ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart37a08 |
|---|---|
| Clone Library Name | barley_pub |
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +3 Query: 372 ANTVVDAVIAHTPEP--SLAGPPRRTKPLAPHDDRAKP*PLHL 494 A ++ + +AHTP P + A P R PL+ H ++ P LHL Sbjct: 1276 AGSIPLSPLAHTPSPPATAASPQRSPSPLSGHGSQSFPTKLHL 1318
>EFG2_STRCO (O87844) Elongation factor G 2 (EF-G 2)| Length = 686 Score = 30.0 bits (66), Expect = 4.0 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +3 Query: 297 RRLHRSG-GLPALCYSIIRGTHHHHGANTVVDAVIAHTPEPSLAGPPRRTKPLAPHDDRA 473 R L R+G G+ LC S R + G ++DAV+A+ P P P R T A + A Sbjct: 243 RDLTRTGDGVVVLCGSAYR----NRGVEPLLDAVVAYLPSPLDVPPVRGTHDGAERERPA 298 Query: 474 KP 479 P Sbjct: 299 DP 300
>RM40_MOUSE (Q9Z2Q5) 39S ribosomal protein L40, mitochondrial precursor (L40mt)| (MRP-40) (Nuclear localization signal-containing protein deleted in velocardiofacial syndrome homolog) Length = 206 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/64 (28%), Positives = 26/64 (40%) Frame = +3 Query: 282 VLCTNRRLHRSGGLPALCYSIIRGTHHHHGANTVVDAVIAHTPEPSLAGPPRRTKPLAPH 461 +LC R L +P C + +R TH D + P A P R+ K + P Sbjct: 6 MLCAARALRPRSWIPGTCQAHVRHTHQRASLLAFWDLI------PMRAEPLRKKKKVDPR 59 Query: 462 DDRA 473 D+A Sbjct: 60 KDQA 63
>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1798 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 372 ANTVVDAVIAHTPEPS--LAGPPRRTKPLAPHDDRAKP*PLHL 494 A ++ + +AHTP P A P R PL+ H +A P LHL Sbjct: 1338 AGSIPLSPLAHTPSPPPPTASPQRSPSPLSGHVAQAFPTKLHL 1380
>ANXA7_XENLA (Q92125) Annexin A7 (Annexin VII) (Synexin)| Length = 512 Score = 29.6 bits (65), Expect = 5.3 Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Frame = +2 Query: 206 DPIKYPYAPQRRHGTRHPPLAQGGARPLHXXXXXXXXXXXXXLLQHHQGYAPPPRGKY-- 379 DP P A Q G + PP A GGA P G APPP G Y Sbjct: 19 DPSYPPAAQQAFPGGQFPPAAGGGAFPPASGG----------------GNAPPPGGGYPH 62 Query: 380 -SGGRSNRSHSRAFPCWPAAP 439 G + + P +P AP Sbjct: 63 AGGYPAPGGYPGGMPSYPGAP 83
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 7/49 (14%) Frame = +3 Query: 333 CY-SIIRGTHHHH------GANTVVDAVIAHTPEPSLAGPPRRTKPLAP 458 CY SI RG HH G + V P P L PP T PL P Sbjct: 528 CYRSINRGRHHSERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPP 576
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 29.3 bits (64), Expect = 6.9 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +3 Query: 369 GANTVVDAVIAHTPEPSLAGPPRRTKPLA-PHDDRAKP 479 GA T + +A P P GPPR ++PL P DD +P Sbjct: 289 GATTSPNPSLAIEPPPPSHGPPRPSEPLPDPGDDADEP 326
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 7/49 (14%) Frame = +3 Query: 333 CY-SIIRGTHHHH------GANTVVDAVIAHTPEPSLAGPPRRTKPLAP 458 CY SI RG HH G + V P P L PP T PL P Sbjct: 529 CYRSINRGRHHSERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPP 577
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 28.9 bits (63), Expect = 9.0 Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Frame = +2 Query: 221 PYAPQR-RHGTRHPPLAQGGARPLHXXXXXXXXXXXXXLLQHHQGYAPPPRGKY----SG 385 P+ P T HPP++ H QHH PPP G + G Sbjct: 460 PFPPSTGAQSTAHPPVSTHHHH--HQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 517 Query: 386 GRSNRSHSRAFPCWPAAPHQTPCSP**PR*ALASPPRGRVSPS 514 G S+ +H A +P P P A PP +VS S Sbjct: 518 GSSHHAHPYAM-----SPSLGSLRPYPPGPAHLPPPHSQVSYS 555
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 28.9 bits (63), Expect = 9.0 Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Frame = +2 Query: 221 PYAPQR-RHGTRHPPLAQGGARPLHXXXXXXXXXXXXXLLQHHQGYAPPPRGKY----SG 385 P+ P T HPP++ H QHH PPP G + G Sbjct: 461 PFPPSTGAQSTAHPPVSTHH----HHHQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 516 Query: 386 GRSNRSHSRAFPCWPAAPHQTPCSP**PR*ALASPPRGRVSPS 514 G S+ +H A +P P P A PP +VS S Sbjct: 517 GSSHHAHPYAM-----SPSLGSLRPYPPGPAHLPPPHSQVSYS 554 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,219,951 Number of Sequences: 219361 Number of extensions: 1349646 Number of successful extensions: 4266 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4256 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
