>ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335|
          Length = 1342

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 235  YPLVPCAAMPRP*CHEWPPSPLANRCSGFSRAHPTMPSAAA 357
            +PL+ C  +PR      PPSP    C G S++  + P A +
Sbjct: 959  WPLLQCGGLPRD--GPEPPSPAKTHCVGDSQSSASSPPATS 997

>SETBP_MOUSE (Q9Z180) SET-binding protein (SEB)|
          Length = 1535

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +1

Query: 229  PPYPLVPCAAMPRP*CHEWPPSPLANRCSGFSRAHPTMPSAAAAK 363
            PP P  P   +P P     PP PL     G  R H   P A  A+
Sbjct: 1462 PPLPPPPPPPLPPPPPPPPPPPPLPKTARGGKRKHRPQPPAQPAQ 1506

>POF21_ARATH (Q04088) Probable transcription factor PosF21 (AtbZIP59)|
          Length = 398

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 238 PLVPCAAMPRP*CHEWPPSPLANRCSGFSRAHP 336
           P  PC  +P       PPSP + RCS FS A P
Sbjct: 7   PAPPCGGLP-------PPSP-SGRCSAFSEAGP 31

>KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)|
          Length = 1826

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 229  PPYPLVPCAAMPRP*CHEWPPSPLANRCSGF 321
            PP  +   A  P P   + PPSPL+   SG+
Sbjct: 1538 PPPVIAVTAVTPAPEAQDGPPSPLSEASSGY 1568

>PALH_NEUCR (Q7RY98) pH-response regulator protein palH/rim-21|
          Length = 778

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 200 RLRPCMDPSSLPTLWSPAPPCRG 268
           + RP +D ++LP    PAPP RG
Sbjct: 627 KFRPTLDTNNLPVTVIPAPPRRG 649

>CD3H_MOUSE (P29020) T-cell surface glycoprotein CD3 eta chain precursor|
           (T-cell receptor T3 eta chain)
          Length = 206

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 212 CMDPSSLPTLWSPAPP 259
           C    S+PTLWSP PP
Sbjct: 185 CASVFSIPTLWSPWPP 200

>TYPH_MOUSE (Q99N42) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase) (TP)|
          Length = 471

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = -2

Query: 362 LAAAAEGIVGCARLNPLQRFARGLGGHSWHYGRGMAAQ 249
           L A A+GIV C R  PL R    LG      GR  A Q
Sbjct: 367 LLAPADGIVECVRALPLARVLHDLGA-----GRSRAGQ 399

>KCNH4_HUMAN (Q9UQ05) Potassium voltage-gated channel subfamily H member 4|
            (Voltage-gated potassium channel subunit Kv12.3)
            (Ether-a-go-go-like potassium channel 1) (ELK channel 1)
            (ELK1) (Brain-specific eag-like channel 2) (BEC2)
          Length = 1017

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 220  SLIPPYPLVPCAAMPRP*CHEWPPSPLANRCSGFSRA 330
            S++PPYP  P    P P     PP+P   R S  SR+
Sbjct: 977  SILPPYPSEPDPLGPSPVPEASPPTPSLLRHSFQSRS 1013


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,355,192
Number of Sequences: 219361
Number of extensions: 761623
Number of successful extensions: 1841
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)