Clone Name | rbart36h07 |
---|---|
Clone Library Name | barley_pub |
>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)| (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase class VI type 11C) Length = 1132 Score = 30.8 bits (68), Expect = 1.6 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -2 Query: 159 YFFFLRIPRYITTWVYVLLCLFISLFARV 73 YF F ++ ++TW+ ++L +FISLF + Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085
>VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprotein G2;| Nonstructural protein NS-M; Glycoprotein G1] Length = 1441 Score = 30.4 bits (67), Expect = 2.1 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 8/50 (16%) Frame = -2 Query: 165 ISYFFFLRIPRYITTWVYVLLCLFISL--------FARVGRLYEQQCDVF 40 I++++F+ I Y TW +++ L I L F+ + +Y ++CD++ Sbjct: 354 INFYYFVCIMNYAVTWGLIIIGLLIGLLFKKYQHRFSNLYAMYCEECDMY 403
>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)| (Fragment) Length = 347 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -2 Query: 159 YFFFLRIPRYITTWVYVLLCLFISLFARV 73 YF F ++ ++TW+ ++L +FISLF + Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313
>Y148_MYCGE (P47394) Hypothetical protein MG148| Length = 409 Score = 29.6 bits (65), Expect = 3.5 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Frame = +1 Query: 22 KTKLLEKHITLLLV*SPDPRK*TNK*TKQYINPSGNVTWNTKEKKVGNGRALHVT---HH 192 KT L +K LLL + + K + YIN + KE ++ N + L + Sbjct: 78 KTMLNDKEQALLLKTKLELQNQFQKQIENYINEINKLKLTNKELEITNQKQLESSLKLQR 137 Query: 193 TQYREQINQSN*TTKSTRRRPAVRTSI 273 ++ E+INQ N T + + + A R+SI Sbjct: 138 NEFEEKINQQNLTIEKLKIQQA-RSSI 163
>AZR1_YEAST (P50080) Azole resistance protein 1| Length = 613 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = -3 Query: 140 FHVTLPLGFMYCFVYLLVYLRGSGDY--TSSNVMCFSNNFVLLCRSI 6 F+V LP+G + F++L Y G + T N+ F + F+ + R++ Sbjct: 224 FYVNLPIGGLAFFLFLFFYNPGLSTFQETMDNIRKFPSQFIEIVRNV 270
>NU5M_ANOGA (P34854) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 580 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -3 Query: 158 TFFSFVFHVTLPLGFMYCFVYLLVYLRGSGDYTSSNVMCFSNNFVLLCRSIC 3 +FF F F G C+ + LVY +GD+ SS++ +++ + SIC Sbjct: 381 SFFLFFFST----GLTVCYSFRLVYYSMTGDFNSSSLHPLNDSGWTMLFSIC 428 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,535,703 Number of Sequences: 219361 Number of extensions: 920318 Number of successful extensions: 2069 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2069 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)