ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein 1023 0.0
2gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence 117 4e-23
3gb|AY109619.1| Zea mays CL9605_1 mRNA sequence 117 4e-23
4gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6... 46 0.12
5gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.46
6gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7... 44 0.46
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
8dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
9dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
10emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; c... 44 0.46
11emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j2... 44 0.46
12emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3,... 44 0.46
13emb|AL671896.4| Mouse DNA sequence from clone RP23-354F16 on chr... 44 0.46
14gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbh... 42 1.8
15gb|AF297045.1| Zea mays homocysteine S-methyltransferase-2 mRNA,... 42 1.8
16gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 42 1.8
17gb|AC127338.4| Mus musculus BAC clone RP23-174F20 from 7, comple... 42 1.8
18gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, comple... 42 1.8
19emb|CR974413.1| M.murinus DNA sequence from clone CH257-4B4, com... 42 1.8
20emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in... 42 1.8
21emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, ... 42 1.8
22emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BA... 42 1.8
23emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial 42 1.8
24emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chro... 42 1.8
25ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation facto... 40 7.2
26gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 7.2
27gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosom... 40 7.2
28gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 7.2
29gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
30gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 7.2
31gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 7.2
32gb|AE009952.1| Yersinia pestis KIM, complete genome 40 7.2
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.2
34gb|AC006456.3| Homo sapiens PAC clone RP5-969D4 from 7, complete... 40 7.2
35gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosom... 40 7.2
36gb|AC023600.19| Homo sapiens 3 BAC RP11-754J20 (Roswell Park Can... 40 7.2
37gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Canc... 40 7.2
38gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, comple... 40 7.2
39ref|XM_719182.1| Plasmodium yoelii yoelii str. 17XNL nonclathrin... 40 7.2
40gb|AC119861.8| Mus musculus chromosome 3, clone RP23-291P19, com... 40 7.2
41gb|CP000001.1| Bacillus cereus E33L, complete genome 40 7.2
42emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and parti... 40 7.2
43emb|Y12461.1|HAPHAMLY Helianthus annuus mRNA for phenylalanine a... 40 7.2
44emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 7.2
45gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, co... 40 7.2
46emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 7.2
47emb|AL645800.5| Zebrafish DNA sequence from clone XX-184L24 Cont... 40 7.2
48emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; seg... 40 7.2
49gb|AC107905.5| Homo sapiens chromosome 15, clone CTD-2026J24, co... 40 7.2
50gb|AC025254.14| Homo sapiens 12 BAC RP11-1041F24 (Roswell Park C... 40 7.2
51gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds 40 7.2
52gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019... 40 7.2
53dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
54dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
55gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 40 7.2
56gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, compl... 40 7.2
57gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561... 40 7.2
58emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in ... 40 7.2
59gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK ge... 40 7.2
60gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 7.2
61emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 7.2
62emb|AL954855.8| Mouse DNA sequence from clone RP23-211L10 on chr... 40 7.2
63gb|AC156836.6| Mus musculus BAC clone RP23-88L11 from chromosome... 40 7.2
64gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosom... 40 7.2 
>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein
          Length = 1892

 Score = 1023 bits (516), Expect = 0.0
 Identities = 516/516 (100%)
 Strand = Plus / Minus

                                                                        
Query: 14   tatataagttttgttggcctttattcattacaaatatattagaaaatacaaattggtatg 73
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 tatataagttttgttggcctttattcattacaaatatattagaaaatacaaattggtatg 1824

                                                                        
Query: 74   tgtcaaggaaagacacttatttttcaactcgtactgagttccatatagtatttgtagttg 133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1823 tgtcaaggaaagacacttatttttcaactcgtactgagttccatatagtatttgtagttg 1764

                                                                        
Query: 134  atagtagtccgctcgctcacatgggtgtctaccaagggtactccgaccataagattgtca 193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1763 atagtagtccgctcgctcacatgggtgtctaccaagggtactccgaccataagattgtca 1704

                                                                        
Query: 194  cctcgaattcagcatcattgacaccaacaagacgtcctgtatggaggccgtcgatggcag 253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1703 cctcgaattcagcatcattgacaccaacaagacgtcctgtatggaggccgtcgatggcag 1644

                                                                        
Query: 254  ttttgaactcaagctcgcctctaacaatttcatctccggatccaccatgacgaatgtcaa 313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 ttttgaactcaagctcgcctctaacaatttcatctccggatccaccatgacgaatgtcaa 1584

                                                                        
Query: 314  gctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggggacca 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 gctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggggacca 1524

                                                                        
Query: 374  gctccccaggtcgcacgcgcactccagcggcctcgttgtagaagagcacacagccgaaat 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 gctccccaggtcgcacgcgcactccagcggcctcgttgtagaagagcacacagccgaaat 1464

                                                                        
Query: 434  cgaacagcttgctgcgagcaacgatcctgccgacgagaaccacttcgtctcgggactgca 493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 cgaacagcttgctgcgagcaacgatcctgccgacgagaaccacttcgtctcgggactgca 1404

                                                
Query: 494  ggccagcaagcttcacatcgacccggccttggacgc 529
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1403 ggccagcaagcttcacatcgacccggccttggacgc 1368
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>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence
          Length = 1034

 Score =  117 bits (59), Expect = 4e-23
 Identities = 136/161 (84%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                       
Query: 309 gtcaagctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggg 368
           ||||||||||||||| ||||||||||||||||||||||| || || | |||||||||  |
Sbjct: 706 gtcaagctcaatcgtcagcggcatgtgcagcggcacggcgagtgcttccctcgccaactg 647

                                                                       
Query: 369 gaccagctccccaggtcgcacgcgcactcca---gcggcctcgttgtagaagagcacaca 425
            |||||| |||| |||||||||  |||||||    |  |||| |||||||||||||| ||
Sbjct: 646 aaccagcccccccggtcgcacgttcactccattgtcaccctctttgtagaagagcacgca 587

                                                    
Query: 426 gccgaaatcgaacagcttgctgcgagcaacgatcctgccga 466
           ||| |  || |||||||||||||||||||||||||| ||||
Sbjct: 586 gccaacgtcaaacagcttgctgcgagcaacgatcctcccga 546
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>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence
          Length = 1251

 Score =  117 bits (59), Expect = 4e-23
 Identities = 241/302 (79%), Gaps = 6/302 (1%)
 Strand = Plus / Plus

                                                                       
Query: 163 taccaagggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaaca 222
           ||||||||||||| ||||||| | |||| ||| || ||||||||  ||||  | ||||||
Sbjct: 169 taccaagggtactgcgaccatgaaattgccacttccaattcagcgccattttctccaaca 228

                                                                       
Query: 223 agacgtcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatt 282
           || ||| | || ||  |||||| | | ||||  |||||||||||  | |||| |||||||
Sbjct: 229 agtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctccaacaatt 288

                                                                       
Query: 283 tcatctccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggc 342
           ||||| |||||   ||   || | | ||||||||||||||| ||||||||||||||||||
Sbjct: 289 tcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgcagcggc 345

                                                                       
Query: 343 acggcaagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactcca--- 399
           ||||| ||||| | |||||||||  | | |||||     |||||||||  |||||||   
Sbjct: 346 acggcgagcgcttccctcgccaactgaatcagctnnnnnggtcgcacgttcactccattg 405

                                                                       
Query: 400 gcggcctcgttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacgatc 459
            |  |||| |||||||||||||| |||||||  |||||||||||||||||||||||||||
Sbjct: 406 tcaccctctttgtagaagagcacgcagccgacgtcgaacagcttgctgcgagcaacgatc 465

             
Query: 460 ct 461
           ||
Sbjct: 466 ct 467
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>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete
              sequence
          Length = 253001

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 33     tttattcattacaaatatattag 55
              |||||||||||||||||||||||
Sbjct: 102781 tttattcattacaaatatattag 102759
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 332     tgtgcagcggcacggcaagcgc 353
               ||||||||||||||||||||||
Sbjct: 1043253 tgtgcagcggcacggcaagcgc 1043232
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>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete
              sequence
          Length = 253924

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 42     tacaaatatattagaaaatacaaatt 67
              |||||||||||||||||||| |||||
Sbjct: 237232 tacaaatatattagaaaataaaaatt 237257
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 4        aaaacatatatatataagttttgttg 29
                ||||||| ||||||||||||||||||
Sbjct: 20034725 aaaacatctatatataagttttgttg 20034700
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>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1068H08
          Length = 152794

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 4     aaaacatatatatataagttttgttg 29
             ||||||| ||||||||||||||||||
Sbjct: 22999 aaaacatctatatataagttttgttg 22974
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>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1018E06
          Length = 178499

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 4      aaaacatatatatataagttttgttg 29
              ||||||| ||||||||||||||||||
Sbjct: 173065 aaaacatctatatataagttttgttg 173040
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>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni
          Length = 328

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 501 aagcttcacatcgacccggccttgga 526
           ||||||||| ||||||||||||||||
Sbjct: 7   aagcttcacgtcgacccggccttgga 32
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>emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j20, complete sequence
          Length = 174636

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 27   ttggcctttattcattacaaat 48
            ||||||||||||||||||||||
Sbjct: 8931 ttggcctttattcattacaaat 8952
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>emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3, complete sequence
          Length = 174662

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 27    ttggcctttattcattacaaat 48
             ||||||||||||||||||||||
Sbjct: 91099 ttggcctttattcattacaaat 91120
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>emb|AL671896.4| Mouse DNA sequence from clone RP23-354F16 on chromosome X, complete
             sequence
          Length = 78197

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    ttttgttggcctttattcatta 43
             ||||||||||||||||||||||
Sbjct: 12446 ttttgttggcctttattcatta 12425
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>gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbhS1) gene, partial
            cds; and hypothetical protein, phosphatidate
            cytidylytransferase (cds), undecaprenyl pyrophosphate
            (yaes), hypothetical protein,
            3-deoxy-D-manno-2-octulosonate-8-phosphate synthase
            (kdsA), molybdenum transport system permease (modB),
            riboflavin synthase beta subunit (ribH), transcription
            termination factor (nusB), hypothetical protein, NADH
            dehydrogenase (nuo), cytochrome c peroxidase (ccpR), heat
            shock protein 70 (dnaK), and hypothetical protein genes,
            complete cds
          Length = 12698

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 463  ccgacgagaaccacttcgtct 483
            |||||||||||||||||||||
Sbjct: 9770 ccgacgagaaccacttcgtct 9750
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>gb|AF297045.1| Zea mays homocysteine S-methyltransferase-2 mRNA, complete cds
          Length = 1535

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 4    aaaacatatatatataagttttgtt 28
            ||||| |||||||||||||||||||
Sbjct: 1493 aaaacctatatatataagttttgtt 1517
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>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence
          Length = 196646

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 36     attcattacaaatatattagaaaat 60
              |||| ||||||||||||||||||||
Sbjct: 185977 attctttacaaatatattagaaaat 186001
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>gb|AC127338.4| Mus musculus BAC clone RP23-174F20 from 7, complete sequence
          Length = 199546

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1      agcaaaacatatatatataagtttt 25
              ||||||||||||||||||| |||||
Sbjct: 145986 agcaaaacatatatatatatgtttt 145962
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>gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, complete sequence
          Length = 185702

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 36     attcattacaaatatattagaaaat 60
              |||| ||||||||||||||||||||
Sbjct: 164886 attctttacaaatatattagaaaat 164862
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>emb|CR974413.1| M.murinus DNA sequence from clone CH257-4B4, complete sequence
          Length = 270722

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    aatatattagaaaatacaaat 66
             |||||||||||||||||||||
Sbjct: 67333 aatatattagaaaatacaaat 67313
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>emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in linkage group 5,
             complete sequence
          Length = 149707

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    ggtatgtgtcaaggaaagaca 88
             |||||||||||||||||||||
Sbjct: 27383 ggtatgtgtcaaggaaagaca 27363
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>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34
          Length = 196107

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 4     aaaacatatatatataagttttgtt 28
             |||||||||||||||||| ||||||
Sbjct: 82939 aaaacatatatatataagatttgtt 82963
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>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project)
          Length = 137519

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 4     aaaacatatatatataagttttgtt 28
             |||||||||||||||||| ||||||
Sbjct: 78407 aaaacatatatatataagatttgtt 78431
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>emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial
          Length = 1820

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 463  ccgacgagaaccacttcgtct 483
            |||||||||||||||||||||
Sbjct: 1031 ccgacgagaaccacttcgtct 1011
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>emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chromosome X, complete
              sequence
          Length = 211194

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 45     aaatatattagaaaatacaaa 65
              |||||||||||||||||||||
Sbjct: 159697 aaatatattagaaaatacaaa 159677
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>ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation factor-like protein
           (DDB0229377), partial mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 tatttgtagttgatagtagt 141
           ||||||||||||||||||||
Sbjct: 203 tatttgtagttgatagtagt 222
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>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the
              complete genome
          Length = 290393

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    gctcaatcgtgagcggcatg 333
              ||||||||||||||||||||
Sbjct: 215761 gctcaatcgtgagcggcatg 215780
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>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence
          Length = 211002

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    gaccagctccccaggtcgca 388
              ||||||||||||||||||||
Sbjct: 153238 gaccagctccccaggtcgca 153219
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 40      attacaaatatattagaaaa 59
               ||||||||||||||||||||
Sbjct: 3276173 attacaaatatattagaaaa 3276154
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06,
              complete sequence
          Length = 187651

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    gttgtagaagagcacacagc 427
              ||||||||||||||||||||
Sbjct: 159141 gttgtagaagagcacacagc 159160
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 40      attacaaatatattagaaaa 59
               ||||||||||||||||||||
Sbjct: 3276739 attacaaatatattagaaaa 3276720
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 335     gcagcggcacggcaagcgcatgcc 358
               ||||||||||||||||||| ||||
Sbjct: 2556779 gcagcggcacggcaagcgcgtgcc 2556802
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     gctcaatcgtgagcggcatg 333
               ||||||||||||||||||||
Sbjct: 3650813 gctcaatcgtgagcggcatg 3650794
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 10       tatatatataagttttgttg 29
                ||||||||||||||||||||
Sbjct: 35308745 tatatatataagttttgttg 35308726
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>gb|AC006456.3| Homo sapiens PAC clone RP5-969D4 from 7, complete sequence
          Length = 75609

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ttcattacaaatatattaga 56
             ||||||||||||||||||||
Sbjct: 40786 ttcattacaaatatattaga 40767
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>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete
             sequence
          Length = 178757

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   gaccagctccccaggtcgca 388
             ||||||||||||||||||||
Sbjct: 51098 gaccagctccccaggtcgca 51079
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>gb|AC023600.19| Homo sapiens 3 BAC RP11-754J20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185326

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ttattcattacaaatatatt 53
              ||||||||||||||||||||
Sbjct: 144526 ttattcattacaaatatatt 144507
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>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178905

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 56    aaaatacaaattggtatgtgtcaaggaa 83
             |||||| |||| ||||||||||||||||
Sbjct: 35506 aaaataaaaataggtatgtgtcaaggaa 35533
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>gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, complete sequence
          Length = 191019

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      atatatatataagttttgtt 28
              ||||||||||||||||||||
Sbjct: 130577 atatatatataagttttgtt 130558
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>ref|XM_719182.1| Plasmodium yoelii yoelii str. 17XNL nonclathrin coat protein
           zeta1-COP (PY04027) partial mRNA
          Length = 642

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  tacaaatatattagaaaata 61
           ||||||||||||||||||||
Sbjct: 81  tacaaatatattagaaaata 100
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>gb|AC119861.8| Mus musculus chromosome 3, clone RP23-291P19, complete sequence
          Length = 206094

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      atatatatataagttttgtt 28
              ||||||||||||||||||||
Sbjct: 152814 atatatatataagttttgtt 152795
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 40      attacaaatatattagaaaa 59
               ||||||||||||||||||||
Sbjct: 3347373 attacaaatatattagaaaa 3347354
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>emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and partial dnaJ gene
          Length = 2934

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 463  ccgacgagaaccacttcgtc 482
            ||||||||||||||||||||
Sbjct: 1236 ccgacgagaaccacttcgtc 1217
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>emb|Y12461.1|HAPHAMLY Helianthus annuus mRNA for phenylalanine ammonia lyase
          Length = 2322

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   aaatatattagaaaatacaa 64
            ||||||||||||||||||||
Sbjct: 2297 aaatatattagaaaatacaa 2278
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    gaaatcgaacagcttgctgc 448
              ||||||||||||||||||||
Sbjct: 250392 gaaatcgaacagcttgctgc 250373
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>gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, complete sequence
          Length = 180310

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    attacaaatatattagaaaa 59
             ||||||||||||||||||||
Sbjct: 63211 attacaaatatattagaaaa 63230
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     gctcaatcgtgagcggcatg 333
               ||||||||||||||||||||
Sbjct: 3768518 gctcaatcgtgagcggcatg 3768499
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>emb|AL645800.5| Zebrafish DNA sequence from clone XX-184L24 Contains three novel genes
             and the spi1 gene for transcription factor spi1, complete
             sequence
          Length = 98204

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    atatattagaaaatacaaat 66
             ||||||||||||||||||||
Sbjct: 31343 atatattagaaaatacaaat 31362
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>emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; segment 5/20
          Length = 208050

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    gctcaatcgtgagcggcatg 333
              ||||||||||||||||||||
Sbjct: 111744 gctcaatcgtgagcggcatg 111725
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>gb|AC107905.5| Homo sapiens chromosome 15, clone CTD-2026J24, complete sequence
          Length = 175627

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tatattagaaaatacaaatt 67
             ||||||||||||||||||||
Sbjct: 59078 tatattagaaaatacaaatt 59059
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>gb|AC025254.14| Homo sapiens 12 BAC RP11-1041F24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160867

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    aatatattagaaaatacaaa 65
             ||||||||||||||||||||
Sbjct: 90262 aatatattagaaaatacaaa 90281
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>gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds
          Length = 2266

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  accaacaagacgtcctgtat 235
            ||||||||||||||||||||
Sbjct: 1270 accaacaagacgtcctgtat 1251
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>gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019H15 map 15q21.2, complete
             sequence
          Length = 176872

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaacatatatatataagttt 24
             ||||||||||||||||||||
Sbjct: 26389 aaacatatatatataagttt 26408
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 408      gttgtagaagagcacacagc 427
                ||||||||||||||||||||
Sbjct: 24090652 gttgtagaagagcacacagc 24090671
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 10       tatatatataagttttgttg 29
                ||||||||||||||||||||
Sbjct: 35398817 tatatatataagttttgttg 35398798
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>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
             sequence
          Length = 116443

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tatatatataagttttgttg 29
             ||||||||||||||||||||
Sbjct: 59709 tatatatataagttttgttg 59728
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>gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, complete sequence
          Length = 173317

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    cattacaaatatattagaaa 58
             ||||||||||||||||||||
Sbjct: 35499 cattacaaatatattagaaa 35518
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>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence
          Length = 203200

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 488    actgcaggccagcaagcttc 507
              ||||||||||||||||||||
Sbjct: 104383 actgcaggccagcaagcttc 104364
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>emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in linkage group 1,
             complete sequence
          Length = 165355

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    acaaatatattagaaaatac 62
             ||||||||||||||||||||
Sbjct: 25068 acaaatatattagaaaatac 25049
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>gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK gene, complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 463  ccgacgagaaccacttcgtc 482
            ||||||||||||||||||||
Sbjct: 1007 ccgacgagaaccacttcgtc 988
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 40      attacaaatatattagaaaa 59
               ||||||||||||||||||||
Sbjct: 3276046 attacaaatatattagaaaa 3276027
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      acatatatatataagttttg 26
              ||||||||||||||||||||
Sbjct: 156042 acatatatatataagttttg 156061
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>emb|AL954855.8| Mouse DNA sequence from clone RP23-211L10 on chromosome X, complete
             sequence
          Length = 87910

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    agaaaatacaaattggtatg 73
             ||||||||||||||||||||
Sbjct: 35463 agaaaatacaaattggtatg 35482
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>gb|AC156836.6| Mus musculus BAC clone RP23-88L11 from chromosome 10, complete sequence
          Length = 255961

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aacatatatatataagtttt 25
             ||||||||||||||||||||
Sbjct: 30210 aacatatatatataagtttt 30191
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>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete
             sequence
          Length = 186404

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   gaccagctccccaggtcgca 388
             ||||||||||||||||||||
Sbjct: 35474 gaccagctccccaggtcgca 35455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,753,774
Number of Sequences: 3902068
Number of extensions: 13753774
Number of successful extensions: 124577
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123931
Number of HSP's gapped (non-prelim): 645
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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