ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 44 0.26
2gb|AF413553.1| Hypnodendron comatum ATP synthase beta (atpB) gen... 42 1.0
3gb|AC150413.2| Branchiostoma floridae clone CH302-61A17, complet... 42 1.0
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
5gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete... 42 1.0
6dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
7emb|AL928837.8| Zebrafish DNA sequence from clone CH211-105F16, ... 42 1.0
8gb|AC069509.16| Homo sapiens 3 BAC RP11-406M8 (Roswell Park Canc... 42 1.0
9gb|BC033454.1| Homo sapiens F-box protein 38, transcript variant... 40 4.0
10gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genom... 40 4.0
11gb|AC116476.6| Mus musculus chromosome 15, clone RP23-387K7, com... 40 4.0
12gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 40 4.0
13ref|XM_518023.1| PREDICTED: Pan troglodytes similar to FBXO38 pr... 40 4.0
14gb|AC132935.7| Mus musculus chromosome 15, clone RP24-142P21, co... 40 4.0
15gb|AC084295.10| Oryza sativa (japonica cultivar-group) chromosom... 40 4.0
16gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, com... 40 4.0
17gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, co... 40 4.0
18gb|AC127415.3| Mus musculus BAC clone RP23-450L4 from chromosome... 40 4.0
19gb|BC050424.1| Homo sapiens F-box protein 38, mRNA (cDNA clone M... 40 4.0
20gb|BC005873.2| Homo sapiens F-box protein 38, mRNA (cDNA clone I... 40 4.0
21gb|BC005849.2| Homo sapiens F-box protein 38, mRNA (cDNA clone I... 40 4.0
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.0
23gb|AY363102.1|AY363102S1 Mus musculus diadenosine triphosphate h... 40 4.0
24gb|AC121934.4| Mus musculus BAC clone RP24-207A18 from chromosom... 40 4.0
25gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, comp... 40 4.0
26emb|AL392167.7| Human DNA sequence from clone RP11-514M10 on chr... 40 4.0
27emb|AL353152.8| Human DNA sequence from clone RP11-359N11 on chr... 40 4.0
28gb|AC157896.3| Mus musculus chromosome 15, clone RP23-438M9, com... 40 4.0
29emb|CR522871.1| Desulfotalea psychrophila LSv54, large plasmid 40 4.0
30emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4,... 40 4.0
31emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 40 4.0
32emb|AL645695.18| Mouse DNA sequence from clone RP23-453H19 on ch... 40 4.0
33emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ... 40 4.0
34emb|BX649501.24| Zebrafish DNA sequence from clone DKEY-123F20 i... 40 4.0
35gb|AC153725.3| Medicago truncatula clone mth2-78c5, complete seq... 40 4.0
36dbj|AK024024.1| Homo sapiens cDNA FLJ13962 fis, clone Y79AA1001281 40 4.0
37gb|AC090588.5| Homo sapiens chromosome 11, clone RP11-384E5, com... 40 4.0
38gb|AC009643.8| Homo sapiens chromosome 11, clone RP11-111A24, co... 40 4.0
39ref|NM_205836.1| Homo sapiens F-box protein 38 (FBXO38), transcr... 40 4.0
40ref|NM_030793.3| Homo sapiens F-box protein 38 (FBXO38), transcr... 40 4.0
41gb|AC091948.3| Homo sapiens chromosome 5 clone RP11-373N22, comp... 40 4.0
42emb|BX005461.8| Zebrafish DNA sequence from clone DKEY-192L18 in... 40 4.0
43gb|AC154708.3| Mus musculus BAC clone RP24-355K5 from chromosome... 40 4.0
44gb|AC147632.3| Mus musculus BAC clone RP23-326H18 from chromosom... 40 4.0
45gb|AC026124.35| Homo sapiens 12 BAC RP11-305O6 (Roswell Park Can... 40 4.0
46gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H0... 40 4.0
47dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
48gb|AF251055.1|AF251055 Homo sapiens 5-HT receptor mRNA, complete... 40 4.0
49dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
50dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
51dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
52dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
53gb|AF367845.1| Aplysia californica cytoplasmic polyadenylation e... 40 4.0
54gb|AF367844.1| Aplysia californica cytoplasmic polyadenylation e... 40 4.0
55gb|AC012597.24|AC012597 Homo sapiens 12 BAC RP11-47G13 (Roswell ... 40 4.0
56gb|AC114939.2| Homo sapiens chromosome 5 clone CTD-2283N19, comp... 40 4.0
57dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
58gb|AC007660.2|AC007660 Arabidopsis thaliana chromosome II sectio... 40 4.0
59dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
60dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
61dbj|AB024036.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 4.0
62dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
63dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
64emb|BX649499.11| Zebrafish DNA sequence from clone DKEY-60A16 in... 40 4.0
65dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
66gb|AY998873.1| Lates calcarifer clone Lca86 microsatellite sequence 40 4.0
67dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.0
68dbj|AP004952.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 4.0
69emb|AL844166.6| Mouse DNA sequence from clone RP23-107K21 on chr... 40 4.0
70emb|AL832841.1|HSM804152 Homo sapiens mRNA; cDNA DKFZp667C0225 (... 40 4.0
71dbj|AB036332.1| Candida albicans eIF4E gene for cap-binding prot... 40 4.0 
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 177    aaataattatactagcggataacact 202
              ||||||| ||||||||||||||||||
Sbjct: 284010 aaataatcatactagcggataacact 283985
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>gb|AF413553.1| Hypnodendron comatum ATP synthase beta (atpB) gene, partial cds;
           and atpB-rbcL intergenic spacer, partial sequence;
           chloroplast
          Length = 914

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 142 ttaaaaacatattaaaaactaacaa 166
           |||||||||||||||||| ||||||
Sbjct: 659 ttaaaaacatattaaaaaataacaa 635
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>gb|AC150413.2| Branchiostoma floridae clone CH302-61A17, complete sequence
          Length = 240260

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  taacaacaatggggcaaaata 181
            |||||||||||||||||||||
Sbjct: 2157 taacaacaatggggcaaaata 2137
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 37       tgcaaggcacaggctcttttgctagtaat 65
                ||||| |||||||| ||||||||||||||
Sbjct: 20445721 tgcaacgcacaggcacttttgctagtaat 20445749
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>gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete sequence
          Length = 106526

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   aaaacatattaaaaactaaca 165
             |||||||||||||||||||||
Sbjct: 15459 aaaacatattaaaaactaaca 15479
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>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0659D09
          Length = 168253

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 37    tgcaaggcacaggctcttttgctagtaat 65
             ||||| |||||||| ||||||||||||||
Sbjct: 18016 tgcaacgcacaggcacttttgctagtaat 18044
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>emb|AL928837.8| Zebrafish DNA sequence from clone CH211-105F16, complete sequence
          Length = 186085

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    tttatttgtatatgtttccaa 36
             |||||||||||||||||||||
Sbjct: 78462 tttatttgtatatgtttccaa 78442
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>gb|AC069509.16| Homo sapiens 3 BAC RP11-406M8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152832

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 141    cttaaaaacatattaaaaact 161
              |||||||||||||||||||||
Sbjct: 111580 cttaaaaacatattaaaaact 111600
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>gb|BC033454.1| Homo sapiens F-box protein 38, transcript variant 1, mRNA (cDNA clone
            MGC:21031 IMAGE:4510274), complete cds
          Length = 4169

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aataacaatgccaacatcca 82
            ||||||||||||||||||||
Sbjct: 1608 aataacaatgccaacatcca 1627
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>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete
             sequence
          Length = 126163

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 37    tgcaaggcacaggctcttttgctagtaa 64
             ||||| |||||||| |||||||||||||
Sbjct: 17593 tgcaacgcacaggcacttttgctagtaa 17620
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>gb|AC116476.6| Mus musculus chromosome 15, clone RP23-387K7, complete sequence
          Length = 198541

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    aaaacatattaaaaactaacaaca 168
              ||||||||||||||||||| ||||
Sbjct: 181049 aaaacatattaaaaactaaaaaca 181026
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     aataggcaaatcaaccttaa 145
               ||||||||||||||||||||
Sbjct: 2423933 aataggcaaatcaaccttaa 2423952
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>ref|XM_518023.1| PREDICTED: Pan troglodytes similar to FBXO38 protein (LOC462174),
            mRNA
          Length = 2803

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aataacaatgccaacatcca 82
            ||||||||||||||||||||
Sbjct: 1637 aataacaatgccaacatcca 1656
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>gb|AC132935.7| Mus musculus chromosome 15, clone RP24-142P21, complete sequence
          Length = 140484

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   aaaacatattaaaaactaacaaca 168
             ||||||||||||||||||| ||||
Sbjct: 59459 aaaacatattaaaaactaaaaaca 59482
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>gb|AC084295.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0015K03, complete sequence
          Length = 89172

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 37    tgcaaggcacaggctcttttgctagtaa 64
             ||||| |||||||| |||||||||||||
Sbjct: 86631 tgcaacgcacaggcacttttgctagtaa 86658
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>gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, complete sequence
          Length = 195375

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     tcaatgttttatttgtatat 28
             ||||||||||||||||||||
Sbjct: 44340 tcaatgttttatttgtatat 44359
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>gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, complete sequence
          Length = 217156

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    acactcagggccttgctaac 217
              ||||||||||||||||||||
Sbjct: 153779 acactcagggccttgctaac 153798
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>gb|AC127415.3| Mus musculus BAC clone RP23-450L4 from chromosome 19, complete sequence
          Length = 177302

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     tttatttgtatatgtttcca 35
              ||||||||||||||||||||
Sbjct: 153799 tttatttgtatatgtttcca 153818
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>gb|BC050424.1| Homo sapiens F-box protein 38, mRNA (cDNA clone MGC:54126
            IMAGE:6472693), complete cds
          Length = 3618

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aataacaatgccaacatcca 82
            ||||||||||||||||||||
Sbjct: 1580 aataacaatgccaacatcca 1599
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>gb|BC005873.2| Homo sapiens F-box protein 38, mRNA (cDNA clone IMAGE:2960128),
           partial cds
          Length = 3060

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  aataacaatgccaacatcca 82
           ||||||||||||||||||||
Sbjct: 249 aataacaatgccaacatcca 268
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>gb|BC005849.2| Homo sapiens F-box protein 38, mRNA (cDNA clone IMAGE:2960128),
           partial cds
          Length = 3060

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  aataacaatgccaacatcca 82
           ||||||||||||||||||||
Sbjct: 249 aataacaatgccaacatcca 268
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 37       tgcaaggcacaggctcttttgctagtaa 64
                ||||| |||||||| |||||||||||||
Sbjct: 16092413 tgcaacgcacaggcacttttgctagtaa 16092440
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>gb|AY363102.1|AY363102S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 1 and
              2
          Length = 309506

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     atgccaacatccaaaatcat 89
              ||||||||||||||||||||
Sbjct: 175084 atgccaacatccaaaatcat 175065
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>gb|AC121934.4| Mus musculus BAC clone RP24-207A18 from chromosome 5, complete sequence
          Length = 152037

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 132   caaatcaaccttaaaaacatattaaaaa 159
             |||| ||||||||||||||||| |||||
Sbjct: 41424 caaaccaaccttaaaaacatataaaaaa 41397
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>gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, complete sequence
          Length = 247848

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    ggataacactcagggccttg 212
              ||||||||||||||||||||
Sbjct: 139020 ggataacactcagggccttg 139001
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>emb|AL392167.7| Human DNA sequence from clone RP11-514M10 on chromosome 10, complete
             sequence
          Length = 191765

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   atattaaaaactaacaacaa 169
             ||||||||||||||||||||
Sbjct: 37246 atattaaaaactaacaacaa 37265
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>emb|AL353152.8| Human DNA sequence from clone RP11-359N11 on chromosome 6 Contains two
             novel genes (including FLJ32264) and a CpG island,
             complete sequence
          Length = 119416

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   attaaaaactaacaacaatg 171
             ||||||||||||||||||||
Sbjct: 53987 attaaaaactaacaacaatg 54006
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>gb|AC157896.3| Mus musculus chromosome 15, clone RP23-438M9, complete sequence
          Length = 204574

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   aaaacatattaaaaactaacaaca 168
             ||||||||||||||||||| ||||
Sbjct: 61603 aaaacatattaaaaactaaaaaca 61580
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>emb|CR522871.1| Desulfotalea psychrophila LSv54, large plasmid
          Length = 121587

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ccttaaaaacatattaaaaa 159
             ||||||||||||||||||||
Sbjct: 26231 ccttaaaaacatattaaaaa 26212
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>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11,
             complete sequence
          Length = 143582

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 210   ttgctaactacttgctgctactttactatttg 241
             ||||||| |||||||||||||| | |||||||
Sbjct: 99902 ttgctaagtacttgctgctactatgctatttg 99871
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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
             complete sequence
          Length = 164577

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 210   ttgctaactacttgctgctactttactatttg 241
             ||||||| |||||||||||||| | |||||||
Sbjct: 42522 ttgctaagtacttgctgctactatgctatttg 42491
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>emb|AL645695.18| Mouse DNA sequence from clone RP23-453H19 on chromosome 11 Contains the
             Pctp gene for phosphatidylcholine transfer protein,
             complete sequence
          Length = 142743

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    atgttttatttgtatatgtt 31
             ||||||||||||||||||||
Sbjct: 50495 atgttttatttgtatatgtt 50514
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>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   taaaaacatattaaaaactaacaa 166
             |||||||||||| |||||||||||
Sbjct: 38132 taaaaacatatttaaaactaacaa 38109
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>emb|BX649501.24| Zebrafish DNA sequence from clone DKEY-123F20 in linkage group 5,
              complete sequence
          Length = 194220

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     tgttttatttgtatatgttt 32
              ||||||||||||||||||||
Sbjct: 179070 tgttttatttgtatatgttt 179051
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>gb|AC153725.3| Medicago truncatula clone mth2-78c5, complete sequence
          Length = 137377

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    aaaaacatattaaaaactaa 163
              ||||||||||||||||||||
Sbjct: 108852 aaaaacatattaaaaactaa 108833
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>dbj|AK024024.1| Homo sapiens cDNA FLJ13962 fis, clone Y79AA1001281
          Length = 2166

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aataacaatgccaacatcca 82
            ||||||||||||||||||||
Sbjct: 1596 aataacaatgccaacatcca 1615
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>gb|AC090588.5| Homo sapiens chromosome 11, clone RP11-384E5, complete sequence
          Length = 152572

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ttgtatatgtttccaatgca 40
              ||||||||||||||||||||
Sbjct: 104439 ttgtatatgtttccaatgca 104420
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>gb|AC009643.8| Homo sapiens chromosome 11, clone RP11-111A24, complete sequence
          Length = 183169

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     ttgtatatgtttccaatgca 40
              ||||||||||||||||||||
Sbjct: 157231 ttgtatatgtttccaatgca 157250
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>ref|NM_205836.1| Homo sapiens F-box protein 38 (FBXO38), transcript variant 2, mRNA
          Length = 4413

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aataacaatgccaacatcca 82
            ||||||||||||||||||||
Sbjct: 1627 aataacaatgccaacatcca 1646
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>ref|NM_030793.3| Homo sapiens F-box protein 38 (FBXO38), transcript variant 1, mRNA
          Length = 4190

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aataacaatgccaacatcca 82
            ||||||||||||||||||||
Sbjct: 1627 aataacaatgccaacatcca 1646
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>gb|AC091948.3| Homo sapiens chromosome 5 clone RP11-373N22, complete sequence
          Length = 172162

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aataacaatgccaacatcca 82
              ||||||||||||||||||||
Sbjct: 166903 aataacaatgccaacatcca 166922
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>emb|BX005461.8| Zebrafish DNA sequence from clone DKEY-192L18 in linkage group 24,
             complete sequence
          Length = 162216

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tgttttatttgtatatgttt 32
             ||||||||||||||||||||
Sbjct: 40428 tgttttatttgtatatgttt 40447
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>gb|AC154708.3| Mus musculus BAC clone RP24-355K5 from chromosome 14, complete sequence
          Length = 180538

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    atgccaacatccaaaatcat 89
             ||||||||||||||||||||
Sbjct: 91164 atgccaacatccaaaatcat 91145
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>gb|AC147632.3| Mus musculus BAC clone RP23-326H18 from chromosome 5, complete sequence
          Length = 185519

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 132   caaatcaaccttaaaaacatattaaaaa 159
             |||| ||||||||||||||||| |||||
Sbjct: 43471 caaaccaaccttaaaaacatataaaaaa 43498
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>gb|AC026124.35| Homo sapiens 12 BAC RP11-305O6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181835

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 41    aggcacaggctcttttgctagtaataac 68
             ||||||||||||||| ||| ||||||||
Sbjct: 23496 aggcacaggctctttggcttgtaataac 23469
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>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence
          Length = 161873

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 143    taaaaacatattaaaaactaacaa 166
              ||||||||||||| ||||||||||
Sbjct: 144693 taaaaacatattataaactaacaa 144670
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 210      ttgctaactacttgctgctactttactatttg 241
                ||||||| |||||||||||||| | |||||||
Sbjct: 25315963 ttgctaagtacttgctgctactatgctatttg 25315932
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>gb|AF251055.1|AF251055 Homo sapiens 5-HT receptor mRNA, complete cds
          Length = 2860

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  aataacaatgccaacatcca 82
           ||||||||||||||||||||
Sbjct: 613 aataacaatgccaacatcca 632
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 143     taaaaacatattaaaaactaacaa 166
               ||||||||||||| ||||||||||
Sbjct: 6285210 taaaaacatattataaactaacaa 6285233
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 210      ttgctaactacttgctgctactttactatttg 241
                ||||||| |||||||||||||| | |||||||
Sbjct: 24995671 ttgctaagtacttgctgctactatgctatttg 24995702
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 37       tgcaaggcacaggctcttttgctagtaa 64
                ||||| |||||||| |||||||||||||
Sbjct: 16086946 tgcaacgcacaggcacttttgctagtaa 16086973
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 37       tgcaaggcacaggctcttttgctagtaa 64
                ||||| |||||||| |||||||||||||
Sbjct: 11189260 tgcaacgcacaggcacttttgctagtaa 11189233
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>gb|AF367845.1| Aplysia californica cytoplasmic polyadenylation element-binding
            protein isoform 2 mRNA, complete cds
          Length = 3122

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 161  taacaacaatggggcaaaataatt 184
            ||||||||||||| ||||||||||
Sbjct: 2424 taacaacaatgggtcaaaataatt 2401
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>gb|AF367844.1| Aplysia californica cytoplasmic polyadenylation element-binding
            protein isoform 1 mRNA, complete cds
          Length = 3491

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 161  taacaacaatggggcaaaataatt 184
            ||||||||||||| ||||||||||
Sbjct: 2793 taacaacaatgggtcaaaataatt 2770
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>gb|AC012597.24|AC012597 Homo sapiens 12 BAC RP11-47G13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 158591

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 41    aggcacaggctcttttgctagtaataac 68
             ||||||||||||||| ||| ||||||||
Sbjct: 34689 aggcacaggctctttggcttgtaataac 34716
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>gb|AC114939.2| Homo sapiens chromosome 5 clone CTD-2283N19, complete sequence
          Length = 104053

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aataacaatgccaacatcca 82
             ||||||||||||||||||||
Sbjct: 22975 aataacaatgccaacatcca 22994
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>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0663H05
          Length = 161938

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   taaaaacatattaaaaactaacaa 166
             ||||||||||||| ||||||||||
Sbjct: 17489 taaaaacatattataaactaacaa 17512
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>gb|AC007660.2|AC007660 Arabidopsis thaliana chromosome II section 220 of 255 of the complete
             sequence. Sequence from clones T2P4, T7D17, T20B5
          Length = 72808

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   aaaaacatattaaaaactaa 163
             ||||||||||||||||||||
Sbjct: 48242 aaaaacatattaaaaactaa 48261
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>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1146F03
          Length = 137047

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 37    tgcaaggcacaggctcttttgctagtaa 64
             ||||| |||||||| |||||||||||||
Sbjct: 81053 tgcaacgcacaggcacttttgctagtaa 81026
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>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1190_B07
          Length = 140200

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 143    taaaaacatattaaaaactaacaa 166
              ||||||||||||| ||||||||||
Sbjct: 130493 taaaaacatattataaactaacaa 130516
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>dbj|AB024036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC12
          Length = 87799

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    atgttttatttgtatatgtt 31
             ||||||||||||||||||||
Sbjct: 74132 atgttttatttgtatatgtt 74113
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>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0025J22
          Length = 175355

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 210   ttgctaactacttgctgctactttactatttg 241
             ||||||| |||||||||||||| | |||||||
Sbjct: 51787 ttgctaagtacttgctgctactatgctatttg 51818
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>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1134_H03
          Length = 135914

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 210   ttgctaactacttgctgctactttactatttg 241
             ||||||| |||||||||||||| | |||||||
Sbjct: 97386 ttgctaagtacttgctgctactatgctatttg 97417
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>emb|BX649499.11| Zebrafish DNA sequence from clone DKEY-60A16 in linkage group 20,
             complete sequence
          Length = 201391

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     tcaatgttttatttgtatat 28
             ||||||||||||||||||||
Sbjct: 71652 tcaatgttttatttgtatat 71671
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>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0035H10
          Length = 109475

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 37    tgcaaggcacaggctcttttgctagtaa 64
             ||||| |||||||| |||||||||||||
Sbjct: 87993 tgcaacgcacaggcacttttgctagtaa 87966
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>gb|AY998873.1| Lates calcarifer clone Lca86 microsatellite sequence
          Length = 660

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  tgttttatttgtatatgttt 32
           ||||||||||||||||||||
Sbjct: 304 tgttttatttgtatatgttt 285
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>dbj|AP005014.3| Homo sapiens genomic DNA, chromosome 11 clone:RP13-259F12, complete
             sequence
          Length = 167444

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   agtaaaataggcaaatcaac 140
             ||||||||||||||||||||
Sbjct: 74608 agtaaaataggcaaatcaac 74589
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>dbj|AP004952.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19C08, TM0125,
             complete sequence
          Length = 89551

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   attaaaaactaacaacaatg 171
             ||||||||||||||||||||
Sbjct: 19314 attaaaaactaacaacaatg 19333
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>emb|AL844166.6| Mouse DNA sequence from clone RP23-107K21 on chromosome 2, complete
              sequence
          Length = 215505

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 138    aaccttaaaaacatattaaaaact 161
              ||||||||||||||||||| ||||
Sbjct: 184049 aaccttaaaaacatattaagaact 184072
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>emb|AL832841.1|HSM804152 Homo sapiens mRNA; cDNA DKFZp667C0225 (from clone DKFZp667C0225)
          Length = 2905

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  aataacaatgccaacatcca 82
           ||||||||||||||||||||
Sbjct: 142 aataacaatgccaacatcca 161
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>dbj|AB036332.1| Candida albicans eIF4E gene for cap-binding protein, complete cds
          Length = 1369

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 tactttactatttgatcaac 247
           ||||||||||||||||||||
Sbjct: 394 tactttactatttgatcaac 375


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,307,069
Number of Sequences: 3902068
Number of extensions: 3307069
Number of successful extensions: 74864
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74558
Number of HSP's gapped (non-prelim): 306
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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