ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PUR4_XYLFA (Q9PDF6) Phosphoribosylformylglycinamidine synthase (... 28 4.5

>PUR4_XYLFA (Q9PDF6) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1322

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 132 AYFTSQATVAAPMMHDFGCWHCY 64
           A F S+     P +H  G WHCY
Sbjct: 16  ARFESRLQTTVPELHIVGAWHCY 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,864,355
Number of Sequences: 219361
Number of extensions: 566069
Number of successful extensions: 759
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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