>ARFP_ARATH (Q93YR9) Auxin response factor 16|
          Length = 670

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = -1

Query: 479 YRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSV 366
           YRDA+GA+K+ G+EPFS+F KTARRLTILT+   +S V
Sbjct: 632 YRDASGAIKYAGNEPFSEFLKTARRLTILTEQGSESVV 669

>ARFJ_ARATH (Q9SKN5) Auxin response factor 10|
          Length = 693

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = -1

Query: 479 YRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDS 372
           YRDA G +K  GDEPFSDF K  +RLTI  D  GD+
Sbjct: 629 YRDANGVIKRIGDEPFSDFMKATKRLTIKMDIGGDN 664

>DYIN_DICDI (P54703) Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic|
           dynein intermediate chain)
          Length = 652

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 153 GTSLIIGEKLKLPAPVVLLDLHPGRGGSPF 242
           G  +++ E+ K   P+  +DLHP +GG+ F
Sbjct: 478 GNRIVMNERYKELGPITSVDLHPSKGGADF 507

>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein|
          Length = 442

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
 Frame = -2

Query: 322 VRATAGRGAAPHGGG-------SQRA*IEWRQTPNGEPPRPGCKSRSTTGAGSFSFSPI- 167
           +    G+GA P GGG       S R     R  P G   R  C+    TG        + 
Sbjct: 159 IEVVVGQGAKPGGGGMLLGQKISDRV-ANMRNLPKGIDQRSACRHPDWTGPDDLEIKILE 217

Query: 166 IREVPEWDG*LFV 128
           +RE+ +W+  ++V
Sbjct: 218 LREITDWEKPIYV 230

>IAA16_ORYSA (P0C127) Auxin-responsive protein IAA16 (Indoleacetic acid-induced|
           protein 16)
          Length = 228

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -1

Query: 479 YRDAAGALKHTGDEPFSDFTKTARRLTILTDTSGDSSVAS*GVRKEASS 333
           Y D  G     GD P++ F   ARRL +L  +  ++S    G RK A++
Sbjct: 179 YEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSDLNASTIRAGSRKRAAA 227

>STK31_HUMAN (Q9BXU1) Serine/threonine-protein kinase 31 (EC 2.7.11.1)|
           (Serine/threonine-protein kinase NYD-SPK)
          Length = 1019

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 71  IIIMGTSQHNERKKSVQGSHKQSSVPFWDLSNNRRK 178
           I+ M    H ++ + V GSH + +V FW  S NR K
Sbjct: 21  IVQMDEDTHYDKVEDVVGSHIEDAVTFWAQSINRNK 56

>UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 10)
           (Ubiquitin-specific-processing protease 10)
           (Deubiquitinating enzyme 10) (Disrupter of telomere
           silencing protein 4)
          Length = 792

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 44  IPSLRYYYYIIIMGTSQHNERKKSVQGSHKQSSVPFW-DLSNNRRKTEAA 190
           IPS+++Y + I+MG       K SV  +  ++S   W  +S N RK  +A
Sbjct: 383 IPSIQHYLFDILMGKYDSTISKNSVSYTLAETSKKMWLPVSKNPRKNVSA 432

>Y489_MYCPN (P75296) Hypothetical lipoprotein MG338 homolog precursor|
           (P02_orf1300)
          Length = 1300

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +2

Query: 2   IHSSQEFQQGEPPWIPSLRYYYYIIIMGTSQHNERKKSVQGSHKQSSVPFWDLSNNRRKT 181
           + S   FQ      + +  Y   + +MG+ Q  + K SVQGS + +SV       NR+++
Sbjct: 575 LESGSLFQTWAQTGLTAKLYGALVAMMGSGQGTQVKGSVQGSSRAASVSVQTTQQNRQQS 634

>IAA12_ORYSA (Q75GK1) Auxin-responsive protein IAA12 (Indoleacetic acid-induced|
           protein 12)
          Length = 226

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 479 YRDAAGALKHTGDEPFSDFTKTARRLTIL 393
           Y+D  G L   GD PF  FT T ++L I+
Sbjct: 182 YQDKDGDLMLVGDVPFDMFTSTCKKLRIM 210

>TEN3_TENMO (Q27270) Tenecin-3 precursor|
          Length = 96

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 423 HEDGA*ADDTNGHERRQQRSELGGEEGSKLFRH 325
           H DG       GH+  QQ   LGG++G  L  H
Sbjct: 20  HHDGHLGGHQTGHQGGQQGGHLGGQQGGHLGGH 52

>IAA34_ARATH (Q9C5X0) Auxin-responsive protein IAA34 (Indoleacetic acid-induced|
           protein 34)
          Length = 185

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 479 YRDAAGALKHTGDEPFSDFTKTARRLTI 396
           YRD  G  ++ GD P+++F ++  RL I
Sbjct: 148 YRDEEGLWRNAGDVPWNEFIESVERLRI 175

>FREM3_HUMAN (P0C091) FRAS1-related extracellular matrix protein 3 precursor|
          Length = 2135

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -3

Query: 354  GEEGSKLFRHLYVLQLGGAQRRTVAVLRERR*SGGKPRMASPRGLDASQEAPPVQAASV 178
            GE+ S   +HL+V  +   Q   +  +  +  SG   ++AS  G   SQ   P+ A S+
Sbjct: 1082 GEKNSLTLQHLHVEDVDTHQDELLCTVTSQPASGYLEKIASAPGSKMSQSGSPISAFSL 1140


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,406,747
Number of Sequences: 219361
Number of extensions: 1593214
Number of successful extensions: 5288
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5279
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)