>WDR8_HUMAN (Q9P2S5) WD-repeat protein 8|
          Length = 460

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -1

Query: 479 DPTCPRLVLCTESPHLYMWTPSGACCVNIP-LPNFRIVDLKWNSAGSCLLLKDRDSFC 309
           DP  PRL +CT    LY+W+P+G   V +P   +F ++ L W+ +G  + L  +D FC
Sbjct: 382 DPQQPRLAICTGGSRLYLWSPAGCMSVQVPGEGDFAVLSLCWHLSGDSMALLSKDHFC 439

>WDR8_MOUSE (Q9JM98) WD-repeat protein 8|
          Length = 462

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
 Frame = -1

Query: 479 DPTCPRLVLCTESPHLYMWTPSGACCVNIPLP---NFRIVDLKWNSAGSCLLLKDRDSFC 309
           DP  PRL +CT    +Y+W+P+G  CV++ +P   +F ++ L W+ +G  L L  +D FC
Sbjct: 382 DPQQPRLAICTGGSKVYLWSPAG--CVSVQVPGEGDFAVLGLCWHLSGDSLALLSKDHFC 439

>RIR1_ENCCU (Q8SR37) Ribonucleoside-diphosphate reductase large chain (EC|
           1.17.4.1) (Ribonucleotide reductase)
          Length = 768

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 146 SIWVRRLF*SGRVRNTEECCFFCYTTAVGFLEV 48
           ++W+  LF   RV+N EE   FC + AVG  +V
Sbjct: 325 ALWINDLF-MERVKNNEEWSLFCPSQAVGLSDV 356

>CASK_BUBBU (P11840) Kappa-casein precursor|
          Length = 190

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 60  PNSSCITEETTFFRVPHPSRSEQS--PHPNRSTANLLCYNVIISID 191
           P  SC  + TT  R PHP  S  +  P  N+    +   N I+S++
Sbjct: 105 PAKSCQAQPTTMTRHPHPHLSFMAIPPKKNQDKTEIPTINTIVSVE 150

>HEM31_STRAW (Q82E76) Porphobilinogen deaminase 1 (EC 2.5.1.61) (PBG 1)|
           (Hydroxymethylbilane synthase 1) (HMBS 1)
           (Pre-uroporphyrinogen synthase 1)
          Length = 324

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 396 HSLAELPDSRPEMELSGKLPPPQGPRFVLLCRD 298
           HSL +LP ++P+      +P  + PR VL+ RD
Sbjct: 78  HSLKDLPTAQPDELALAAVPVREDPRDVLVARD 110

>POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1839

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 13/58 (22%)
 Frame = -3

Query: 471 VPTPRLVHG-------------EPAPVHVDAIRRLLRQHSLAELPDSRPEMELSGKLP 337
           V +PRL+H               P P+ V  +   L  HSL   P  RP +EL  +LP
Sbjct: 444 VSSPRLLHSILPSQLRGAAIPNRPLPLWVTKLHHFLDSHSLLPTPPIRPRIELQ-RLP 500

>Y909_VIBPA (Q87R88) UPF0061 protein VP0909|
          Length = 489

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -3

Query: 396 HSLAELP----DSRPEMELSGKLPPPQGPRFVLLC 304
           H LAE+     DS+PE E   KLPP  G +  + C
Sbjct: 453 HRLAEILRHPYDSQPEFEAYAKLPPEWGKKMEISC 487

>CAC2_YEAST (Q04199) Chromatin assembly factor 1 subunit p60 (CAF-1 60 kDa|
           subunit)
          Length = 468

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 374 IVDLKWNSAGSCLLLKDRDSFC 309
           I DL W+  GS LL+   D FC
Sbjct: 376 ITDLAWSEDGSTLLISSTDGFC 397

>INX6_DROME (Q9VR82) Innexin inx6 (Innexin-6) (Gap junction protein prp6)|
           (Pas-related protein 6)
          Length = 481

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 479 DPTCPRLVLCTESPHLYMWTPSGACCVNIPLPNFRIVDL 363
           DPT  R  +CTES H     P+ A  +N+  PN  I+ +
Sbjct: 435 DPTADRHSICTESSHRVTAMPT-APTLNLMAPNDEIISM 472


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,382,165
Number of Sequences: 219361
Number of extensions: 1180314
Number of successful extensions: 3612
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3610
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)