ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
2dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic D... 60 3e-06
3dbj|AK119783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 3e-06
4dbj|AK066629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 3e-06
5tpg|BK000976.1| TPA: TPA_exp: Homo sapiens keratin 6l (KRT6L) ge... 48 0.013
6gb|AC107016.20| Homo sapiens 12 BAC RP11-153F5 (Roswell Park Can... 48 0.013
7dbj|AK098958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.013
8gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, comple... 46 0.051
9gb|AC170265.4| Mus musculus BAC RP23-54H4 (Roswell Park Cancer ... 44 0.20
10ref|XM_957841.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.20
11ref|XM_326072.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.20
12gb|AC129263.6| Rattus norvegicus 2 BAC CH230-258E4 (Children's H... 44 0.20
13gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Canc... 44 0.20
14dbj|AK106145.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.20
15dbj|AK061720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.20
16emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chr... 44 0.20
17ref|XM_613578.2| PREDICTED: Bos taurus similar to Activated RNA ... 42 0.80
18ref|XM_872977.1| PREDICTED: Bos taurus similar to Activated RNA ... 42 0.80
19gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complet... 42 0.80
20gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, comp... 42 0.80
21emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, B... 42 0.80
22gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, compl... 42 0.80
23gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell... 42 0.80
24gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, comp... 42 0.80
25dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone... 42 0.80
26dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 0.80
27gb|AC120880.8| Mus musculus chromosome 3, clone RP24-553A12, com... 40 3.2
28gb|AF025841.1| Homo sapiens acute myeloid leukemia 1 protein (AM... 40 3.2
29gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
30gb|AC131771.2| Mus musculus BAC clone RP24-297P10 from chromosom... 40 3.2
31gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Canc... 40 3.2
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
33gb|AC153559.4| Mus musculus 10 BAC RP23-86P1 (Roswell Park Cance... 40 3.2
34dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 3.2
35gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, c... 40 3.2
36gb|AC152415.4| Mus musculus BAC clone RP23-359F16 from 10, compl... 40 3.2
37emb|AL157997.5|CNS01RGI Human chromosome 14 DNA sequence BAC R-5... 40 3.2
38emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-7... 40 3.2
39dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 3.2
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
41dbj|AP000332.2| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 40 3.2
42dbj|AP000331.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 3.2
43dbj|AP000172.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 3.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                            
Query: 109      gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcccctaatttgcaaca 168
                |||||||| |||||  ||||||||||| || || ||| | ||| ||||||||||||||||
Sbjct: 35864784 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 35864843

                      
Query: 169      caagca 174
                ||||||
Sbjct: 35864844 caagca 35864849
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>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                          
Query: 109    gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcccctaatttgcaaca 168
              |||||||| |||||  ||||||||||| || || ||| | ||| ||||||||||||||||
Sbjct: 129242 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 129301

                    
Query: 169    caagca 174
              ||||||
Sbjct: 129302 caagca 129307
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>dbj|AK119783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F04, full
            insert sequence
          Length = 1678

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 109  gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcccctaatttgcaaca 168
            |||||||| |||||  ||||||||||| || || ||| | ||| ||||||||||||||||
Sbjct: 1673 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 1614

                  
Query: 169  caagca 174
            ||||||
Sbjct: 1613 caagca 1608
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>dbj|AK066629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071A10, full
            insert sequence
          Length = 1745

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 109  gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcccctaatttgcaaca 168
            |||||||| |||||  ||||||||||| || || ||| | ||| ||||||||||||||||
Sbjct: 1675 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 1616

                  
Query: 169  caagca 174
            ||||||
Sbjct: 1615 caagca 1610
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>tpg|BK000976.1| TPA: TPA_exp: Homo sapiens keratin 6l (KRT6L) gene, complete cds
          Length = 14386

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 26    aggcatcaggatgttaatcaatgg 49
             ||||||||||||||||||||||||
Sbjct: 13889 aggcatcaggatgttaatcaatgg 13866
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>gb|AC107016.20| Homo sapiens 12 BAC RP11-153F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191947

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 26     aggcatcaggatgttaatcaatgg 49
              ||||||||||||||||||||||||
Sbjct: 150216 aggcatcaggatgttaatcaatgg 150193
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>dbj|AK098958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063N02, full
            insert sequence
          Length = 1656

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 127  ggcaaaatgacagcagtgattgaattcccctaatttgcaacacaagca 174
            ||||||||| || || ||| | ||| ||||||||||||||||||||||
Sbjct: 1656 ggcaaaatggcaacattgaataaatgcccctaatttgcaacacaagca 1609
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>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence
          Length = 200028

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 65    caaatgaaattgtttgctcataa 87
             |||||||||||||||||||||||
Sbjct: 68216 caaatgaaattgtttgctcataa 68238
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>gb|AC170265.4| Mus musculus  BAC RP23-54H4 (Roswell Park Cancer Institute (C57BL/6J
            Female) Mouse BAC Library) complete sequence
          Length = 210754

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 110  aagcaaaactgagacttggcaa 131
            ||||||||||||||||||||||
Sbjct: 5788 aagcaaaactgagacttggcaa 5809
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>ref|XM_957841.1| Neurospora crassa OR74A hypothetical protein (NCU06218.1) partial
            mRNA
          Length = 2520

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 217  aagaaagaaacagaagtgaaga 238
            ||||||||||||||||||||||
Sbjct: 1490 aagaaagaaacagaagtgaaga 1511
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>ref|XM_326072.1| Neurospora crassa OR74A hypothetical protein (NCU06218.1) partial
            mRNA
          Length = 2520

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 217  aagaaagaaacagaagtgaaga 238
            ||||||||||||||||||||||
Sbjct: 1490 aagaaagaaacagaagtgaaga 1511
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>gb|AC129263.6| Rattus norvegicus 2 BAC CH230-258E4 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 194958

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 213    ctaaaagaaagaaacagaagtgaaga 238
              |||||||||||| |||||||||||||
Sbjct: 117244 ctaaaagaaagacacagaagtgaaga 117219
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>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 193116

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 110    aagcaaaactgagacttggcaa 131
              ||||||||||||||||||||||
Sbjct: 101034 aagcaaaactgagacttggcaa 101013
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>dbj|AK106145.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H02, full
            insert sequence
          Length = 1599

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 153  cccctaatttgcaacacaagca 174
            ||||||||||||||||||||||
Sbjct: 1590 cccctaatttgcaacacaagca 1569
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>dbj|AK061720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A01, full
            insert sequence
          Length = 1599

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 153  cccctaatttgcaacacaagca 174
            ||||||||||||||||||||||
Sbjct: 1590 cccctaatttgcaacacaagca 1569
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>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete
             sequence
          Length = 190994

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 48    ggtctcttctcactggacaaat 69
             ||||||||||||||||||||||
Sbjct: 97779 ggtctcttctcactggacaaat 97758
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>ref|XM_613578.2| PREDICTED: Bos taurus similar to Activated RNA polymerase II
           transcriptional coactivator p15 (Positive cofactor 4)
           (PC4) (p14), transcript variant 1 (LOC533984), mRNA
          Length = 971

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 218 agaaagaaacagaagtgaaga 238
           |||||||||||||||||||||
Sbjct: 942 agaaagaaacagaagtgaaga 922
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>ref|XM_872977.1| PREDICTED: Bos taurus similar to Activated RNA polymerase II
           transcriptional coactivator p15 (Positive cofactor 4)
           (PC4) (p14), transcript variant 2 (LOC533984), mRNA
          Length = 884

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 218 agaaagaaacagaagtgaaga 238
           |||||||||||||||||||||
Sbjct: 855 agaaagaaacagaagtgaaga 835
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>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence
          Length = 115045

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    cataaggaaataaaacaactggcca 107
             ||||||||||||||| |||||||||
Sbjct: 94217 cataaggaaataaaagaactggcca 94193
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>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 83     cataaggaaataaaacaactggcca 107
              ||||||||||||||| |||||||||
Sbjct: 144113 cataaggaaataaaagaactggcca 144137
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>emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, BAC clone F13G24 (ESSA project)
          Length = 88095

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   aaaactgagacttggcaaaat 134
             |||||||||||||||||||||
Sbjct: 79269 aaaactgagacttggcaaaat 79249
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>gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, complete sequence
          Length = 187084

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 76     gtttgctcataaggaaataaaacaa 100
              ||||||||||||||||||| |||||
Sbjct: 166872 gtttgctcataaggaaatacaacaa 166848
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>gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 195501

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    tcataaggaaataaaacaact 102
             |||||||||||||||||||||
Sbjct: 30861 tcataaggaaataaaacaact 30841
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>gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, complete sequence
          Length = 192708

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 76    gtttgctcataaggaaataaaacaa 100
             ||||||||||||||||||| |||||
Sbjct: 36748 gtttgctcataaggaaatacaacaa 36724
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>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a,
             complete sequence
          Length = 96704

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 84    ataaggaaataaaacaactggccac 108
             |||||||| ||||||||||||||||
Sbjct: 73772 ataaggaattaaaacaactggccac 73796
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>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541,
             complete sequence
          Length = 110985

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 84    ataaggaaataaaacaactggccac 108
             |||||||| ||||||||||||||||
Sbjct: 59647 ataaggaattaaaacaactggccac 59671
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>gb|AC120880.8| Mus musculus chromosome 3, clone RP24-553A12, complete sequence
          Length = 147280

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    agaaagaaacagaagtgaagattt 241
              ||||||||||||||||||| ||||
Sbjct: 128420 agaaagaaacagaagtgaatattt 128443
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>gb|AF025841.1| Homo sapiens acute myeloid leukemia 1 protein (AML1) gene, exons 5
           through 8 and partial cds, alternatively spliced
          Length = 11503

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  aatggtctcttctcactgga 64
           ||||||||||||||||||||
Sbjct: 865 aatggtctcttctcactgga 884
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>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0542B04, complete sequence
          Length = 182823

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   aagctaaaagaaagaaacag 229
             ||||||||||||||||||||
Sbjct: 54886 aagctaaaagaaagaaacag 54905
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>gb|AC131771.2| Mus musculus BAC clone RP24-297P10 from chromosome 10, complete
             sequence
          Length = 145678

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   tgagacttggcaaaatgaca 138
             ||||||||||||||||||||
Sbjct: 55700 tgagacttggcaaaatgaca 55719
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>gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178336

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    atcaggatgttaatcaatgg 49
             ||||||||||||||||||||
Sbjct: 55962 atcaggatgttaatcaatgg 55943
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 210      aagctaaaagaaagaaacag 229
                ||||||||||||||||||||
Sbjct: 20236579 aagctaaaagaaagaaacag 20236598
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>gb|AC153559.4| Mus musculus 10 BAC RP23-86P1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 185708

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   agctaaaagaaagaaacaga 230
             ||||||||||||||||||||
Sbjct: 23668 agctaaaagaaagaaacaga 23649
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>dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 28/28, complete
              sequence
          Length = 107897

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aatggtctcttctcactgga 64
              ||||||||||||||||||||
Sbjct: 107362 aatggtctcttctcactgga 107343
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>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence
          Length = 205069

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 217    aagaaagaaacagaagtgaagatt 240
              |||||| |||||||||||||||||
Sbjct: 102170 aagaaataaacagaagtgaagatt 102147
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>gb|AC152415.4| Mus musculus BAC clone RP23-359F16 from 10, complete sequence
          Length = 195249

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    tgagacttggcaaaatgaca 138
              ||||||||||||||||||||
Sbjct: 173987 tgagacttggcaaaatgaca 174006
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>emb|AL157997.5|CNS01RGI Human chromosome 14 DNA sequence BAC R-50H7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170072

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aaactgagacttggcaaaat 134
             ||||||||||||||||||||
Sbjct: 13397 aaactgagacttggcaaaat 13378
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>emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-783L4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184656

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    aaactgagacttggcaaaat 134
              ||||||||||||||||||||
Sbjct: 181060 aaactgagacttggcaaaat 181041
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>dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, section 65/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aatggtctcttctcactgga 64
              ||||||||||||||||||||
Sbjct: 149233 aatggtctcttctcactgga 149214
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 210      aagctaaaagaaagaaacag 229
                ||||||||||||||||||||
Sbjct: 20520613 aagctaaaagaaagaaacag 20520632
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>dbj|AP000332.2| Homo sapiens genomic DNA, chromosome 21q22.1, clone:T1017,
            D21S226-AML region, complete sequence
          Length = 22348

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   aatggtctcttctcactgga 64
            ||||||||||||||||||||
Sbjct: 2461 aatggtctcttctcactgga 2442
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>dbj|AP000331.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:PQ122C7/499A22, complete sequence
          Length = 64326

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aatggtctcttctcactgga 64
             ||||||||||||||||||||
Sbjct: 63953 aatggtctcttctcactgga 63934
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>dbj|AP000172.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B2344F14-f50E8, segment 8/9, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aatggtctcttctcactgga 64
             ||||||||||||||||||||
Sbjct: 97992 aatggtctcttctcactgga 97973


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,365,611
Number of Sequences: 3902068
Number of extensions: 4365611
Number of successful extensions: 71989
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71872
Number of HSP's gapped (non-prelim): 117
length of query: 245
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 223
effective length of database: 17,147,199,772
effective search space: 3823825549156
effective search space used: 3823825549156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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