>JI60_HORVU (Q00531) 60 kDa jasmonate-induced protein (EC 3.2.2.22) (rRNA|
           N-glycosidase)
          Length = 560

 Score =  244 bits (624), Expect = 8e-65
 Identities = 121/121 (100%), Positives = 121/121 (100%)
 Frame = -3

Query: 527 VQGRVDVKLAGLQSRDEVVLVGRIVARSKLFDFGCVLFYNEAAGVRVRPGELVPLARHAL 348
           VQGRVDVKLAGLQSRDEVVLVGRIVARSKLFDFGCVLFYNEAAGVRVRPGELVPLARHAL
Sbjct: 440 VQGRVDVKLAGLQSRDEVVLVGRIVARSKLFDFGCVLFYNEAAGVRVRPGELVPLARHAL 499

Query: 347 AVPLHMPLTIELDIRHGGSGDEIVRGELEFKTAIDGLHTGRLVGVNDAEFEVTILWSEYP 168
           AVPLHMPLTIELDIRHGGSGDEIVRGELEFKTAIDGLHTGRLVGVNDAEFEVTILWSEYP
Sbjct: 500 AVPLHMPLTIELDIRHGGSGDEIVRGELEFKTAIDGLHTGRLVGVNDAEFEVTILWSEYP 559

Query: 167 W 165
           W
Sbjct: 560 W 560

>MUC4_HUMAN (Q99102) Mucin-4 (Tracheobronchial mucin) (Fragment)|
          Length = 610

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
 Frame = +1

Query: 193 TSNSASLTPTRRPVWRPSMAVLNSSSPLTIXXXXXXXXXXXX--IVSGMCSGTASACLAK 366
           TS++++   T  PV   S A    ++PL +              +V+   S +       
Sbjct: 465 TSSASTSHATSLPVTDTSSASTGHATPLPVTDTSSASTGHATPLLVTDTSSASTGHTTPL 524

Query: 367 GTSSPGRTRTPAASL*KSTQPKSNSLLRATILPTRTTSS 483
             +SP    T  A+    T P S S   AT LP   TSS
Sbjct: 525 HVTSPSSASTGHATPLPVTSPSSASTSHATSLPVTDTSS 563

>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2|
          Length = 306

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 26/97 (26%), Positives = 37/97 (38%)
 Frame = +1

Query: 211 LTPTRRPVWRPSMAVLNSSSPLTIXXXXXXXXXXXXIVSGMCSGTASACLAKGTSSPGRT 390
           L P  RP  R   A L S  P+T               +  C+G    C A   ++P   
Sbjct: 132 LEPRARPSGRTPPAQLRSPWPMTAAGPASRARASETGSTASCAGRWRTCCA-AAAAPSAA 190

Query: 391 RTPAASL*KSTQPKSNSLLRATILPTRTTSSRDCRPA 501
           R+ +A   +ST    +S  RA   P+ T  +    PA
Sbjct: 191 RSASARTGRST----SSCARAARAPSATEGALTRTPA 223

>TNAP3_HUMAN (P21580) Tumor necrosis factor, alpha-induced protein 3 (EC|
           3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger
           protein A20)
          Length = 790

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
 Frame = +2

Query: 359 SPRGPAPQVARALQRPRCRRAHSRNRTACCEQR---SCRREPLRLGTAGQQASHRP 517
           S R   P+  ++  RP+C RA  +N  AC  +     C+    R+G    +    P
Sbjct: 699 SQRRDVPRTTQSTSRPKCARASCKNILACRSEELCMECQHPNQRMGPGAHRGEPAP 754

>PAP2_YEAST (P53632) Poly(A) RNA polymerase protein 2 (EC 2.7.7.-) (DNA|
           polymerase sigma) (DNA polymerase kappa) (Topoisomerase
           1-related protein TRF4)
          Length = 584

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +3

Query: 306 NVKLNRERHVQRHGKRMPRQGDQLPRSHAHSSGLVVEEHTAEIEQ 440
           ++ LN E  V+    R  ++ ++LP+ H  + G++V EH ++ ++
Sbjct: 37  SISLNDENEVEILPSRNEQETNKLPKDHVTADGILVLEHKSDDDE 81

>YHCR_BACSU (P54602) Endonuclease yhcR precursor (EC 3.1.31.-)|
          Length = 1217

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 18/94 (19%)
 Frame = -3

Query: 416  FYNEAAGVRVRPGELVPLARHALAVPLHMPLT------------------IELDIRHGGS 291
            F +EA  V     EL      A+AV  HM                      E+D+     
Sbjct: 765  FTDEATAVNKAAEELKKKGVKAIAVLAHMSAEQNGNAITGESADLANKTDSEIDVIFAAH 824

Query: 290  GDEIVRGELEFKTAIDGLHTGRLVGVNDAEFEVT 189
              ++V GE+  K  +     G+ +GV D E + T
Sbjct: 825  NHQVVNGEVNGKLIVQAFEYGKAIGVVDVEIDKT 858

>TNAP3_MACFA (Q4R8W3) Tumor necrosis factor, alpha-induced protein 3 (EC|
           3.-.-.-)
          Length = 790

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 359 SPRGPAPQVARALQRPRCRRAHSRNRTACCEQRSC 463
           S R   P+  ++  RP+C RA  +N  AC  +  C
Sbjct: 699 SQRRDVPRTTQSTSRPKCARASCKNILACRSEELC 733

>EXT2_HUMAN (Q93063) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)|
           (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N-
           acetylglucosaminyl-proteoglycan
           4-alpha-N-acetylglucosaminyltransferase) (Putative tumor
           suppressor protein EXT2) (Multiple exostoses protein
          Length = 718

 Score = 25.8 bits (55), Expect(2) = 5.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 175 STLGRHPCERADYYQLQILYGTQYELKNKCLSLT 74
           S +G HP  R D   LQ+ +G    + +KC +L+
Sbjct: 257 SQVGLHPEYREDLEALQVKHGESVLVLDKCTNLS 290



 Score = 22.3 bits (46), Expect(2) = 5.2
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 350 LAVPLHMPLTIELDIRHGGSG 288
           +++P++ PL+ E+D+   G G
Sbjct: 228 VSIPVYSPLSAEVDLPEKGPG 248

>TRZA_RHOCO (Q52725) S-triazine hydrolase (EC 3.8.1.-) (N-ethylammeline|
           chlorohydrolase)
          Length = 476

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 343 TASACLAKGTSSPGRTRTPAASL*KSTQPKSNSLLRATILPTRTTSSRDCRPASFTSTRP 522
           T+++   K ++ PG   +PA+S    T  KS+S     + P   TSS  C   S  ++ P
Sbjct: 40  TSTSAAPKSSTPPGWQCSPASSTPTPTSHKSSS---GVVHPMTATSSNGCTTCSIPASLP 96

>CDAS_THEET (P29964) Cyclomaltodextrinase (EC 3.2.1.54) (CDase)|
           (Cyclomaltodextrin hydrolase, decycling)
          Length = 574

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = -1

Query: 142 DYYQLQILYGTQYE----LKNKCLSLTHTNLYFLIYL**IKANKTYIYMF 5
           D  ++ +LY  +Y+     K K + LTHTN  F  Y   ++ NK ++Y F
Sbjct: 33  DVDRVYVLYKDRYDWLGKFKIKPMVLTHTNELFDYYETTLELNKKFVYFF 82

>2A5D_YEAST (P38903) Serine/threonine-protein phosphatase 2A 56 kDa regulatory|
           subunit delta isoform (PP2A, B subunit, B' delta
           isoform) (Protein RTS1) (Protein SCS1)
          Length = 757

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 24/91 (26%), Positives = 38/91 (41%)
 Frame = +1

Query: 250 AVLNSSSPLTIXXXXXXXXXXXXIVSGMCSGTASACLAKGTSSPGRTRTPAASL*KSTQP 429
           A  +SSS  T                G  SG+  +     +SS  +T+T       S+  
Sbjct: 45  ASASSSSHGTTHSSASSTGSKSTTEKGKQSGSVPSQGKHHSSSTSKTKTATTPSSSSSSS 104

Query: 430 KSNSLLRATILPTRTTSSRDCRPASFTSTRP 522
           +S+S+ R+    T+ TSSR  +  S  S +P
Sbjct: 105 RSSSVSRSGSSSTKKTSSRKGQEQSKQSQQP 135

>MUTS_BACAN (Q81WR3) DNA mismatch repair protein mutS|
          Length = 892

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 405 LVVEEHTAEIEQLAASNDPADENHFVSGLQASKLHIDPALD 527
           +VV+E   EIE+    N+   +  F    Q+SK    PALD
Sbjct: 815 IVVKEEPIEIEETKVDNEEESQLSFFGAEQSSKKQDKPALD 855

>IE63_EBV (Q04360) Transcriptional regulator IE63 homolog (Diffuse early|
           antigen)
          Length = 438

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 359 SPRGP-APQVARALQRPRCRRAHSRNRTACCEQRSCRREPLRLGTAGQQASHRP 517
           +PR P AP+V RA + PR  R++   R    E R   R   +   A Q+ S RP
Sbjct: 112 APRAPRAPRVPRAPRSPRAPRSNRATRGPRSESRGAGRSTRK--QARQERSQRP 163

>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
 Frame = +1

Query: 190  VTSNSASLTP-------TRRPVWRPSMAVLNSSSPLTIXXXXXXXXXXXXIVSGMCSGTA 348
            +TS++ S TP       +  PV  PS +   SSS                  S   + T+
Sbjct: 818  ITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNITS 877

Query: 349  SACLAKGTSSP------GRTRTPAASL*KSTQPKSN--SLLRATILPTRTTSS 483
            SA  +   SS       G T TP++S    +Q +++  S    TI+PT+TT+S
Sbjct: 878  SAPSSIPFSSTTESFSTGTTVTPSSSKYPGSQTETSVSSTTETTIVPTKTTTS 930

>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 6/118 (5%)
 Frame = +1

Query: 169 GYSDHKIVTSN-SASLTPTRRPVWRPSMAVLNSSSPLTIXXXXXXXXXXXXIVSGMCS-- 339
           G  + K  TS  S +  P+ RP   P+   L SS PL                  + S  
Sbjct: 359 GNDEKKAKTSTPSCAKAPSHRPCLSPTRPTLGSSDPLIKPSSPAVSPEPATSPKHVSSVT 418

Query: 340 ---GTASACLAKGTSSPGRTRTPAASL*KSTQPKSNSLLRATILPTRTTSSRDCRPAS 504
              G+      K   + G+T    A+   +  P       AT +P +TT S    P S
Sbjct: 419 PRNGSPGTKQMKLKGADGKTGAKIATPRGAASPAQKGTSNATRIPAKTTPSPKTPPGS 476

>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 21/108 (19%), Positives = 41/108 (37%)
 Frame = +1

Query: 193 TSNSASLTPTRRPVWRPSMAVLNSSSPLTIXXXXXXXXXXXXIVSGMCSGTASACLAKGT 372
           T+++ S TPT             S++P T               S   + + ++  +   
Sbjct: 190 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTP 249

Query: 373 SSPGRTRTPAASL*KSTQPKSNSLLRATILPTRTTSSRDCRPASFTST 516
           ++   + TP  S   +T   S +   +T   T TTS+    P + T++
Sbjct: 250 TTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTS 297

>GNMT_HUMAN (Q14749) Glycine N-methyltransferase (EC 2.1.1.20)|
          Length = 294

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 31  PLFITNILENTNWYVSRKDTYFSTRTEFHIVFVVDSSPLAHMGVYQG-YSDHKIVTSNSA 207
           P F   ++E  NW    KD   S    F  V  + +S  AH+   +G  S+H++   N A
Sbjct: 105 PAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNS-FAHLPDCKGDQSEHRLALKNIA 163

Query: 208 SL 213
           S+
Sbjct: 164 SM 165

>SLU7_CRYNE (Q5KII3) Pre-mRNA-splicing factor SLU7|
          Length = 574

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 213 DTNKTSCMEAVDGSFELKLASNNFISGSTMTNVKLNRERHVQRHGKR 353
           DTNKTS +    G   L+   N  +SG T   V+ +R   + +  +R
Sbjct: 345 DTNKTSILAKYGGEEHLQRMPNELLSGQTENYVEYSRSGQIIKGRER 391

>SYFB_SALRD (Q2RYT3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 830

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +1

Query: 109 EFHIVFVVDSSPLAHMGVYQGYSDHKIVTSNSASLTPTRRPVWRPSMAVLNSSSPL 276
           EFH   +VDS+       Y+  S   +V  + A L P  +PV     A+  + +PL
Sbjct: 714 EFHWAALVDSATAEQHRDYEPVSRFPVVDRDLAVLVPADQPVGPLQRAIREAGAPL 769

>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta|
            chain 3) (Beta-IV spectrin)
          Length = 2564

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 389  RALQRPRCRRAHSRNRTACCEQRSCRREPLRLGTAGQQASHRPGLGR 529
            RA + PR RR   +      E+ + RR P R  +A  +A+H   LGR
Sbjct: 2239 RAEELPRRRRPERQESVDQSEEAARRRRPERQESAEHEAAHSLTLGR 2285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,098,645
Number of Sequences: 219361
Number of extensions: 1580138
Number of successful extensions: 5316
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5311
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)