
25	KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subu...	33	0.38
26	KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subu...	32	0.86
27	KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subu...	32	0.86
28	ALDR_HORVU (P23901) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyd...	32	0.86
29	KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subu...	32	1.1
30	KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subuni...	32	1.5
31	KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subu...	32	1.5
32	KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subu...	32	1.5
33	KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subu...	32	1.5
34	KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subu...	32	1.5
35	KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subu...	32	1.5
36	KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subu...	31	1.9
37	MTFA_PSEF5 (Q4KFD4) Putative RNA 2'-O-ribose methyltransferase m...	31	1.9
38	KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subu...	31	2.5
39	NDRG4_XENTR (Q6DIX1) Protein NDRG4	30	3.3
40	NDR4A_XENLA (Q640Z1) Protein NDRG4-A	30	3.3
41	EX7L_AGRT5 (Q8UIM4) Probable exodeoxyribonuclease VII large subu...	30	4.3
42	NDR4B_XENLA (Q6DJD3) Protein NDRG4-B	30	4.3
43	DPOL_RCMVM (Q85428) DNA polymerase (EC 2.7.7.7)	29	7.3
44	TRPD_COREF (Q8FLJ8) Anthranilate phosphoribosyltransferase (EC 2...	29	7.3
45	GLXK_HAEIN (P44507) Glycerate kinase (EC 2.7.1.31)	29	9.5

>A115_TOBAC (P40691) Auxin-induced protein PCNT115|
          Length = 307

 Score =  113 bits (283), Expect = 3e-25
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = -1

Query: 537 DDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKV 358
           +D+RK LPRFQ ENL+ N  ++ER+ EMA RKGCT SQLALAWVHH+G DVCPIPGTTK+
Sbjct: 235 EDYRKYLPRFQAENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKI 294

Query: 357 ENLNQNVR 334
           ENLNQN++
Sbjct: 295 ENLNQNMK 302

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>YAKC_SCHPO (Q09923) Aldo-keto reductase yakc [NADP+] (EC 1.1.1.-)|
          Length = 340

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 35/95 (36%), Positives = 53/95 (55%)
 Frame = -1

Query: 534 DFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVE 355
           DFR+  PR+Q EN  KN  +  ++ ++A     T  QL+LAW+  +G D+ PIPGT +V+
Sbjct: 229 DFRRKAPRYQKENFYKNLELVTKIEKIATANNITPGQLSLAWLLAQGDDILPIPGTKRVK 288

Query: 354 NLNQNVRAMSVQLMVEEMAELESYAAMDAVQGDRY 250
            L +N  A+ V+L    + E+        V G RY
Sbjct: 289 YLEENFGALKVKLSDATVKEIREACDNAEVIGARY 323

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>IN22_MAIZE (P49249) IN2-2 protein|
          Length = 306

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 27/73 (36%), Positives = 41/73 (56%)
 Frame = -3

Query: 532 FPQESPKISTRELEEERRYIRACERDGGEEGLHVVAARASLGSPPGNRCVPHTWHDQS*E 353
           F +  P+     L++  +      RDG  E +H + AR  LGSPP  R +PHTWH+++ +
Sbjct: 232 FRKHMPRFQPENLDKNAQIFERVRRDGSTERMHAITARVGLGSPPRKRRLPHTWHNKNRQ 291

Query: 352 FEPERESDVCAAH 314
            +PER   VC A+
Sbjct: 292 LQPERGGTVCEAY 304



 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -1

Query: 534 DFRKNLPRFQPENLKKNAAIFERV 463
           DFRK++PRFQPENL KNA IFERV
Sbjct: 231 DFRKHMPRFQPENLDKNAQIFERV 254

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>YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)|
          Length = 324

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 30/84 (35%), Positives = 51/84 (60%)
 Frame = -1

Query: 537 DDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKV 358
           D+  KNL +   EN   +A I ER++ ++   G T +Q+ALAW+  +     PI GT++ 
Sbjct: 233 DEVGKNLYKESDEN---DAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSRE 289

Query: 357 ENLNQNVRAMSVQLMVEEMAELES 286
           E L++ + A+ + L  E++AELE+
Sbjct: 290 EQLDELLNAVDITLKPEQIAELET 313

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>PLR1_SCHPO (O14295) Pyridoxal reductase (EC 1.1.1.65) (PL reductase) (PL-red)|
          Length = 333

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
 Frame = -1

Query: 531 FRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTD-VCPIPGTTKVE 355
           F + L RF P+   KN    + V ++A + G T  + +L ++   G   V PIPG+T V 
Sbjct: 229 FLEYLDRFSPDVFAKNLPFLQAVEQLAKKFGMTMPEFSLLFIMASGNGLVIPIPGSTSVS 288

Query: 354 NLNQNVRAMSVQLMVEEMAELESYAAMDAVQGDRYHSTFLNT 229
               N+ A++  L  E+  E +   +   + G RY+     T
Sbjct: 289 RTKSNLNALNKSLSPEQFKEAKEVLSKYPIYGLRYNEQLAGT 330

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>YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)|
          Length = 310

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%)
 Frame = -1

Query: 537 DDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKV 358
           DDFRK+ P+FQ E    N    +++  +A  K   ++ +ALAW+  R      IPG  + 
Sbjct: 224 DDFRKDKPQFQGETFIHNLKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRP 283

Query: 357 ENLNQNVRAMSVQLMVEEM 301
           E L  N++ ++++L  +E+
Sbjct: 284 EQLQDNLKTLNIELTEDEV 302

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>AAD14_YEAST (P42884) Putative aryl-alcohol dehydrogenase AAD14 (EC 1.1.1.-)|
          Length = 376

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -1

Query: 504 PENLKKNAAIFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAM 328
           PE  +    I E ++++A   G  S + +A+A+V  +  +V P+ G  K+E+L QN+ A+
Sbjct: 266 PEQTELEVKISEALTKIAEEHGTESVTAIAIAYVRSKAKNVFPLIGGRKIEHLKQNIEAL 325

Query: 327 SVQLMVEEMAELESYAAMD 271
           S++L  E++  LES    D
Sbjct: 326 SIKLTPEQIEYLESIVPFD 344

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>STCV_EMENI (Q00727) Putative sterigmatocystin biosynthesis dehydrogenase stcV|
           (EC 1.1.1.-)
          Length = 387

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 25/89 (28%), Positives = 49/89 (55%)
 Frame = -1

Query: 537 DDFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKV 358
           ++F++   R      +K+  +  +++E+  RKG  ++ +ALA++ H+   V P+ G   V
Sbjct: 244 EEFQQEGTRNMGPQEEKHRLMGAKLTEVGERKGVAAAAIALAYLLHKSPYVFPVIGCRTV 303

Query: 357 ENLNQNVRAMSVQLMVEEMAELESYAAMD 271
           E L  N+ ++ V+L  EE+ E+E     D
Sbjct: 304 EQLEANITSLGVELSDEEIYEIEDTIPFD 332

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>AAD4_YEAST (Q07747) Probable aryl-alcohol dehydrogenase AAD4 (EC 1.1.1.-)|
          Length = 329

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -1

Query: 489 KNAAIFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLM 313
           K   I E ++++A   G  S + +A+A+V  +  +V P+ G  K+E+L QN+ A+S++L 
Sbjct: 225 KEVKISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVGGRKIEHLKQNIEALSIKLT 284

Query: 312 VEEMAELESYAAMD 271
            E++  LES    D
Sbjct: 285 PEQIEYLESIIPFD 298

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>YDJG_ECOLI (P77256) Hypothetical oxidoreductase ydjG (EC 1.-.-.-)|
          Length = 326

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
 Frame = -1

Query: 528 RKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENL 349
           R N   FQ EN+ K   + E+   + AR  CT   LALAW+  +   +  + G T  E +
Sbjct: 239 RANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQV 298

Query: 348 NQNVRAMSVQL------MVEEMAE 295
            +NV A+++ L      ++ EMAE
Sbjct: 299 RENVAALNINLSDADATLMREMAE 322

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>YDBC_ECOLI (P25906) Putative oxidoreductase ydbC (EC 1.-.-.-)|
          Length = 286

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 22/59 (37%), Positives = 37/59 (62%)
 Frame = -1

Query: 465 VSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEMAELE 289
           +S++AA  G T  Q+ALAW+  R  ++  IPGT+ V +L +N+ A  + L  E ++ L+
Sbjct: 223 LSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLD 281

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>AAD16_YEAST (P43546) Putative aryl-alcohol dehydrogenase AAD16 (EC 1.1.1.-)|
          Length = 152

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -1

Query: 477 IFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEM 301
           I E ++++A   G  S + +A+A+V  +  +V P+ G  K+E+L QN+ A+S++L  E++
Sbjct: 52  ISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVGGRKIEHLKQNIEALSIKLTPEQI 111

Query: 300 AELESYAAMD 271
             LES    D
Sbjct: 112 KYLESIIPFD 121

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>AAD10_YEAST (P47182) Putative aryl-alcohol dehydrogenase AAD10 (EC 1.1.1.-)|
          Length = 288

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMS 325
           E       I E + ++A   G  S + +A+A+V  +   V P+ G  K+E+L QN+ A+S
Sbjct: 179 EQTDMEVKISEALLKVAEEHGTESVTAIAIAYVRSKAKHVFPLVGGRKIEHLKQNIEALS 238

Query: 324 VQLMVEEMAELESYAAMD 271
           ++L  E++  LES    D
Sbjct: 239 IKLTPEQIKYLESIVPFD 256

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>YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ|
          Length = 346

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -1

Query: 465 VSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAM-SVQLMVEEMAELE 289
           ++EMA ++G + +Q+AL+W+         + G ++ E L +NV+A+ ++    EE+A+++
Sbjct: 270 LNEMAQQRGQSMAQMALSWLLKDERVTSVLVGASRAEQLEENVQALNNLTFSTEELAQID 329

Query: 288 SYAA 277
            + A
Sbjct: 330 QHIA 333

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>AAD_PHACH (Q01752) Aryl-alcohol dehydrogenase [NADP+] (EC 1.1.1.91) (AAD)|
          Length = 385

 Score = 37.0 bits (84), Expect = 0.035
 Identities = 23/67 (34%), Positives = 37/67 (55%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           E  +K +   E+V+E    K  TS  +A+A++  +   V PI G  KVE+L  N+ A+ +
Sbjct: 274 ETERKVSKALEKVAEEIGAKSITS--VAIAYLMQKFPYVFPIVGGRKVEHLYANLEALDI 331

Query: 321 QLMVEEM 301
            L  E+M
Sbjct: 332 SLSPEQM 338

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>Y2320_MYCBO (P63485) Hypothetical protein Mb2320|
          Length = 323

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = -1

Query: 516 PRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNV 337
           P F  ENL++   +   +  +A       +Q+ALAW+      V  IPG + VE L  NV
Sbjct: 223 PLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISL-PGVVAIPGASSVEQLEFNV 281

Query: 336 RAMSVQLMVEEMAELESYA 280
            A  ++L  +    L   A
Sbjct: 282 AAADIELSAQSRDALTDAA 300

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>Y2298_MYCTU (P63484) Hypothetical protein Rv2298/MT2355|
          Length = 323

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = -1

Query: 516 PRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNV 337
           P F  ENL++   +   +  +A       +Q+ALAW+      V  IPG + VE L  NV
Sbjct: 223 PLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISL-PGVVAIPGASSVEQLEFNV 281

Query: 336 RAMSVQLMVEEMAELESYA 280
            A  ++L  +    L   A
Sbjct: 282 AAADIELSAQSRDALTDAA 300

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>YGHZ_ECOLI (Q46851) Hypothetical protein yghZ|
          Length = 346

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 17/64 (26%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -1

Query: 465 VSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAM-SVQLMVEEMAELE 289
           ++EMA ++G + +Q+AL+W+         + G ++ E L +NV+A+ ++    +E+A+++
Sbjct: 270 LNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQID 329

Query: 288 SYAA 277
            + A
Sbjct: 330 QHIA 333

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>AAD3_YEAST (P25612) Putative aryl-alcohol dehydrogenase AAD3 (EC 1.1.1.-)|
          Length = 363

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 477 IFERVSEMAARKGCTS-SQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEM 301
           I E ++++A   G  S + +A+A+V  +  +  P     K+E+L +N++A+S+ L  + +
Sbjct: 272 ISEALAKIAEEHGTESVTAIAIAYVRSKAKNFFPSVEGGKIEDLKENIKALSIDLTPDNI 331

Query: 300 AELESYAAMD 271
             LES    D
Sbjct: 332 KYLESIVPFD 341

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>IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protein 147)|
           (VEG147) (AKR11A)
          Length = 310

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 20/86 (23%), Positives = 37/86 (43%)
 Frame = -1

Query: 534 DFRKNLPRFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVE 355
           D R     F+ E  K+N     +++ +A +       + LAW   R      IPG  + +
Sbjct: 225 DLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRAD 284

Query: 354 NLNQNVRAMSVQLMVEEMAELESYAA 277
            L  N++   V L  E+++ ++   A
Sbjct: 285 QLIDNIKTADVTLSQEDISFIDKLFA 310

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>KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3) (RCK beta3)
          Length = 404

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 24/90 (26%), Positives = 44/90 (48%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           + Q E+ KK  A    +  +A + GCT +QLA+AW          + G +  E L +++ 
Sbjct: 317 KVQSEDGKKQQARVTDLLPIAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLG 376

Query: 333 AMSVQLMVEEMAELESYAAMDAVQGDRYHS 244
           ++ V   +     +E    +DA+ G++ HS
Sbjct: 377 SLQVLGQLTPQTVME----IDALLGNKSHS 402

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>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 404

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 24/90 (26%), Positives = 43/90 (47%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           + Q E+ KK  A    +  +A + GCT +QLA+AW          + G +  E L +++ 
Sbjct: 317 KVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHLG 376

Query: 333 AMSVQLMVEEMAELESYAAMDAVQGDRYHS 244
           A+ V   +     +E    +D + G++ HS
Sbjct: 377 ALQVLSQLTPQTVME----IDGLLGNKPHS 402

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>KCAB3_MOUSE (P97382) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 249

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 24/90 (26%), Positives = 41/90 (45%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           + Q E  KK  A    +   A + GCT  QLA+AW          + G +  E L +++ 
Sbjct: 162 KVQSEEGKKQQARVMDLLPTARQLGCTVGQLAIAWCLRSEGVSSVLLGVSSAEQLMEHLG 221

Query: 333 AMSVQLMVEEMAELESYAAMDAVQGDRYHS 244
           ++ V   +     +E    +DA+ G++ HS
Sbjct: 222 SLQVLSQLTPQTVVE----IDALLGNKSHS 247

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>KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  E L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQV 339

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>KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (Neuroimmune protein
           F5)
          Length = 367

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  E L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQV 339

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>KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2) (HKvbeta2)
          Length = 367

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  + L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQV 339

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>KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           E  ++  A  + +  +A R GCT  QLA+AW          + G +  + L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASSADQLMENIGAIQV 339

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>ALDR_HORVU (P23901) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase)|
          Length = 320

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = -1

Query: 492 KKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSVQLM 313
           +KN A    V ++A +   T  Q+ + W   RGT V  IP ++K E + +N++    ++ 
Sbjct: 221 EKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSV--IPKSSKDERIKENIQVFGWEIP 278

Query: 312 VEEMAEL 292
            E+   L
Sbjct: 279 EEDFKVL 285

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>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ A+ V
Sbjct: 314 EEGRKQQTKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQLIENLGAIQV 373

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>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 310 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 369

Query: 333 AMSV 322
           A+ V
Sbjct: 370 AIQV 373

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>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 328 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 387

Query: 333 AMSV 322
           A+ V
Sbjct: 388 AIQV 391

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>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 310 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 369

Query: 333 AMSV 322
           A+ V
Sbjct: 370 AIQV 373

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>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 328 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 387

Query: 333 AMSV 322
           A+ V
Sbjct: 388 AIQV 391

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>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 310 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 369

Query: 333 AMSV 322
           A+ V
Sbjct: 370 AIQV 373

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>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 408

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -1

Query: 513 RFQPENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVR 334
           R   E  +K     + +S +A R GCT  QLA+AW          + G++  E L +N+ 
Sbjct: 317 RIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLG 376

Query: 333 AMSV 322
           A+ V
Sbjct: 377 AIQV 380

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>KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subunit (K(+)|
           channel beta-2 subunit) (Kv-beta-2)
          Length = 367

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -1

Query: 501 ENLKKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           E  ++  A  +    +A R GCT  QLA+AW          + G +  + L +N+ A+ V
Sbjct: 280 EEGRRQQAKLKEFQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLLENIGAIQV 339

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>MTFA_PSEF5 (Q4KFD4) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 357

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -3

Query: 535 RFPQESPKISTRELEEERRYIRACERDGGEEGLHVVAARASLGSPPG 395
           +FP+E+P  ST +LEE   +     RD  +E LH       LG+ PG
Sbjct: 174 KFPREAPSRSTLKLEEAWHHF--IPRDQWDERLHGDMTGVDLGAAPG 218

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>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 401

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -1

Query: 492 KKNAAIFERVSEMAARKGCTSSQLALAWVHHRGTDVCPIPGTTKVENLNQNVRAMSV 322
           KK  +  + +  +A R  CT +QLA+AW          + G + +E L +N+ A+ V
Sbjct: 317 KKQHSKVKELHPIADRLNCTVTQLAIAWCLRSEGVSSVLLGVSNIEQLLENLGAIQV 373

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>NDRG4_XENTR (Q6DIX1) Protein NDRG4|
          Length = 405

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -3

Query: 535 RFPQESPKISTR--ELEEERRYIRACERDGGEEG-------LHVVAARASLGSPPGNRCV 383
           RFP+E P +  +  E+E    ++ A + D  E         LHVV      G+P GNR  
Sbjct: 28  RFPEEKPLLRGQDTEMESADTFLSAADTDWKEHDIETPYGMLHVVIR----GTPKGNRPA 83

Query: 382 PHTWHD 365
             T+HD
Sbjct: 84  ILTYHD 89

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>NDR4A_XENLA (Q640Z1) Protein NDRG4-A|
          Length = 390

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -3

Query: 535 RFPQESPKISTR--ELEEERRYIRACERDGGEEG-------LHVVAARASLGSPPGNRCV 383
           RFP+E P +  +  E+E    ++ A + D  E         LHVV      G+P GNR  
Sbjct: 28  RFPEEKPLLRGQDTEMESADTFLSAADTDWKEHDIETPYGMLHVVIR----GTPKGNRPA 83

Query: 382 PHTWHD 365
             T+HD
Sbjct: 84  ILTYHD 89

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>EX7L_AGRT5 (Q8UIM4) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 532

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 138 DTKHQHSDRFP*YPVKWLSRMRGEGS 215
           D  H+ SDRFP + V W  +++GEGS
Sbjct: 162 DILHRISDRFPVHVVVWPVKVQGEGS 187

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>NDR4B_XENLA (Q6DJD3) Protein NDRG4-B|
          Length = 367

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -3

Query: 535 RFPQESPKISTR--ELEEERRYIRACERDGGEEG-------LHVVAARASLGSPPGNRCV 383
           RFP+E P +  +  E+E    ++ A + D  E         LHVV      G+P GNR  
Sbjct: 5   RFPEEKPLLRGQDTEMESADTFMSAADTDWKEHDIETPYGMLHVVIR----GTPKGNRPA 60

Query: 382 PHTWHD 365
             T+HD
Sbjct: 61  ILTYHD 66

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>DPOL_RCMVM (Q85428) DNA polymerase (EC 2.7.7.7)|
          Length = 1173

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 178 GYHGNRSLC*CFVSLV*SICKSNNF-MSTLCMDGIMEPPI 62
           GYH N  L   F SL  SI  SNN   STL +DG   PP+
Sbjct: 640 GYHHNPILVFDFASLYPSIIMSNNLCYSTLLVDG--SPPV 677

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>TRPD_COREF (Q8FLJ8) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 342

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -1

Query: 408 VHHRGTDVCPIPGTTKVENLNQNVRAMSVQLMVEEMAELESYAAMDAVQGD 256
           VH  GTD   + GTT+V  L  +   +S ++  EE+  +E     D V GD
Sbjct: 222 VHGAGTDEIAVHGTTQVWELKADGEIISYEITPEELG-VERCDLTDLVGGD 271

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>GLXK_HAEIN (P44507) Glycerate kinase (EC 2.7.1.31)|
          Length = 378

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 184 SGFPG*EGRGLGVLPGVEERAVVPIALDRIH 276
           +G  G  G GL +LP V+ +A + I LDR+H
Sbjct: 247 AGAAGGMGGGLLLLPSVQLKAGIQIVLDRLH 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,921,235
Number of Sequences: 219361
Number of extensions: 1559671
Number of successful extensions: 4756
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4754
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result