>dbj|AB161683.1| Triticum aestivum WCSP3 mRNA for cold shock domain protein 3,
           complete cds
          Length = 1025

 Score = 69.9 bits (35), Expect = 7e-10
 Identities = 54/59 (91%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                      
Query: 1   agagacacaacaaaataacttggatctttaacggacaaaccaccagcaattcttctgga 59
           ||||| ||| |||||||||||||||||| |||| ||| |||||||||||||||||||||
Sbjct: 943 agagagacagcaaaataacttggatctt-aacgaacacaccaccagcaattcttctgga 886

>dbj|AB066265.2| Triticum aestivum WCSP1 mRNA for cold shock protein-1, complete cds
          Length = 1029

 Score = 67.9 bits (34), Expect = 3e-09
 Identities = 55/61 (90%), Gaps = 2/61 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagacacaacaaaataacttggatcttta--acggacaaaccaccagcaattcttctgg 58
           ||||| |||||||||||||||||||||| |  ||| ||| ||||||||||||||||||||
Sbjct: 958 agagagacaacaaaataacttggatcttaacgacgaacacaccaccagcaattcttctgg 899

            
Query: 59  a 59
           |
Sbjct: 898 a 898

>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 0.65
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     aaaataacttggatctttaa 31
              ||||||||||||||||||||
Sbjct: 367400 aaaataacttggatctttaa 367381

>ref|NM_133997.1| Mus musculus apolipoprotein F (Apof), mRNA
          Length = 1931

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 3   agacacaacaaaataacttggat 25
           ||||||||||||||||| |||||
Sbjct: 367 agacacaacaaaataacatggat 389

>gb|AC165361.3| Mus musculus BAC clone RP23-77H6 from chromosome 17, complete sequence
          Length = 228753

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     ccagcaattcttctggatc 61
              |||||||||||||||||||
Sbjct: 204282 ccagcaattcttctggatc 204264

>ref|XM_545225.2| PREDICTED: Canis familiaris similar to 5-hydroxytryptamine receptor
           3 subunit C (LOC488101), mRNA
          Length = 1674

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 49  attcttctggatcccagct 67
           |||||||||||||||||||
Sbjct: 649 attcttctggatcccagct 631

>gb|AC124434.3| Mus musculus BAC clone RP24-250K22 from chromosome 8, complete sequence
          Length = 167741

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      acaacaaaataacttggat 25
              |||||||||||||||||||
Sbjct: 118280 acaacaaaataacttggat 118298

>gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome 17, complete sequence
          Length = 197213

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     ccagcaattcttctggatc 61
              |||||||||||||||||||
Sbjct: 114131 ccagcaattcttctggatc 114113

>emb|AL391194.13| Human DNA sequence from clone RP11-352G14 on chromosome 6 Contains the
             SLC17A4 gene for solute carrier family 17 (sodium
             phosphate) member 4 and the 3' end of the SLC17A1 gene for
             solute carrier family 17 (sodium phosphate) member 1,
             complete sequence
          Length = 48243

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     acacaacaaaataacttgg 23
             |||||||||||||||||||
Sbjct: 20676 acacaacaaaataacttgg 20658

>emb|AL160171.27| Human DNA sequence from clone RP11-256E16 on chromosome 1 Contains a
             novel gene, a novel gene (FLJ30525), the 5' end of a novel
             gene (FLJ10330) and a CpG island, complete sequence
          Length = 161273

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    accagcaattcttctggat 60
             |||||||||||||||||||
Sbjct: 36574 accagcaattcttctggat 36592

>gb|AC090489.8| Genomic sequence for Mus musculus, clone RP23-104O10, complete sequence
          Length = 207424

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 3     agacacaacaaaataacttggat 25
             ||||||||||||||||| |||||
Sbjct: 18087 agacacaacaaaataacatggat 18109

>gb|AF411831.1|AF411831 Mus musculus strain NFS apolipoprotein F (Apof) gene, complete cds
          Length = 2340

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 3   agacacaacaaaataacttggat 25
           ||||||||||||||||| |||||
Sbjct: 367 agacacaacaaaataacatggat 389

>gb|AF411830.1|AF411830 Mus musculus strain CAST/Ei apolipoprotein F (Apof) gene, complete
           cds
          Length = 2274

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 3   agacacaacaaaataacttggat 25
           ||||||||||||||||| |||||
Sbjct: 344 agacacaacaaaataacatggat 366

>gb|AC154332.2| Mus musculus BAC clone RP23-259P17 from chromosome 14, complete
             sequence
          Length = 208155

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    gacaaaccaccagcaattcttct 56
             |||| ||||||||||||||||||
Sbjct: 62506 gacacaccaccagcaattcttct 62484

>gb|AC091326.8| Mus musculus chromosome 8, clone RP23-135P2, complete sequence
          Length = 180929

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     acaacaaaataacttggat 25
             |||||||||||||||||||
Sbjct: 22972 acaacaaaataacttggat 22990

>emb|AL935209.14| Zebrafish DNA sequence from clone DKEY-61N16, complete sequence
          Length = 162012

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 11    caaaataacttggatctttaacg 33
             ||||||||||||||| |||||||
Sbjct: 17819 caaaataacttggatgtttaacg 17797

>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence
          Length = 182809

 Score = 38.2 bits (19), Expect = 2.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     agacacaacaaaataacttggat 25
             ||||||||||||||||| |||||
Sbjct: 39114 agacacaacaaaataacatggat 39092


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 747,624
Number of Sequences: 3902068
Number of extensions: 747624
Number of successful extensions: 74728
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74696
Number of HSP's gapped (non-prelim): 30
length of query: 67
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 46
effective length of database: 17,151,101,840
effective search space: 788950684640
effective search space used: 788950684640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)