ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BCL6B_MOUSE (O88282) B-cell CLL/lymphoma 6 member B protein (Bcl... 29 2.8
2STRB1_STRGR (P08078) Inosamine-phosphate amidinotransferase 1 (E... 29 3.7

>BCL6B_MOUSE (O88282) B-cell CLL/lymphoma 6 member B protein (Bcl6-associated|
           zinc finger protein)
          Length = 474

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 236 PPATRAMPPPCKKLFSCRDC*SV*AC 159
           P + +A PPP  + FSC++C +V  C
Sbjct: 282 PASKQANPPPGSEFFSCQNCEAVAGC 307



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>STRB1_STRGR (P08078) Inosamine-phosphate amidinotransferase 1 (EC 2.1.4.2)|
           (Inosamine-phosphate amidinotransferase I)
           (Aminocyclitol amidinotransferase) (ADT)
          Length = 346

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 129 YHDMIIAHTHTRSHALAITATKQFLTWRRHGPR 227
           Y D ++  T    H LA   TK  +T RR GPR
Sbjct: 52  YPDRVLKETEEELHVLAAELTKLGVTVRRPGPR 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,293,088
Number of Sequences: 219361
Number of extensions: 598470
Number of successful extensions: 1108
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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