ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart36f06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 214 bits (108), Expect = 2e-52 Identities = 280/335 (83%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 140 gcgagctctagcgcggcgccaaaccggtcgctgagatcaacatcaccgggcaccatccca 199 |||||||| ||| ||||||| |||||||||| || || || || || ||| ||||||| Sbjct: 16664350 gcgagctcaagcacggcgccgaaccggtcgccgacgtcgacgtcgccaggcgccatcccc 16664409 Query: 200 tccggcagcctccattcgaactcgtggagcagcgatgccaacaccatcggcacgaccgtc 259 |||||||||||||| || | | ||| | || || |||| |||||| ||||| |||| | Sbjct: 16664410 tccggcagcctccactccagcgagtgcaccatcgccgccaccaccatgggcaccaccgcc 16664469 Query: 260 acggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaac 319 ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||| | | Sbjct: 16664470 acggccagcggtatcccggggcacgccctccggccggacccgaacgggatgaactcgagc 16664529 Query: 320 gccctccccctgaagtccacctccctgtccaagaacctctccggcatgaacacccccggc 379 | |||||||| | ||||| |||||||| ||||||||||||||||| |||| | ||||| Sbjct: 16664530 gtcctcccccagtagtccgcctccctgcccaagaacctctccggcgagaacgcatccggc 16664589 Query: 380 t-cggc--ccacacctcggggtccctcccgatggcccacacgttgatcaggacacgggcg 436 | |||| |||| || |||||||||||||||| |||||| |||||||||| || |||||| Sbjct: 16664590 tccggcgaccacgccgcggggtccctcccgatcgcccacgcgttgatcagcacgcgggcg 16664649 Query: 437 cccttgggcaccgagaagccgcccagcgtcacgcc 471 || ||||||||||| ||||||| ||||||||||| Sbjct: 16664650 ccgctgggcaccgagtagccgccgagcgtcacgcc 16664684 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 206 agcctccattcgaactcgtggagcagcgatgccaacaccatcggcacgaccgtcacggcc 265 |||| ||| |||||| ||||||||||||| |||||||||| || ||| ||| || ||| Sbjct: 16656732 agccgccactcgaacgcgtggagcagcgacgccaacaccagcgtcaccaccctcgtcgcc 16656791 Query: 266 agcggcatcccggggcacgccctccgccccgacccgaacggtatgaactcca 317 | |||| |||| ||||||||||||| ||||| ||||||||| |||||||||| Sbjct: 16656792 atcggcgtccccgggcacgccctcctccccgccccgaacggcatgaactcca 16656843 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccga 407 ||||||||| ||||||| |||| || ||||| | ||||| || ||||||||||||||| Sbjct: 20474295 ccaagaaccgctccggccggaactcctccggcgagccccacgccgcggggtccctcccga 20474236 Query: 408 tggcccacacgttga 422 | |||||| |||||| Sbjct: 20474235 tcgcccacgcgttga 20474221 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||||||| || ||||| || |||||| || |||||| | ||||||| Sbjct: 16335259 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtcgcggccgatggt 16335200 Query: 412 ccacacg 418 ||||||| Sbjct: 16335199 ccacacg 16335193 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 395 gggtccctcccgatggcccacacgttgat 423 |||||||||||||| |||||||||||||| Sbjct: 20469131 gggtccctcccgatcgcccacacgttgat 20469103 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtc 399 ||||||||||||||||||| || ||||| || |||||| || |||||| Sbjct: 16341540 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtc 16341493 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 cggctcggcccacacctcggggtc 399 ||||||||||||||| |||||||| Sbjct: 20391441 cggctcggcccacacgtcggggtc 20391418 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 16307167 gaacctctccggcatgaactcctccggc 16307194
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 214 bits (108), Expect = 2e-52 Identities = 280/335 (83%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 140 gcgagctctagcgcggcgccaaaccggtcgctgagatcaacatcaccgggcaccatccca 199 |||||||| ||| ||||||| |||||||||| || || || || || ||| ||||||| Sbjct: 13044 gcgagctcaagcacggcgccgaaccggtcgccgacgtcgacgtcgccaggcgccatcccc 13103 Query: 200 tccggcagcctccattcgaactcgtggagcagcgatgccaacaccatcggcacgaccgtc 259 |||||||||||||| || | | ||| | || || |||| |||||| ||||| |||| | Sbjct: 13104 tccggcagcctccactccagcgagtgcaccatcgccgccaccaccatgggcaccaccgcc 13163 Query: 260 acggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaac 319 ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||| | | Sbjct: 13164 acggccagcggtatcccggggcacgccctccggccggacccgaacgggatgaactcgagc 13223 Query: 320 gccctccccctgaagtccacctccctgtccaagaacctctccggcatgaacacccccggc 379 | |||||||| | ||||| |||||||| ||||||||||||||||| |||| | ||||| Sbjct: 13224 gtcctcccccagtagtccgcctccctgcccaagaacctctccggcgagaacgcatccggc 13283 Query: 380 t-cggc--ccacacctcggggtccctcccgatggcccacacgttgatcaggacacgggcg 436 | |||| |||| || |||||||||||||||| |||||| |||||||||| || |||||| Sbjct: 13284 tccggcgaccacgccgcggggtccctcccgatcgcccacgcgttgatcagcacgcgggcg 13343 Query: 437 cccttgggcaccgagaagccgcccagcgtcacgcc 471 || ||||||||||| ||||||| ||||||||||| Sbjct: 13344 ccgctgggcaccgagtagccgccgagcgtcacgcc 13378 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 206 agcctccattcgaactcgtggagcagcgatgccaacaccatcggcacgaccgtcacggcc 265 |||| ||| |||||| ||||||||||||| |||||||||| || ||| ||| || ||| Sbjct: 5426 agccgccactcgaacgcgtggagcagcgacgccaacaccagcgtcaccaccctcgtcgcc 5485 Query: 266 agcggcatcccggggcacgccctccgccccgacccgaacggtatgaactcca 317 | |||| |||| ||||||||||||| ||||| ||||||||| |||||||||| Sbjct: 5486 atcggcgtccccgggcacgccctcctccccgccccgaacggcatgaactcca 5537
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 214 bits (108), Expect = 2e-52 Identities = 280/335 (83%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 140 gcgagctctagcgcggcgccaaaccggtcgctgagatcaacatcaccgggcaccatccca 199 |||||||| ||| ||||||| |||||||||| || || || || || ||| ||||||| Sbjct: 72489 gcgagctcaagcacggcgccgaaccggtcgccgacgtcgacgtcgccaggcgccatcccc 72548 Query: 200 tccggcagcctccattcgaactcgtggagcagcgatgccaacaccatcggcacgaccgtc 259 |||||||||||||| || | | ||| | || || |||| |||||| ||||| |||| | Sbjct: 72549 tccggcagcctccactccagcgagtgcaccatcgccgccaccaccatgggcaccaccgcc 72608 Query: 260 acggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaac 319 ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||| | | Sbjct: 72609 acggccagcggtatcccggggcacgccctccggccggacccgaacgggatgaactcgagc 72668 Query: 320 gccctccccctgaagtccacctccctgtccaagaacctctccggcatgaacacccccggc 379 | |||||||| | ||||| |||||||| ||||||||||||||||| |||| | ||||| Sbjct: 72669 gtcctcccccagtagtccgcctccctgcccaagaacctctccggcgagaacgcatccggc 72728 Query: 380 t-cggc--ccacacctcggggtccctcccgatggcccacacgttgatcaggacacgggcg 436 | |||| |||| || |||||||||||||||| |||||| |||||||||| || |||||| Sbjct: 72729 tccggcgaccacgccgcggggtccctcccgatcgcccacgcgttgatcagcacgcgggcg 72788 Query: 437 cccttgggcaccgagaagccgcccagcgtcacgcc 471 || ||||||||||| ||||||| ||||||||||| Sbjct: 72789 ccgctgggcaccgagtagccgccgagcgtcacgcc 72823 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 206 agcctccattcgaactcgtggagcagcgatgccaacaccatcggcacgaccgtcacggcc 265 |||| ||| |||||| ||||||||||||| |||||||||| || ||| ||| || ||| Sbjct: 64871 agccgccactcgaacgcgtggagcagcgacgccaacaccagcgtcaccaccctcgtcgcc 64930 Query: 266 agcggcatcccggggcacgccctccgccccgacccgaacggtatgaactcca 317 | |||| |||| ||||||||||||| ||||| ||||||||| |||||||||| Sbjct: 64931 atcggcgtccccgggcacgccctcctccccgccccgaacggcatgaactcca 64982
>dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-D04, full insert sequence Length = 1862 Score = 214 bits (108), Expect = 2e-52 Identities = 280/335 (83%), Gaps = 3/335 (0%) Strand = Plus / Minus Query: 140 gcgagctctagcgcggcgccaaaccggtcgctgagatcaacatcaccgggcaccatccca 199 |||||||| ||| ||||||| |||||||||| || || || || || ||| ||||||| Sbjct: 1494 gcgagctcaagcacggcgccgaaccggtcgccgacgtcgacgtcgccaggcgccatcccc 1435 Query: 200 tccggcagcctccattcgaactcgtggagcagcgatgccaacaccatcggcacgaccgtc 259 |||||||||||||| || | | ||| | || || |||| |||||| ||||| |||| | Sbjct: 1434 tccggcagcctccactccagcgagtgcaccatcgccgccaccaccatgggcaccaccgcc 1375 Query: 260 acggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaac 319 ||||||||||| |||||||||||||||||||| || ||||||||||| |||||||| | | Sbjct: 1374 acggccagcggtatcccggggcacgccctccggccggacccgaacgggatgaactcgagc 1315 Query: 320 gccctccccctgaagtccacctccctgtccaagaacctctccggcatgaacacccccggc 379 | |||||||| | ||||| |||||||| ||||||||||||||||| |||| | ||||| Sbjct: 1314 gtcctcccccagtagtccgcctccctgcccaagaacctctccggcgagaacgcatccggc 1255 Query: 380 t-cggc--ccacacctcggggtccctcccgatggcccacacgttgatcaggacacgggcg 436 | |||| |||| || |||||||||||||||| |||||| |||||||||| || |||||| Sbjct: 1254 tccggcgaccacgccgcggggtccctcccgatcgcccacgcgttgatcagcacgcgggcg 1195 Query: 437 cccttgggcaccgagaagccgcccagcgtcacgcc 471 || ||||||||||| ||||||| ||||||||||| Sbjct: 1194 ccgctgggcaccgagtagccgccgagcgtcacgcc 1160
>emb|AJ438350.1|PAB438350 Picea abies partial mRNA for cytochrome P450-like protein, (CYP81 gene) Length = 187 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 421 gatcaggacacgggcgcccttgggcaccgagaagccgcccagcgtcacgccaggctccga 480 ||||||||||||||||||||| ||||| ||||||||||| ||||||||||| | |||||| Sbjct: 187 gatcaggacacgggcgcccttcggcacagagaagccgccgagcgtcacgccggtctccga 128 Query: 481 ca 482 || Sbjct: 127 ca 126
>ref|XM_482757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||| ||| || ||| | || |||||| ||| ||||||| ||||||| Sbjct: 1293 gaacctctccggcataaactcctccgccgcgtcccacagctccgggtcccggccgatggt 1234 Query: 412 ccacacgttgatcaggacacgggcgcccttggg 444 |||||||||||| || || || ||||||||||| Sbjct: 1233 ccacacgttgatgagcacgcgcgcgcccttggg 1201
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||| ||| || ||| | || |||||| ||| ||||||| ||||||| Sbjct: 22362406 gaacctctccggcataaactcctccgccgcgtcccacagctccgggtcccggccgatggt 22362465 Query: 412 ccacacgttgatcaggacacgggcgcccttggg 444 |||||||||||| || || || ||||||||||| Sbjct: 22362466 ccacacgttgatgagcacgcgcgcgcccttggg 22362498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 |||| |||| ||||||| || ||||||||||| |||||||| |||| | |||||| ||| Sbjct: 22870215 ccggcgcacaccctccggccggacccgaacgggatgaactcgaacgtcttcccccagaaa 22870156 Query: 335 tccacctc 342 |||||||| Sbjct: 22870155 tccacctc 22870148 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 tgtccaagaacctctccggcatgaac 370 |||||||||||||||| ||||||||| Sbjct: 25126553 tgtccaagaacctctctggcatgaac 25126528 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 25102794 gaacctctccggcatgaactcctccggc 25102821
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||| ||| || ||| | || |||||| ||| ||||||| ||||||| Sbjct: 59389 gaacctctccggcataaactcctccgccgcgtcccacagctccgggtcccggccgatggt 59448 Query: 412 ccacacgttgatcaggacacgggcgcccttggg 444 |||||||||||| || || || ||||||||||| Sbjct: 59449 ccacacgttgatgagcacgcgcgcgcccttggg 59481
>ref|XM_466336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1657 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacgcc 322 |||||||||| |||||||||| || || ||| ||||||||||| |||||||||| || Sbjct: 1382 gccagcggcagcccggggcacagccgcctcccggacccgaacggcatgaactccacgtcc 1323 Query: 323 ctccccctgaagtcca 338 ||||||||||||||| Sbjct: 1322 ttccccctgaagtcca 1307
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacgcc 322 |||||||||| |||||||||| || || ||| ||||||||||| |||||||||| || Sbjct: 21761078 gccagcggcagcccggggcacagccgcctcccggacccgaacggcatgaactccacgtcc 21761019 Query: 323 ctccccctgaagtcca 338 ||||||||||||||| Sbjct: 21761018 ttccccctgaagtcca 21761003 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgttga 422 |||||||| | ||||| | |||||||||||||||||||| Sbjct: 17908323 cccacaccgccgggtcgcgcccgatggcccacacgttga 17908285 Score = 44.1 bits (22), Expect = 0.42 Identities = 64/78 (82%) Strand = Plus / Minus Query: 261 cggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacg 320 |||||| ||||| ||| |||||| || || ||| ||||||||||| |||||||||| Sbjct: 21711217 cggccaacggcagcccagggcacagccgcctcccggacccgaacggcatgaactccacgt 21711158 Query: 321 ccctccccctgaagtcca 338 || |||| |||||||||| Sbjct: 21711157 ccttccctctgaagtcca 21711140 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 gtccaagaacctctccggcatgaac 370 ||||| ||||||||||||||||||| Sbjct: 490196 gtccatgaacctctccggcatgaac 490172 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 |||||||||| ||| |||||| ||||| ||| ||||||||||| Sbjct: 21683374 gccagcggcagccccgggcacagcctcctcccggacccgaacgg 21683331
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacgcc 322 |||||||||| |||||||||| || || ||| ||||||||||| |||||||||| || Sbjct: 142475 gccagcggcagcccggggcacagccgcctcccggacccgaacggcatgaactccacgtcc 142416 Query: 323 ctccccctgaagtcca 338 ||||||||||||||| Sbjct: 142415 ttccccctgaagtcca 142400 Score = 44.1 bits (22), Expect = 0.42 Identities = 64/78 (82%) Strand = Plus / Minus Query: 261 cggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacg 320 |||||| ||||| ||| |||||| || || ||| ||||||||||| |||||||||| Sbjct: 92614 cggccaacggcagcccagggcacagccgcctcccggacccgaacggcatgaactccacgt 92555 Query: 321 ccctccccctgaagtcca 338 || |||| |||||||||| Sbjct: 92554 ccttccctctgaagtcca 92537 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 |||||||||| ||| |||||| ||||| ||| ||||||||||| Sbjct: 64771 gccagcggcagccccgggcacagcctcctcccggacccgaacgg 64728
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacgcc 322 |||||||||| |||||||||| || || ||| ||||||||||| |||||||||| || Sbjct: 53477 gccagcggcagcccggggcacagccgcctcccggacccgaacggcatgaactccacgtcc 53418 Query: 323 ctccccctgaagtcca 338 ||||||||||||||| Sbjct: 53417 ttccccctgaagtcca 53402 Score = 44.1 bits (22), Expect = 0.42 Identities = 64/78 (82%) Strand = Plus / Minus Query: 261 cggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacg 320 |||||| ||||| ||| |||||| || || ||| ||||||||||| |||||||||| Sbjct: 3616 cggccaacggcagcccagggcacagccgcctcccggacccgaacggcatgaactccacgt 3557 Query: 321 ccctccccctgaagtcca 338 || |||| |||||||||| Sbjct: 3556 ccttccctctgaagtcca 3539
>dbj|AK105913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H06, full insert sequence Length = 1657 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacgcc 322 |||||||||| |||||||||| || || ||| ||||||||||| |||||||||| || Sbjct: 1382 gccagcggcagcccggggcacagccgcctcccggacccgaacggcatgaactccacgtcc 1323 Query: 323 ctccccctgaagtcca 338 ||||||||||||||| Sbjct: 1322 ttccccctgaagtcca 1307
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 276 cggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||||||||||||||||| Sbjct: 704902 cggggcacgccctccgccccgacccgaacgg 704932 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 262 ggccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 |||||||| | | ||||||||||||||||| || | ||||||||| Sbjct: 22376116 ggccagcgccctgccggggcacgccctccggccggccccgaacgg 22376160 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 gtccacctccctgtccaagaacctctccggcatgaac 370 ||||||||| || | || ||||||||||||||||||| Sbjct: 7803272 gtccacctcgctctgcaggaacctctccggcatgaac 7803308 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacc 391 ||||||||||||||||||| | ||||||| |||||||| Sbjct: 31141593 gaacctctccggcatgaacttctccggctcctcccacacc 31141554
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 276 cggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||||||||||||||||| Sbjct: 704900 cggggcacgccctccgccccgacccgaacgg 704930 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 262 ggccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 |||||||| | | ||||||||||||||||| || | ||||||||| Sbjct: 22369145 ggccagcgccctgccggggcacgccctccggccggccccgaacgg 22369189 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 gtccacctccctgtccaagaacctctccggcatgaac 370 ||||||||| || | || ||||||||||||||||||| Sbjct: 7801107 gtccacctcgctctgcaggaacctctccggcatgaac 7801143 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacc 391 ||||||||||||||||||| | ||||||| |||||||| Sbjct: 31232116 gaacctctccggcatgaacttctccggctcctcccacacc 31232077
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 276 cggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||||||||||||||||| Sbjct: 447 cggggcacgccctccgccccgacccgaacgg 477
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 276 cggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||||||||||||||||| Sbjct: 90783 cggggcacgccctccgccccgacccgaacgg 90813
>ref|NM_193526.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaa 312 |||||||| |||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 1412 gccagcggaatcccggggcacagcctccgcccggacccgaacgggatgaa 1363
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaa 312 |||||||| |||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 21338651 gccagcggaatcccggggcacagcctccgcccggacccgaacgggatgaa 21338700 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 31212240 cacgccctccgccccgaccc 31212221 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ccgatggcccacacgttgat 423 |||||||||||||||||||| Sbjct: 7054837 ccgatggcccacacgttgat 7054818
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaa 312 |||||||| |||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 60589 gccagcggaatcccggggcacagcctccgcccggacccgaacgggatgaa 60638
>dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F12, full insert sequence Length = 1939 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaa 312 |||||||| |||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 1527 gccagcggaatcccggggcacagcctccgcccggacccgaacgggatgaa 1478
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 ||||||||| ||||||||||||||||||||| | |||| | || || ||||||||||| Sbjct: 17519943 ccggggcacagcctccgccccgacccgaacgggaggaacccgaagtccttccccctgaag 17520002 Query: 335 tccacctcc 343 |||| |||| Sbjct: 17520003 tccatctcc 17520011 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 264 ccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 ||||| ||||||| ||||||| || |||||| ||||||||||| Sbjct: 13993920 ccagctgcatccccgggcacgaccgccgcccggacccgaacgg 13993962 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 397 gtccctcccgatggcccacacgttgatca 425 |||||||||||| |||||| ||||||||| Sbjct: 8887204 gtccctcccgatcgcccacgcgttgatca 8887232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 5833679 cacgccctccgccccgaccc 5833660
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 ||||||||| ||||||||||||||||||||| | |||| | || || ||||||||||| Sbjct: 150984 ccggggcacagcctccgccccgacccgaacgggaggaacccgaagtccttccccctgaag 151043 Query: 335 tccacctcc 343 |||| |||| Sbjct: 151044 tccatctcc 151052
>dbj|AP005472.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075M17 Length = 91422 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 ||||||||| ||||||||||||||||||||| | |||| | || || ||||||||||| Sbjct: 24389 ccggggcacagcctccgccccgacccgaacgggaggaacccgaagtccttccccctgaag 24448 Query: 335 tccacctcc 343 |||| |||| Sbjct: 24449 tccatctcc 24457
>dbj|AK106229.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A12, full insert sequence Length = 1679 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 ||||||||| ||||||||||||||||||||| | |||| | || || ||||||||||| Sbjct: 1402 ccggggcacagcctccgccccgacccgaacgggaggaacccgaagtccttccccctgaag 1343 Query: 335 tccacctcc 343 |||| |||| Sbjct: 1342 tccatctcc 1334
>ref|XM_482839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 |||| |||| ||||||| || ||||||||||| |||||||| |||| | |||||| ||| Sbjct: 1358 ccggcgcacaccctccggccggacccgaacgggatgaactcgaacgtcttcccccagaaa 1299 Query: 335 tccacctc 342 |||||||| Sbjct: 1298 tccacctc 1291
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 |||| |||| ||||||| || ||||||||||| |||||||| |||| | |||||| ||| Sbjct: 44053 ccggcgcacaccctccggccggacccgaacgggatgaactcgaacgtcttcccccagaaa 43994 Query: 335 tccacctc 342 |||||||| Sbjct: 43993 tccacctc 43986
>dbj|AK072861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141H24, full insert sequence Length = 1693 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacggtatgaactccaacgccctccccctgaag 334 |||| |||| ||||||| || ||||||||||| |||||||| |||| | |||||| ||| Sbjct: 1357 ccggcgcacaccctccggccggacccgaacgggatgaactcgaacgtcttcccccagaaa 1298 Query: 335 tccacctc 342 |||||||| Sbjct: 1297 tccacctc 1290
>gb|AY596977.1| Hypericum androsaemum cytochrome P450 mRNA, complete cds Length = 1497 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgttga 422 |||||||||| |||||||| || |||||||||||||||| Sbjct: 1219 cccacacctcagggtccctacccatggcccacacgttga 1181
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||||||| || ||||| || |||||| || |||||| | ||||||| Sbjct: 23806 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtcgcggccgatggt 23747 Query: 412 ccacacg 418 ||||||| Sbjct: 23746 ccacacg 23740 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtc 399 ||||||||||||||||||| || ||||| || |||||| || |||||| Sbjct: 30087 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtc 30040
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||||||| || ||||| || |||||| || |||||| | ||||||| Sbjct: 151775 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtcgcggccgatggt 151716 Query: 412 ccacacg 418 ||||||| Sbjct: 151715 ccacacg 151709 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtc 399 ||||||||||||||||||| || ||||| || |||||| || |||||| Sbjct: 158056 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtc 158009 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 123683 gaacctctccggcatgaactcctccggc 123710
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1531_B07 Length = 115245 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccga 407 ||||||||| ||||||| |||| || ||||| | ||||| || ||||||||||||||| Sbjct: 102434 ccaagaaccgctccggccggaactcctccggcgagccccacgccgcggggtccctcccga 102375 Query: 408 tggcccacacgttga 422 | |||||| |||||| Sbjct: 102374 tcgcccacgcgttga 102360 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 395 gggtccctcccgatggcccacacgttgat 423 |||||||||||||| |||||||||||||| Sbjct: 97270 gggtccctcccgatcgcccacacgttgat 97242 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 cggctcggcccacacctcggggtc 399 ||||||||||||||| |||||||| Sbjct: 19580 cggctcggcccacacgtcggggtc 19557
>dbj|AK120674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161I12, full insert sequence Length = 1763 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccga 407 ||||||||| ||||||| |||| || ||||| | ||||| || ||||||||||||||| Sbjct: 1307 ccaagaaccgctccggccggaactcctccggcgagccccacgccgcggggtccctcccga 1248 Query: 408 tggcccacacgttga 422 | |||||| |||||| Sbjct: 1247 tcgcccacgcgttga 1233
>dbj|AK120444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099E24, full insert sequence Length = 1765 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccga 407 ||||||||| ||||||| |||| || ||||| | ||||| || ||||||||||||||| Sbjct: 1309 ccaagaaccgctccggccggaactcctccggcgagccccacgccgcggggtccctcccga 1250 Query: 408 tggcccacacgttga 422 | |||||| |||||| Sbjct: 1249 tcgcccacgcgttga 1235
>dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D15, full insert sequence Length = 1825 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||||||| || ||||| || |||||| || |||||| | ||||||| Sbjct: 1347 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtcgcggccgatggt 1288 Query: 412 ccacacg 418 ||||||| Sbjct: 1287 ccacacg 1281
>dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F15, full insert sequence Length = 3587 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacctcggggtccctcccgatggc 411 ||||||||||||||||||| || ||||| || |||||| || |||||| | ||||||| Sbjct: 3110 gaacctctccggcatgaactcctccggcgcgtcccacagcttggggtcgcggccgatggt 3051 Query: 412 ccacacg 418 ||||||| Sbjct: 3050 ccacacg 3044
>gb|AY850934.1| Broussonetia papyrifera ferulate-5-hydroxylase (F5H) gene, complete cds Length = 2202 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 270 gcatcccggggcacgccctccgccccgacccgaacggtatgaactc 315 ||||||||||||| | |||||| |||||||| ||||| |||||||| Sbjct: 2022 gcatcccggggcaggacctccgacccgacccaaacgggatgaactc 1977
>gb|AY850933.1| Broussonetia papyrifera ferulate-5-hydroxylase (F5H) mRNA, complete cds Length = 1685 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 270 gcatcccggggcacgccctccgccccgacccgaacggtatgaactc 315 ||||||||||||| | |||||| |||||||| ||||| |||||||| Sbjct: 1470 gcatcccggggcaggacctccgacccgacccaaacgggatgaactc 1425
>ref|NM_197341.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBa0026L12.6), mRNA Length = 1539 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 gtccaagaacctctccggcatgaac 370 ||||||||||||||||||||||||| Sbjct: 1287 gtccaagaacctctccggcatgaac 1263
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 gtccaagaacctctccggcatgaac 370 ||||||||||||||||||||||||| Sbjct: 38659 gtccaagaacctctccggcatgaac 38635
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 346 gtccaagaacctctccggcatgaac 370 ||||||||||||||||||||||||| Sbjct: 19337722 gtccaagaacctctccggcatgaac 19337746 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 405 cgatggcccacacgttgatcaggacacgggcgcccttgggcaccgagaagccg 457 |||||||||||||||||| || ||| |||| |||| |||| || ||| ||||| Sbjct: 19209816 cgatggcccacacgttgaccatgacgcgggagcccctggggacggagtagccg 19209868
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 346 gtccaagaacctctccggcatgaac 370 ||||||||||||||||||||||||| Sbjct: 19348998 gtccaagaacctctccggcatgaac 19349022 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 405 cgatggcccacacgttgatcaggacacgggcgcccttgggcaccgagaagccg 457 |||||||||||||||||| || ||| |||| |||| |||| || ||| ||||| Sbjct: 19221092 cgatggcccacacgttgaccatgacgcgggagcccctggggacggagtagccg 19221144
>gb|AF321860.1|AF321860 Lolium rigidum clone Lol-20-f putative cytochrome P450 mRNA, complete cds Length = 1782 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 394 ggggtccctcccgatggcccacacgttgatca 425 |||||||| ||||||||||||| ||||||||| Sbjct: 1279 ggggtcccgcccgatggcccacgcgttgatca 1248
>gb|AY104083.1| Zea mays PCO090231 mRNA sequence Length = 1749 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 395 gggtccctcccgatggcccacacgttga 422 ||||||| |||||||||||||||||||| Sbjct: 1222 gggtcccgcccgatggcccacacgttga 1195
>ref|XM_475110.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1608 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaac 370 ||||||||||||||||||||||| Sbjct: 1321 ccaagaacctctccggcatgaac 1299
>ref|XM_465852.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgttga 422 |||||||| | ||||| | |||||||||||||||||||| Sbjct: 1297 cccacaccgccgggtcgcgcccgatggcccacacgttga 1259
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaac 370 ||||||||||||||||||||||| Sbjct: 3716 ccaagaacctctccggcatgaac 3694
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaac 370 ||||||||||||||||||||||| Sbjct: 52948 ccaagaacctctccggcatgaac 52926
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 348 ccaagaacctctccggcatgaac 370 ||||||||||||||||||||||| Sbjct: 17059581 ccaagaacctctccggcatgaac 17059559 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 397 gtccctcccgatggcccacacgttgatca 425 |||||||||||| |||||| ||||||||| Sbjct: 25344309 gtccctcccgatcgcccacgcgttgatca 25344281 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 385 ccacacctcggggtccctcccgatggcccacacgtt 420 |||||||| ||||||||| |||| ||||||||||| Sbjct: 24129335 ccacaccttggggtccctggcgatcgcccacacgtt 24129300
>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031J07 Length = 172511 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 264 ccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 ||||| ||||||| ||||||| || |||||| ||||||||||| Sbjct: 111140 ccagctgcatccccgggcacgaccgccgcccggacccgaacgg 111182
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgttga 422 |||||||| | ||||| | |||||||||||||||||||| Sbjct: 42956 cccacaccgccgggtcgcgcccgatggcccacacgttga 42918
>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654A08 Length = 154812 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgttga 422 |||||||| | ||||| | |||||||||||||||||||| Sbjct: 147854 cccacaccgccgggtcgcgcccgatggcccacacgttga 147816
>dbj|AB012925.1| Torenia hybrida mRNA for flavonoid 3',5'-hydroxylase, complete cds Length = 1766 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggccca 414 |||||||||| ||||| |||||||||||||| Sbjct: 1364 cccacacctcagggtctctcccgatggccca 1334
>ref|XM_507287.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0064I19.10 mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 tgtccaagaacctctccggcatgaac 370 |||||||||||||||| ||||||||| Sbjct: 1182 tgtccaagaacctctctggcatgaac 1157
>ref|XM_483262.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1735 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 tgtccaagaacctctccggcatgaac 370 |||||||||||||||| ||||||||| Sbjct: 1311 tgtccaagaacctctctggcatgaac 1286
>ref|XM_466327.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.42 Identities = 64/78 (82%) Strand = Plus / Minus Query: 261 cggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacg 320 |||||| ||||| ||| |||||| || || ||| ||||||||||| |||||||||| Sbjct: 1448 cggccaacggcagcccagggcacagccgcctcccggacccgaacggcatgaactccacgt 1389 Query: 321 ccctccccctgaagtcca 338 || |||| |||||||||| Sbjct: 1388 ccttccctctgaagtcca 1371
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 136 aacggcgagctctagcgcggcgccaa 161 |||||||||||||| ||||||||||| Sbjct: 3543891 aacggcgagctctatcgcggcgccaa 3543866
>gb|AF321859.1|AF321859 Lolium rigidum clone Lol-20-d putative cytochrome P450 mRNA, complete cds Length = 1906 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 394 ggggtccctcccgatggcccacacgttgat 423 |||||||| ||||||||||||| ||||||| Sbjct: 1297 ggggtcccgcccgatggcccacgcgttgat 1268
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 tgtccaagaacctctccggcatgaac 370 |||||||||||||||| ||||||||| Sbjct: 30728 tgtccaagaacctctctggcatgaac 30703 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 6969 gaacctctccggcatgaactcctccggc 6996
>dbj|AK099637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059L23, full insert sequence Length = 1752 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 tgtccaagaacctctccggcatgaac 370 |||||||||||||||| ||||||||| Sbjct: 1182 tgtccaagaacctctctggcatgaac 1157
>dbj|AK069701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027B10, full insert sequence Length = 1737 Score = 44.1 bits (22), Expect = 0.42 Identities = 64/78 (82%) Strand = Plus / Minus Query: 261 cggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacg 320 |||||| ||||| ||| |||||| || || ||| ||||||||||| |||||||||| Sbjct: 1448 cggccaacggcagcccagggcacagccgcctcccggacccgaacggcatgaactccacgt 1389 Query: 321 ccctccccctgaagtcca 338 || |||| |||||||||| Sbjct: 1388 ccttccctctgaagtcca 1371
>dbj|AK067905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124B09, full insert sequence Length = 1991 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 345 tgtccaagaacctctccggcatgaac 370 |||||||||||||||| ||||||||| Sbjct: 1567 tgtccaagaacctctctggcatgaac 1542
>dbj|AK060722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F11, full insert sequence Length = 1383 Score = 44.1 bits (22), Expect = 0.42 Identities = 64/78 (82%) Strand = Plus / Minus Query: 261 cggccagcggcatcccggggcacgccctccgccccgacccgaacggtatgaactccaacg 320 |||||| ||||| ||| |||||| || || ||| ||||||||||| |||||||||| Sbjct: 1022 cggccaacggcagcccagggcacagccgcctcccggacccgaacggcatgaactccacgt 963 Query: 321 ccctccccctgaagtcca 338 || |||| |||||||||| Sbjct: 962 ccttccctctgaagtcca 945
>ref|XM_471136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 278 gggcacgccctccgccccgacccgaacgg 306 ||||||| ||||||||||| ||||||||| Sbjct: 1277 gggcacgacctccgccccgccccgaacgg 1249
>ref|XM_470946.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 cccgatggcccacacgttgat 423 ||||||||||||||||||||| Sbjct: 1176 cccgatggcccacacgttgat 1156
>ref|NM_197316.1| Oryza sativa (japonica cultivar-group) putative ferulate-5-hydroxylase (OSJNBa0055O03.14), mRNA Length = 630 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 405 cgatggcccacacgttgatcaggacacgggcgcccttgggcaccgagaagccg 457 |||||||||||||||||| || ||| |||| |||| |||| || ||| ||||| Sbjct: 298 cgatggcccacacgttgaccatgacgcgggagcccctggggacggagtagccg 246
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 397 gtccctcccgatggcccacacgttgatca 425 |||||||||||| |||||| ||||||||| Sbjct: 78913 gtccctcccgatcgcccacgcgttgatca 78885
>gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic sequence, complete sequence Length = 73070 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Minus Query: 262 ggccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 |||||||| | | ||||||||||||||||| || | ||||||||| Sbjct: 36328 ggccagcgccctgccggggcacgccctccggccggccccgaacgg 36284
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 405 cgatggcccacacgttgatcaggacacgggcgcccttgggcaccgagaagccg 457 |||||||||||||||||| || ||| |||| |||| |||| || ||| ||||| Sbjct: 62160 cgatggcccacacgttgaccatgacgcgggagcccctggggacggagtagccg 62212
>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete sequence Length = 149449 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 gggcacgccctccgccccgacccgaacgg 306 ||||||| ||||||||||| ||||||||| Sbjct: 110153 gggcacgacctccgccccgccccgaacgg 110181
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 cccgatggcccacacgttgat 423 ||||||||||||||||||||| Sbjct: 90838 cccgatggcccacacgttgat 90858
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 gggcacgccctccgccccgacccgaacgg 306 ||||||| ||||||||||| ||||||||| Sbjct: 62468 gggcacgacctccgccccgccccgaacgg 62496
>dbj|AB213605.1| Vitis vinifera VvF3'h4 gene for flavonoid 3'-hydroxylase, complete cds Length = 2421 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgtt 420 |||||||||| ||||||| | | |||||||||||||| Sbjct: 1924 cccacacctctgggtcccgcgctatggcccacacgtt 1888
>dbj|AB213604.1| Vitis vinifera VvF3'h3 gene for flavonoid 3'-hydroxylase, complete cds Length = 2819 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgtt 420 |||||||||| ||||||| | | |||||||||||||| Sbjct: 2332 cccacacctctgggtcccgcgctatggcccacacgtt 2296
>dbj|AB213602.1| Vitis vinifera VvF3'h1 gene for flavonoid 3'-hydroxylase, complete cds Length = 2547 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgtt 420 |||||||||| ||||||| | | |||||||||||||| Sbjct: 1796 cccacacctctgggtcccgcgctatggcccacacgtt 1760
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 gggcacgccctccgccccgacccgaacgg 306 ||||||| ||||||||||| ||||||||| Sbjct: 1767201 gggcacgacctccgccccgccccgaacgg 1767229 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 cccgatggcccacacgttgat 423 ||||||||||||||||||||| Sbjct: 90838 cccgatggcccacacgttgat 90858
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017C12 Length = 135356 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 gtccaagaacctctccggcatgaac 370 ||||| ||||||||||||||||||| Sbjct: 86437 gtccatgaacctctccggcatgaac 86413
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 397 gtccctcccgatggcccacacgttgatca 425 |||||||||||| |||||| ||||||||| Sbjct: 52833 gtccctcccgatcgcccacgcgttgatca 52861
>dbj|AK105745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B05, full insert sequence Length = 1734 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 cccgatggcccacacgttgat 423 ||||||||||||||||||||| Sbjct: 1235 cccgatggcccacacgttgat 1215
>dbj|AK100972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143C19, full insert sequence Length = 1738 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 cccgatggcccacacgttgat 423 ||||||||||||||||||||| Sbjct: 1237 cccgatggcccacacgttgat 1217
>dbj|AK099951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123G02, full insert sequence Length = 1700 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 gtccaagaacctctccggcatgaac 370 ||||| ||||||||||||||||||| Sbjct: 1285 gtccatgaacctctccggcatgaac 1261
>dbj|AK070050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040I08, full insert sequence Length = 1583 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 334 gtccacctccctgtccaagaacctctccggcatgaac 370 ||||||||| || | || ||||||||||||||||||| Sbjct: 1262 gtccacctcgctctgcaggaacctctccggcatgaac 1226
>dbj|AK067847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124D03, full insert sequence Length = 2090 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 405 cgatggcccacacgttgatcaggacacgggcgcccttgggcaccgagaagccg 457 |||||||||||||||||| || ||| |||| |||| |||| || ||| ||||| Sbjct: 1385 cgatggcccacacgttgaccatgacgcgggagcccctggggacggagtagccg 1333
>dbj|AK062293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F01, full insert sequence Length = 2395 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 397 gtccctcccgatggcccacacgttgatca 425 |||||||||||| |||||| ||||||||| Sbjct: 1315 gtccctcccgatcgcccacgcgttgatca 1287
>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete sequence Length = 72636 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 cccgatggcccacacgttgat 423 ||||||||||||||||||||| Sbjct: 37569 cccgatggcccacacgttgat 37589
>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06, complete sequence Length = 145517 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 cccgatggcccacacgttgat 423 ||||||||||||||||||||| Sbjct: 22087 cccgatggcccacacgttgat 22107
>emb|AJ880357.1| Vitis vinifera mRNA for flavonoid-3'-hydroxylase Length = 1733 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 384 cccacacctcggggtccctcccgatggcccacacgtt 420 |||||||||| ||||||| | | |||||||||||||| Sbjct: 1236 cccacacctctgggtcccgcgctatggcccacacgtt 1200
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 334 gtccacctccctgtccaagaacctctccggcatgaac 370 ||||||||| || | || ||||||||||||||||||| Sbjct: 50860 gtccacctcgctctgcaggaacctctccggcatgaac 50824
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2264954 tgccaacaccatcggcacga 2264973
>ref|NM_188578.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1737 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ccgatggcccacacgttgat 423 |||||||||||||||||||| Sbjct: 1385 ccgatggcccacacgttgat 1366
>ref|XM_483259.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1518 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 1257 gaacctctccggcatgaactcctccggc 1230
>ref|XM_469850.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2199 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacc 391 ||||||||||||||||||| | ||||||| |||||||| Sbjct: 1941 gaacctctccggcatgaacttctccggctcctcccacacc 1902
>ref|XM_466323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1669 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 |||||||||| ||| |||||| ||||| ||| ||||||||||| Sbjct: 1374 gccagcggcagccccgggcacagcctcctcccggacccgaacgg 1331
>ref|XM_477917.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||| || | ||||||||| Sbjct: 1362 ccggggcacgccctccggcctgccccgaacgg 1331
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 ccgagaagccgcccagcgtc 466 |||||||||||||||||||| Sbjct: 1097569 ccgagaagccgcccagcgtc 1097550
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 385 ccacacctcggggtccctcccgatggcccacacgtt 420 |||||||| ||||||||| |||| ||||||||||| Sbjct: 15574 ccacaccttggggtccctggcgatcgcccacacgtt 15539
>gb|AY526610.1| Salmonella enterica subsp. enterica serovar Gallinarum outer membrane protein A (ompA) gene, partial cds Length = 957 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 445 gatgccaacaccatcggcac 464
>ref|XM_417956.1| PREDICTED: Gallus gallus similar to phosphoinositide-3-kinase, class 2, beta polypeptide; PI3K-C2beta; phosphatidylinositol 3-kinase C2 domain-containing beta polypeptide; PTDINS-3-kinase C2 beta (LOC419822), mRNA Length = 5994 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 aactccaacgccctccccctgaag 334 |||||||||||| ||||||||||| Sbjct: 2905 aactccaacgccgtccccctgaag 2928
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2534089 tgccaacaccatcggcacga 2534108
>emb|X62529.1|ECGALS5 Escherichia coli galS gene for hypothetical hydrophobic transport protein 5' end Length = 1990 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 52 tgccaacaccatcggcacga 33
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2383604 tgccaacaccatcggcacga 2383623
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2240416 tgccaacaccatcggcacga 2240435
>gb|AE008746.1| Salmonella typhimurium LT2, section 50 of 220 of the complete genome Length = 22288 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 14721 gatgccaacaccatcggcac 14702
>emb|X02006.1|STOMPA Salmonella typhimurium ompA gene for outer membrane protein Length = 1400 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 720 gatgccaacaccatcggcac 739
>emb|AL935255.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 4/11 Length = 269050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 atcggcacgaccgtcacggc 264 |||||||||||||||||||| Sbjct: 230129 atcggcacgaccgtcacggc 230110
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2245728 tgccaacaccatcggcacga 2245747
>emb|BX571950.6| Zebrafish DNA sequence from clone CH211-198P7 in linkage group 12, complete sequence Length = 196442 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gtgcatttaaccagtaataa 62 |||||||||||||||||||| Sbjct: 45937 gtgcatttaaccagtaataa 45956
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacc 391 ||||||||||||||||||| | ||||||| |||||||| Sbjct: 62234 gaacctctccggcatgaacttctccggctcctcccacacc 62195
>gb|AF488521.1| Oryza sativa Cyt-P450 monooxygenase (PM-I) mRNA, complete cds Length = 1666 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 1287 gaacctctccggcatgaactcctccggc 1260
>emb|CR387615.1| Gallus gallus finished cDNA, clone ChEST49o7 Length = 1892 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 aactccaacgccctccccctgaag 334 |||||||||||| ||||||||||| Sbjct: 997 aactccaacgccgtccccctgaag 1020
>gb|U00007.1|ECOHU47 47 to 48 centisome region of E.coli K12 BHB2600 Length = 75888 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 50139 tgccaacaccatcggcacga 50158
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 24460047 cacgccctccgccccgaccc 24460028
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||| || | ||||||||| Sbjct: 15508123 ccggggcacgccctccggcctgccccgaacgg 15508092
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 138585 cacgccctccgccccgaccc 138566
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ccatcggcacgaccgtcacg 262 |||||||||||||||||||| Sbjct: 3341884 ccatcggcacgaccgtcacg 3341865
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2244410 tgccaacaccatcggcacga 2244429
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ccgatggcccacacgttgat 423 |||||||||||||||||||| Sbjct: 42417 ccgatggcccacacgttgat 42398
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 1836825 gatgccaacaccatcggcac 1836844
>gb|DQ341412.1| Oryza sativa (indica cultivar-group) bentazon and sulfonylurea-resistant protein (Bel) gene, promoter region and complete cds Length = 4187 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacc 391 ||||||||||||||||||| | ||||||| |||||||| Sbjct: 3369 gaacctctccggcatgaacttctccggctcctcccacacc 3330
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 149208 cacgccctccgccccgaccc 149189
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 34454 cacgccctccgccccgaccc 34435
>dbj|AP005252.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0015I22 Length = 121190 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||| || | ||||||||| Sbjct: 106187 ccggggcacgccctccggcctgccccgaacgg 106156
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 158910 gaacctctccggcatgaactcctccggc 158937
>gb|AF234270.1|AF234270 Salmonella typhimurium outer membrane protein A (ompA) gene, partial cds Length = 746 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 520 gatgccaacaccatcggcac 539
>dbj|AP005737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062P14 Length = 168223 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||| || | ||||||||| Sbjct: 26606 ccggggcacgccctccggcctgccccgaacgg 26575
>dbj|AK111468.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-D12, full insert sequence Length = 1605 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 275 ccggggcacgccctccgccccgacccgaacgg 306 ||||||||||||||||| || | ||||||||| Sbjct: 1362 ccggggcacgccctccggcctgccccgaacgg 1331
>dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E07, full insert sequence Length = 1865 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggc 379 ||||||||||||||||||| || ||||| Sbjct: 1371 gaacctctccggcatgaactcctccggc 1344
>dbj|AK104825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F09, full insert sequence Length = 1860 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacc 391 ||||||||||||||||||| | ||||||| |||||||| Sbjct: 1336 gaacctctccggcatgaacttctccggctcctcccacacc 1297
>dbj|AK066760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075G04, full insert sequence Length = 1867 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 352 gaacctctccggcatgaacacccccggctcggcccacacc 391 ||||||||||||||||||| | ||||||| |||||||| Sbjct: 1337 gaacctctccggcatgaacttctccggctcctcccacacc 1298
>dbj|AK059010.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H10, full insert sequence Length = 1669 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 263 gccagcggcatcccggggcacgccctccgccccgacccgaacgg 306 |||||||||| ||| |||||| ||||| ||| ||||||||||| Sbjct: 1374 gccagcggcagccccgggcacagcctcctcccggacccgaacgg 1331
>gb|AY746962.1| Salmonella sp. CDC 156-87 OmpA (ompA) gene, partial cds Length = 680 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 208 gatgccaacaccatcggcac 227
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 1910277 gatgccaacaccatcggcac 1910296
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 1142112 gatgccaacaccatcggcac 1142093
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 24388253 cacgccctccgccccgaccc 24388234
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cacgccctccgccccgaccc 300 |||||||||||||||||||| Sbjct: 31078 cacgccctccgccccgaccc 31059
>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 5/20 Length = 254050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gatgccaacaccatcggcac 252 |||||||||||||||||||| Sbjct: 17536 gatgccaacaccatcggcac 17517
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 1930102 tgccaacaccatcggcacga 1930083
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2153053 tgccaacaccatcggcacga 2153034
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tgccaacaccatcggcacga 254 |||||||||||||||||||| Sbjct: 2315212 tgccaacaccatcggcacga 2315231 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,588,200 Number of Sequences: 3902068 Number of extensions: 2588200 Number of successful extensions: 47001 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45754 Number of HSP's gapped (non-prelim): 1247 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
