>DAPD_WOLPM (Q73H59) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate|
           N-succinyltransferase (EC 2.3.1.117)
           (Tetrahydrodipicolinate N-succinyltransferase) (THP
           succinyltransferase) (Tetrahydropicolinate succinylase)
          Length = 276

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 129 GILRGRQQSKSGNIWEKNEVLNQID*HRVSFYSIRTFLELMDLNLHISSKKSSAGSW 299
           G+   + QS+  +IW+  E  N  +  + +  +I+  +EL+D      ++K S+G W
Sbjct: 3   GLQLKKTQSEIKDIWKNREKFNDCNLKKTARIAIKEVIELLDSGKIRVAEKLSSGEW 59

>Y1468_METJA (Q58863) Hypothetical protein MJ1468|
          Length = 1009

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 133 SSGDDNNQNQGIYGKKMKSSIKLTDT 210
           SSGDDNN N   Y    K + K+ DT
Sbjct: 288 SSGDDNNNNGNAYTDPYKITYKVNDT 313

>TRME_LEPIN (P97043) Probable tRNA modification GTPase trmE|
          Length = 456

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 283 DFFEEICKFKSINSRKVRIE*KETLCQSI*LRTSFFSHIFPDF 155
           DF  E   ++S+  RK RIE  ++LCQ++  ++S    +   F
Sbjct: 179 DFSTEDLTYESLEERKTRIENVKSLCQTLISKSSSAEKLIQQF 221

>TRME_LEPIC (Q72VY6) tRNA modification GTPase trmE|
          Length = 456

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 283 DFFEEICKFKSINSRKVRIE*KETLCQSI*LRTSFFSHIFPDF 155
           DF  E   ++S+  RK RIE  ++LCQ++  ++S    +   F
Sbjct: 179 DFSTEDLTYESLEERKTRIENVKSLCQTLISKSSSAEKLIQQF 221

>MANBA_BOVIN (Q29444) Beta-mannosidase precursor (EC 3.2.1.25) (Lysosomal beta A|
           mannosidase) (Mannanase) (Mannase)
          Length = 879

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +3

Query: 6   KMKSS--LIQSKLVQKEVLVKLD*MNINQVNNI 98
           K++SS  ++ SKLV  E +V +  +NI Q NNI
Sbjct: 234 KIESSFDVVSSKLVSGEAIVAIPELNIQQTNNI 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,660,750
Number of Sequences: 219361
Number of extensions: 655056
Number of successful extensions: 1428
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)