>LRP2_HUMAN (P98164) Low-density lipoprotein receptor-related protein 2 precursor|
            (Megalin) (Glycoprotein 330) (gp330)
          Length = 4655

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -1

Query: 372  SHCAPEK---GYF-CRPGTVFPEARVCSTRASFGDESDDLLEEQ*FEVHAC 232
            SHCA      G F C  G   P+A  C      GD SD+ +EE     H C
Sbjct: 3628 SHCASRTCRPGQFRCANGRCIPQAWKCDVDNDCGDHSDEPIEECMSSAHLC 3678

>HSLV_BARQU (Q6G0Q0) ATP-dependent protease hslV (EC 3.4.25.-)|
          Length = 193

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
 Frame = -3

Query: 373 LALRAGEGLLLPAGDG-VSGGESMLDPSQFRRRKRRPSGGTVIRGACMHACAGSSGSAFK 197
           + +R G G ++ AGDG VS G++++  +  R+ +R    GTVI G      AG++  AF 
Sbjct: 15  ITVRKG-GKVVIAGDGQVSFGQTIMKGNA-RKVRRLGKSGTVIAG-----FAGATADAFT 67

Query: 196 FXXXXXXXXXLYV-----ACLISSRDWSIDLY 116
                      Y      AC+  ++DW  D Y
Sbjct: 68  LLERLETKLEQYPDQLMRACVELAKDWRTDRY 99

>ERO1_ASHGO (Q75BB5) Endoplasmic oxidoreductin-1 precursor (EC 1.8.4.-)|
          Length = 546

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 326 CFRRREYARPEPVSATKA-TTFWRNSDS 246
           C RRRE+ARPEP+S      T + N DS
Sbjct: 144 CGRRREFARPEPLSIDYCDVTDFTNKDS 171

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 372  SHCAPEKGY-FCRPGTVFPEARVCS 301
            S C P+ G   CRPGT+ P+ R C+
Sbjct: 2079 SECHPQSGQCHCRPGTMGPQCRECA 2103

>NUDEL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-)|
          Length = 2616

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 342  CRPGTVFPEARVCSTRASFGDESDDLLEEQ*FEVHACMHAPGQAAAHLSLDC 187
            C  GT  P+A +C+ R+   D SD+  EE          APG+     S  C
Sbjct: 2315 CPLGTCLPQAAMCNGRSDCHDGSDE--EETKCRQQKQQCAPGEMKCRTSFKC 2364

>NOS3_MOUSE (P70313) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1201

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 237 HAPRITVPPEGRRFRR-RNWLGSSI 308
           H+P +T PP+G RF R +NW   SI
Sbjct: 53  HSPPLTRPPDGPRFPRVKNWEVGSI 77

>PYRG_XANAC (Q8PLS3) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 554

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 370 ALRAGEGLLLPAGDGVSGGESMLDPSQFRRRKRRPSGG 257
           AL+  +G+L+P G G  G E  +  S+F R ++ P  G
Sbjct: 341 ALQDIDGILVPGGFGDRGFEGKVQTSKFAREQKVPYFG 378

>PYRG_ASHGO (Q751L7) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 576

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 370 ALRAGEGLLLPAGDGVSGGESMLDPSQFRRRKRRPSGGTVI 248
           +L + +G+L+P G G  G E M+  +++ R  + P  G  +
Sbjct: 365 SLSSSDGILVPGGFGTRGTEGMILAAKWARENKIPYLGVCL 405

>KPYR_HUMAN (P30613) Pyruvate kinase isozymes R/L (EC 2.7.1.40) (R-type/L-type|
           pyruvate kinase) (Red cell/liver pyruvate kinase)
          Length = 574

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 244 LESLFLQKVVAFVAETGSGRAYSRLRKHRPRPAEVALLRRA 366
           +E+ F     A +  T +GR+   L ++RPR A +A+ R A
Sbjct: 460 VEAAFKCCAAAIIVLTTTGRSAQLLSRYRPRAAVIAVTRSA 500

>PYRG_NEUCR (Q7RZV2) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 568

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 355 EGLLLPAGDGVSGGESMLDPSQFRRRKRRPSGGTVI 248
           +G+L+P G G  G E M+  +Q+ R ++ P  G  +
Sbjct: 357 KGILVPGGFGHRGTEGMIRAAQWAREQKTPFLGVCL 392

>PYRG_RHILO (Q98MF0) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 542

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -3

Query: 352 GLLLPAGDGVSGGESMLDPSQFRRRKRRPSGGTV--IRGACMHACAGSSG 209
           G+L+P G G  G E  +  ++F R ++ P  G    ++ AC+ A    +G
Sbjct: 347 GILVPGGFGERGSEGKILAAKFARERKVPYFGICFGMQMACIEAARSLAG 396

>LRP8_MOUSE (Q924X6) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2)
          Length = 996

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/71 (22%), Positives = 30/71 (42%)
 Frame = -1

Query: 375 DSHCAPEKGYFCRPGTVFPEARVCSTRASFGDESDDLLEEQ*FEVHACMHAPGQAAAHLS 196
           +S C   + + C+ G      +VC  +    D SD+   ++   ++ C+H  G   +H+ 
Sbjct: 328 ESTCEGPRRFQCKSGECVDGGKVCDDQRDCRDWSDE--PQKVCGLNECLHNNG-GCSHIC 384

Query: 195 LDCDADFNVAC 163
            D    F   C
Sbjct: 385 TDLKIGFECTC 395

>KPYR_CANFA (Q29536) Pyruvate kinase isozyme R (EC 2.7.1.40) (Fragment)|
          Length = 519

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 244 LESLFLQKVVAFVAETGSGRAYSRLRKHRPRPAEVALLRRA 366
           +E+ F     A +  T +GR+   L ++RPR A +A+ R A
Sbjct: 405 VEAAFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVTRSA 445

>COX1_PLACH (O99255) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 476

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 185 MLTLMLLVRGVFNFFQRLEYRSLLVVSLFD*SELLYVILLWF 60
           +LTL +L  GV      L + +L     F    +LY  LLWF
Sbjct: 202 LLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLLWF 243

>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
 Frame = -1

Query: 366  CAP-----EKGYFCRPGTVFPEARVCSTRASFGDESDDLLE----EQ*FEVHACMHAPGQ 214
            CAP     E  + C      P+  VC      GD SD+ L+    +   E   C  A G+
Sbjct: 2799 CAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDEFLQCGYRQCGPEEFRC--ADGR 2856

Query: 213  AAAHLSLDCDADFN 172
               +    CD DF+
Sbjct: 2857 CLVNTLWQCDGDFD 2870

>KPYR_MOUSE (P53657) Pyruvate kinase isozymes R/L (EC 2.7.1.40) (L-PK)|
          Length = 574

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 244 LESLFLQKVVAFVAETGSGRAYSRLRKHRPRPAEVALLRRA 366
           +E+ F     A +  T +GR+   L ++RPR A +A+ R A
Sbjct: 460 VEASFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAVTRSA 500

>PYRG_RHIME (Q92QA0) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 542

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 352 GLLLPAGDGVSGGESMLDPSQFRRRKRRPSGG 257
           G+L+P G G  G E  ++ ++F R ++ P  G
Sbjct: 347 GILVPGGFGERGSEGKINAARFARERKVPYFG 378


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,805,711
Number of Sequences: 219361
Number of extensions: 862464
Number of successful extensions: 2603
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2603
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)