ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart36e09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466001.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 151 bits (76), Expect = 2e-33 Identities = 193/232 (83%) Strand = Plus / Minus Query: 184 agccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagg 243 ||||||| |||| |||||| || |||| ||| |||||||||||| || |||||||| | Sbjct: 907 agccgatgagcaatttgttctcttccagaaatgagtaggtcgggacttcgaggttgtatg 848 Query: 244 gggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcaga 303 | || || ||||| | |||||||||||| || || || ||||| ||||| ||||| |||| Sbjct: 847 gtgcagggcccttacggattctacctgatatatcataatgtgatccatggcatggacaga 788 Query: 304 accagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgcagacac 363 |||||||||| ||||| ||| |||||| || |||||||||||||| ||||| || || | Sbjct: 787 accagccaccaaagtcaccagcgttgggaagtggaatgcagcccagatgagtacacaccc 728 Query: 364 caatgacaacaagccactcagggttcttgacacgcaccgcatcctcctgtgg 415 |||| ||||| |||||||||||||||||||| || ||||||||| |||||| Sbjct: 727 caatcacaaccagccactcagggttcttgactcgttccgcatcctgctgtgg 676
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 151 bits (76), Expect = 2e-33 Identities = 193/232 (83%) Strand = Plus / Plus Query: 184 agccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagg 243 ||||||| |||| |||||| || |||| ||| |||||||||||| || |||||||| | Sbjct: 19000593 agccgatgagcaatttgttctcttccagaaatgagtaggtcgggacttcgaggttgtatg 19000652 Query: 244 gggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcaga 303 | || || ||||| | |||||||||||| || || || ||||| ||||| ||||| |||| Sbjct: 19000653 gtgcagggcccttacggattctacctgatatatcataatgtgatccatggcatggacaga 19000712 Query: 304 accagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgcagacac 363 |||||||||| ||||| ||| |||||| || |||||||||||||| ||||| || || | Sbjct: 19000713 accagccaccaaagtcaccagcgttgggaagtggaatgcagcccagatgagtacacaccc 19000772 Query: 364 caatgacaacaagccactcagggttcttgacacgcaccgcatcctcctgtgg 415 |||| ||||| |||||||||||||||||||| || ||||||||| |||||| Sbjct: 19000773 caatcacaaccagccactcagggttcttgactcgttccgcatcctgctgtgg 19000824
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 151 bits (76), Expect = 2e-33 Identities = 193/232 (83%) Strand = Plus / Plus Query: 184 agccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagg 243 ||||||| |||| |||||| || |||| ||| |||||||||||| || |||||||| | Sbjct: 55914 agccgatgagcaatttgttctcttccagaaatgagtaggtcgggacttcgaggttgtatg 55973 Query: 244 gggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcaga 303 | || || ||||| | |||||||||||| || || || ||||| ||||| ||||| |||| Sbjct: 55974 gtgcagggcccttacggattctacctgatatatcataatgtgatccatggcatggacaga 56033 Query: 304 accagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgcagacac 363 |||||||||| ||||| ||| |||||| || |||||||||||||| ||||| || || | Sbjct: 56034 accagccaccaaagtcaccagcgttgggaagtggaatgcagcccagatgagtacacaccc 56093 Query: 364 caatgacaacaagccactcagggttcttgacacgcaccgcatcctcctgtgg 415 |||| ||||| |||||||||||||||||||| || ||||||||| |||||| Sbjct: 56094 caatcacaaccagccactcagggttcttgactcgttccgcatcctgctgtgg 56145
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 151 bits (76), Expect = 2e-33 Identities = 193/232 (83%) Strand = Plus / Plus Query: 184 agccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagg 243 ||||||| |||| |||||| || |||| ||| |||||||||||| || |||||||| | Sbjct: 6114 agccgatgagcaatttgttctcttccagaaatgagtaggtcgggacttcgaggttgtatg 6173 Query: 244 gggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcaga 303 | || || ||||| | |||||||||||| || || || ||||| ||||| ||||| |||| Sbjct: 6174 gtgcagggcccttacggattctacctgatatatcataatgtgatccatggcatggacaga 6233 Query: 304 accagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgcagacac 363 |||||||||| ||||| ||| |||||| || |||||||||||||| ||||| || || | Sbjct: 6234 accagccaccaaagtcaccagcgttgggaagtggaatgcagcccagatgagtacacaccc 6293 Query: 364 caatgacaacaagccactcagggttcttgacacgcaccgcatcctcctgtgg 415 |||| ||||| |||||||||||||||||||| || ||||||||| |||||| Sbjct: 6294 caatcacaaccagccactcagggttcttgactcgttccgcatcctgctgtgg 6345
>dbj|AK102815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108M09, full insert sequence Length = 1157 Score = 151 bits (76), Expect = 2e-33 Identities = 193/232 (83%) Strand = Plus / Minus Query: 184 agccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagg 243 ||||||| |||| |||||| || |||| ||| |||||||||||| || |||||||| | Sbjct: 907 agccgatgagcaatttgttctcttccagaaatgagtaggtcgggacttcgaggttgtatg 848 Query: 244 gggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcaga 303 | || || ||||| | |||||||||||| || || || ||||| ||||| ||||| |||| Sbjct: 847 gtgcagggcccttacggattctacctgatatatcataatgtgatccatggcatggacaga 788 Query: 304 accagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgcagacac 363 |||||||||| ||||| ||| |||||| || |||||||||||||| ||||| || || | Sbjct: 787 accagccaccaaagtcaccagcgttgggaagtggaatgcagcccagatgagtacacaccc 728 Query: 364 caatgacaacaagccactcagggttcttgacacgcaccgcatcctcctgtgg 415 |||| ||||| |||||||||||||||||||| || ||||||||| |||||| Sbjct: 727 caatcacaaccagccactcagggttcttgactcgttccgcatcctgctgtgg 676
>gb|BT018238.1| Zea mays clone EL01N0563B05.c mRNA sequence Length = 971 Score = 133 bits (67), Expect = 5e-28 Identities = 190/231 (82%) Strand = Plus / Minus Query: 178 gctcttagccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggt 237 ||||||| || || |||| |||||| |||||||| |||||||||||||||||||| |||| Sbjct: 790 gctcttaacctatgagcagtttgttctcctccaagaaactgtaggtcgggacctcgaggt 731 Query: 238 tgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatg 297 || | || || || ||||| | ||| || || || ||||||||||| || ||||| |||| Sbjct: 730 tgaacggcgcagggcccttgcggatcctcccggatatgtcgtagtgggaaccatggcatg 671 Query: 298 ggcagaaccagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgc 357 ||||||||||||| || ||||| || ||| || || || |||||||| |||||||||| Sbjct: 670 ggcagaaccagccgccaaagtctccggcgttcggtagtgggatgcagccgaggtgagtgc 611 Query: 358 agacaccaatgacaacaagccactcagggttcttgacacgcaccgcatcct 408 | || |||||||| || |||||||| || ||||| |||||| | ||||||| Sbjct: 610 acacgccaatgaccaccagccactcgggattcttcacacgctctgcatcct 560
>gb|AY109584.1| Zea mays CL2436_1 mRNA sequence Length = 1746 Score = 127 bits (64), Expect = 3e-26 Identities = 187/228 (82%) Strand = Plus / Minus Query: 181 cttagccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggttgt 240 ||||||| || |||| |||||| |||||||| ||||||||||| |||||||| |||||| Sbjct: 1439 cttagcctatgagcagtttgttctcctccaagaaactgtaggtagggacctcgaggttga 1380 Query: 241 agggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggc 300 | || || || ||||| | ||| || || |||||||| ||||| || ||||| ||||||| Sbjct: 1379 acggcgcagggcccttgcggatcctcccggaaatgtcatagtgggaaccatggcatgggc 1320 Query: 301 agaaccagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgcaga 360 |||||||||| || ||||| || || || || || |||||||| ||||| ||||| | Sbjct: 1319 agaaccagccgccaaagtctccggcattaggtagtgggatgcagccgaggtgcgtgcaca 1260 Query: 361 caccaatgacaacaagccactcagggttcttgacacgcaccgcatcct 408 | |||||||| || ||||||||||||||||| |||||| | ||||||| Sbjct: 1259 cgccaatgaccaccagccactcagggttcttcacacgctctgcatcct 1212
>gb|M77224.1|MZERFESPA Zea mays mitochondrial Rieske Fe-S protein mRNA, complete cds Length = 1197 Score = 125 bits (63), Expect = 1e-25 Identities = 189/231 (81%) Strand = Plus / Minus Query: 178 gctcttagccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggt 237 |||||||||| | |||| |||||| |||||||| ||||||||||| |||||||| |||| Sbjct: 933 gctcttagcctacgagcagtttgttctcctccaagaaactgtaggtagggacctcgaggt 874 Query: 238 tgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatg 297 || | || || || ||||| | ||| || || |||||||| ||||| || ||||| |||| Sbjct: 873 tgaacggcgcagggcccttgcggatcctcccggaaatgtcatagtgggaaccatggcatg 814 Query: 298 ggcagaaccagccaccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgc 357 ||||||||||||| || ||||| || || || || || |||||||| ||||| |||| Sbjct: 813 ggcagaaccagccgccaaagtctccggcattaggtagtgggatgcagccgaggtgcgtgc 754 Query: 358 agacaccaatgacaacaagccactcagggttcttgacacgcaccgcatcct 408 | || |||||||| || ||||||||||||||||| |||||| | ||||||| Sbjct: 753 acacgccaatgaccaccagccactcagggttcttcacacgctctgcatcct 703
>ref|XM_472343.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 837 Score = 121 bits (61), Expect = 2e-24 Identities = 166/201 (82%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| |||||||| ||||||||||| ||||||||||||||| | || || || ||||| Sbjct: 821 ttgttctcctccaagaaactgtaggtagggacctccaggttgaatggagcggggcccttg 762 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaag 317 | || || || || ||||||||||| |||||||| || ||||||||||| || ||||| Sbjct: 761 cgaatcctgccagagatgtcgtagtgggagccatggcacgggcagaaccaacctccgaaa 702 Query: 318 tccccaaagttgggcaggggaatgcagcccaggtgagtgcagacaccaatgacaacaagc 377 || ||| ||||| || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 701 tctccagcattggggagaggaatgcaaccaaggtgggtgcagacgccaatgaccactagc 642 Query: 378 cactcagggttcttgacacgc 398 ||||| |||||||| |||||| Sbjct: 641 cactctgggttcttcacacgc 621
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 2e-24 Identities = 166/201 (82%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| |||||||| ||||||||||| ||||||||||||||| | || || || ||||| Sbjct: 19696244 ttgttctcctccaagaaactgtaggtagggacctccaggttgaatggagcggggcccttg 19696185 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaag 317 | || || || || ||||||||||| |||||||| || ||||||||||| || ||||| Sbjct: 19696184 cgaatcctgccagagatgtcgtagtgggagccatggcacgggcagaaccaacctccgaaa 19696125 Query: 318 tccccaaagttgggcaggggaatgcagcccaggtgagtgcagacaccaatgacaacaagc 377 || ||| ||||| || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 19696124 tctccagcattggggagaggaatgcaaccaaggtgggtgcagacgccaatgaccactagc 19696065 Query: 378 cactcagggttcttgacacgc 398 ||||| |||||||| |||||| Sbjct: 19696064 cactctgggttcttcacacgc 19696044
>dbj|AK059519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C04, full insert sequence Length = 1242 Score = 121 bits (61), Expect = 2e-24 Identities = 166/201 (82%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| |||||||| ||||||||||| ||||||||||||||| | || || || ||||| Sbjct: 950 ttgttctcctccaagaaactgtaggtagggacctccaggttgaatggagcggggcccttg 891 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaag 317 | || || || || ||||||||||| |||||||| || ||||||||||| || ||||| Sbjct: 890 cgaatcctgccagagatgtcgtagtgggagccatggcacgggcagaaccaacctccgaaa 831 Query: 318 tccccaaagttgggcaggggaatgcagcccaggtgagtgcagacaccaatgacaacaagc 377 || ||| ||||| || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 830 tctccagcattggggagaggaatgcaaccaaggtgggtgcagacgccaatgaccactagc 771 Query: 378 cactcagggttcttgacacgc 398 ||||| |||||||| |||||| Sbjct: 770 cactctgggttcttcacacgc 750
>gb|AY105531.1| Zea mays PCO113958 mRNA sequence Length = 1217 Score = 121 bits (61), Expect = 2e-24 Identities = 163/197 (82%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| || ||||| || ||||| ||||| || ||||||||| |||| || || ||||| Sbjct: 946 ttgttctcttccaagaagctgtatgtcggcacttccaggttgaagggtgccgggcccttg 887 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaag 317 | ||| ||||| |||||||||||||| ||||| || || ||||||||||||||||| ||| Sbjct: 886 cggatcctaccagaaatgtcgtagtgcgagccgtggcacgggcagaaccagccaccaaag 827 Query: 318 tccccaaagttgggcaggggaatgcagcccaggtgagtgcagacaccaatgacaacaagc 377 || || || || || || ||||||||||||||||||||||| |||||||| || ||| Sbjct: 826 tctcctgcattagggagcgggatgcagcccaggtgagtgcagaccccaatgacgaccagc 767 Query: 378 cactcagggttcttgac 394 || || ||||||||||| Sbjct: 766 cattcggggttcttgac 750
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 121 bits (61), Expect = 2e-24 Identities = 166/201 (82%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| |||||||| ||||||||||| ||||||||||||||| | || || || ||||| Sbjct: 146970 ttgttctcctccaagaaactgtaggtagggacctccaggttgaatggagcggggcccttg 146911 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaag 317 | || || || || ||||||||||| |||||||| || ||||||||||| || ||||| Sbjct: 146910 cgaatcctgccagagatgtcgtagtgggagccatggcacgggcagaaccaacctccgaaa 146851 Query: 318 tccccaaagttgggcaggggaatgcagcccaggtgagtgcagacaccaatgacaacaagc 377 || ||| ||||| || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 146850 tctccagcattggggagaggaatgcaaccaaggtgggtgcagacgccaatgaccactagc 146791 Query: 378 cactcagggttcttgacacgc 398 ||||| |||||||| |||||| Sbjct: 146790 cactctgggttcttcacacgc 146770
>gb|BT017520.1| Zea mays clone EL01N0421A02.c mRNA sequence Length = 1172 Score = 117 bits (59), Expect = 3e-23 Identities = 170/207 (82%) Strand = Plus / Minus Query: 192 agcattttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggt 251 |||| |||||| |||||||| |||||||||||||||||||| |||||| | ||||| || Sbjct: 888 agcagtttgttctcctccaagaaactgtaggtcgggacctcgaggttgaacggggcaggg 829 Query: 252 cccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagcca 311 ||||| | ||| || || || |||| |||||| || ||||| ||||||||||||||||| Sbjct: 828 cccttgcggatcctcccggatatgtagtagtgggaaccatggcatgggcagaaccagccg 769 Query: 312 ccgaagtccccaaagttgggcaggggaatgcagcccaggtgagtgcagacaccaatgaca 371 || ||||| || ||| || || || ||||| || ||||||||||| || |||||||| Sbjct: 768 ccaaagtctccggcgttcggtagtgggatgcaaccgaggtgagtgcacacgccaatgacc 709 Query: 372 acaagccactcagggttcttgacacgc 398 || |||||||| || ||||| |||||| Sbjct: 708 accagccactcgggattcttcacacgc 682
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaag 317 ||||||||||| ||||| |||||||| || || || |||||||||||||||||||| ||| Sbjct: 508736 ctgattctaccggaaatatcgtagtgggaaccgtggcatgggcagaaccagccaccaaag 508677 Query: 318 tc 319 || Sbjct: 508676 tc 508675
>ref|NM_210148.1| Eremothecium gossypii AEL067Wp (AEL067W), mRNA Length = 639 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaag 317 ||||||||||| ||||| |||||||| || || || |||||||||||||||||||| ||| Sbjct: 566 ctgattctaccggaaatatcgtagtgggaaccgtggcatgggcagaaccagccaccaaag 507 Query: 318 tc 319 || Sbjct: 506 tc 505
>ref|XM_447387.1| Candida glabrata CBS138 hypothetical protein (CAGL0I03190g) partial mRNA Length = 642 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 246 gctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaac 305 ||||| ||||| || |||||||| || || |||||||| || || ||||| ||||||||| Sbjct: 581 gctgggccctttctaattctaccagagatatcgtagtgagaaccgtgacaagggcagaac 522 Query: 306 cagccaccgaagtc 319 || ||||||||||| Sbjct: 521 caaccaccgaagtc 508
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 246 gctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaac 305 ||||| ||||| || |||||||| || || |||||||| || || ||||| ||||||||| Sbjct: 274042 gctgggccctttctaattctaccagagatatcgtagtgagaaccgtgacaagggcagaac 274101 Query: 306 cagccaccgaagtc 319 || ||||||||||| Sbjct: 274102 caaccaccgaagtc 274115
>dbj|D21116.1|RICSS126 Oryza sativa mRNA for Rieske Fe-S protein, partial sequence Length = 299 Score = 60.0 bits (30), Expect = 6e-06 Identities = 61/72 (84%) Strand = Plus / Minus Query: 327 ttgggcaggggaatgcagcccaggtgagtgcagacaccaatgacaacaagccactcaggg 386 ||||| || |||||||| || ||||| |||||||| | |||||| || |||||||| ||| Sbjct: 287 ttggggagaggaatgcaaccaaggtgggtgcagacgcnaatgaccactagccactctggg 228 Query: 387 ttcttgacacgc 398 ||||| |||||| Sbjct: 227 ttcttnacacgc 216
>gb|AY558341.1| Saccharomyces cerevisiae clone FLH111526.01X YEL024W gene, complete cds Length = 648 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 241 agggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggc 300 ||||||| |||||||| ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 592 agggggcaggtccctttctgattctaccggaaatatcataatgtgaaccatggcaaggac 533 Query: 301 agaaccagccacc 313 ||||||| ||||| Sbjct: 532 agaaccaaccacc 520
>gb|U18530.1|SCE9871 Saccharomyces cerevisiae chromosome V cosmids 9871, 8199, 9867, 9495 and lambda clones 6693 and 5898 Length = 62643 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 241 agggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggc 300 ||||||| |||||||| ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 18257 agggggcaggtccctttctgattctaccggaaatatcataatgtgaaccatggcaaggac 18198 Query: 301 agaaccagccacc 313 ||||||| ||||| Sbjct: 18197 agaaccaaccacc 18185
>gb|M24500.1|YSCRIP1A S.cerevisiae Rieske iron-sulfur protein (RIP1) gene, complete cds Length = 1238 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 241 agggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggc 300 ||||||| |||||||| ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 914 agggggcaggtccctttctgattctaccggaaatatcataatgtgaaccatggcaaggac 855 Query: 301 agaaccagccacc 313 ||||||| ||||| Sbjct: 854 agaaccaaccacc 842
>gb|M23316.1|YSCRIP1 Yeast (S.cerevisiae; DC5) Rieske iron-sulfur protein gene, complete cds Length = 1238 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 241 agggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggc 300 ||||||| |||||||| ||||||||||| ||||| || || ||||| ||||| || || | Sbjct: 914 agggggcaggtccctttctgattctaccggaaatatcataatgtgaaccatggcaaggac 855 Query: 301 agaaccagccacc 313 ||||||| ||||| Sbjct: 854 agaaccaaccacc 842
>gb|L16811.1|TOBFESB Nicotiana tabacum clone 8.8 Rieske iron-sulfur protein mRNA, complete cds; mitochondrial Length = 1202 Score = 56.0 bits (28), Expect = 9e-05 Identities = 94/116 (81%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| ||||||| ||||||||||| || |||||||| || || || || ||||| || Sbjct: 906 ttgttctcctccatgaaactgtaggtaggcacctccagattatatggtgcaggtcctttg 847 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 | || ||||| || ||||| ||||| |||||||| |||||||| ||||| ||||| Sbjct: 846 cgaatcctaccagagatgtcatagtgggagccatggcatgggcaaaaccaaccacc 791
>gb|DQ207870.1| Solanum tuberosum clone 087E11 rieske iron-sulfur protein-like mRNA, complete cds Length = 1098 Score = 56.0 bits (28), Expect = 9e-05 Identities = 94/116 (81%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| || ||||| ||||||||||| || |||||||| || || || || ||||| || Sbjct: 840 ttgttctcttccaagaaactgtaggtaggcacctccagattatacggtgcgggtcctttg 781 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 | || ||||| || |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 780 cgaatcctaccagagatgtcgtaatgggagccatggcatgggcaaaaccaaccacc 725
>gb|BT014059.1| Lycopersicon esculentum clone 133157F, mRNA sequence Length = 1087 Score = 56.0 bits (28), Expect = 9e-05 Identities = 94/116 (81%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| || ||||| ||||||||||| || |||||||| || || || || ||||| || Sbjct: 852 ttgttctcttccaagaaactgtaggtaggcacctccagattatacggtgcgggtcctttg 793 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 | || ||||| || |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 792 cgaatcctaccagagatgtcgtaatgagagccatggcatgggcaaaaccaaccacc 737
>tpg|BK005644.1| TPA: TPA_inf: Triticum aestivum histidine-containing phosphotransfer protein 2 (HP) mRNA, complete cds Length = 1212 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 178 gctcttagccgataagcattttgttatcctccaaaaaactgtaggtcgggacctccaggt 237 |||||||||| || ||||| |||||||| ||||| ||||||||||| || ||||| |||| Sbjct: 291 gctcttagcctatgagcatcttgttatcttccaagaaactgtaggtgggcacctcaaggt 350
>ref|XM_454973.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E22682g predicted mRNA Length = 642 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 246 gctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaac 305 ||||| ||||| ||||||||||| || || ||||| || || || |||||||| |||||| Sbjct: 581 gctggaccctttctgattctaccggagatatcgtaatgggaaccgtgacatggacagaac 522 Query: 306 cagccaccgaa 316 || |||||||| Sbjct: 521 caaccaccgaa 511
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 246 gctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaac 305 ||||| ||||| ||||||||||| || || ||||| || || || |||||||| |||||| Sbjct: 2014752 gctggaccctttctgattctaccggagatatcgtaatgggaaccgtgacatggacagaac 2014693 Query: 306 cagccaccgaa 316 || |||||||| Sbjct: 2014692 caaccaccgaa 2014682
>gb|AY682089.1| Sinorhizobium meliloti strain GR4 plasmid pRmeGR4a RepC (repC) locus, partial sequence Length = 6728 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 274 tgtcgtagtgtgagccatgacatgggcagaaccagccaccgaagtc 319 |||||||||| || || ||||| |||||||||||||| |||||||| Sbjct: 334 tgtcgtagtgcgacccgtgacaggggcagaaccagccgccgaagtc 379
>gb|AE005720.1| Caulobacter crescentus CB15 section 46 of 359 of the complete genome Length = 11816 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 274 tgtcgtagtgtgagccatgacatgggcagaaccagccaccgaagtc 319 |||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 5536 tgtcgtagtgcgagccgtggcaggggcagaaccagccgccgaagtc 5491
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 274 tgtcgtagtgtgagccatgacatgggcagaaccagccaccgaagtc 319 |||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct: 331091 tgtcatagtgagagccgtggcaggggcagaaccagccaccgaagtc 331046
>ref|XM_654818.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2306.2), mRNA Length = 717 Score = 50.1 bits (25), Expect = 0.006 Identities = 64/77 (83%) Strand = Plus / Minus Query: 243 ggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcag 302 ||||| ||||||||||| || | || || || |||||||| || ||||| || |||||| Sbjct: 656 ggggcgggtcccttcctaatacggccggagatatcgtagtgcgaaccatggcaggggcag 597 Query: 303 aaccagccaccgaagtc 319 |||||||| |||||||| Sbjct: 596 aaccagccgccgaagtc 580
>gb|L16813.1|TOBFESD Nicotiana tabacum clone 32.10 Rieske iron-sulfur protein mRNA, complete cds; mitochondrial Length = 1121 Score = 48.1 bits (24), Expect = 0.023 Identities = 93/116 (80%) Strand = Plus / Minus Query: 198 ttgttatcctccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttc 257 ||||| ||||||| ||||||||||| || |||||||| || || || || ||||| || Sbjct: 890 ttgttctcctccatgaaactgtaggtaggcacctccagattatatggcgcaggtcctttg 831 Query: 258 ctgattctacctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 | || ||||| || ||||| ||||| || ||||| |||||||| ||||| ||||| Sbjct: 830 cgaatcctaccagagatgtcatagtgggaaccatggcatgggcaaaaccaaccacc 775
>emb|AJ719669.1| Gallus gallus mRNA for hypothetical protein, clone 5b19 Length = 1070 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 218 gtaggtcgggacctccaggttgtagggggctggtcccttcctgattct 265 |||||| || ||||||||||| |||||||| || || ||||||||||| Sbjct: 845 gtaggttggaacctccaggttatagggggcaggacctttcctgattct 798
>ref|NM_001005843.1| Gallus gallus ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (UQCRFS1), mRNA Length = 1070 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 218 gtaggtcgggacctccaggttgtagggggctggtcccttcctgattct 265 |||||| || ||||||||||| |||||||| || || ||||||||||| Sbjct: 845 gtaggttggaacctccaggttatagggggcaggacctttcctgattct 798
>ref|NM_121347.3| Arabidopsis thaliana oxidoreductase/ ubiquinol-cytochrome-c reductase AT5G13440 mRNA, complete cds Length = 1286 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Minus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 959 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 900 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 899 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 853
>emb|CR694520.2|CNS0FYUC Tetraodon nigroviridis full-length cDNA Length = 895 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 742 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 683 Query: 288 ccatgacatgggcag 302 |||||||| |||||| Sbjct: 682 ccatgacaagggcag 668
>emb|CR688114.2|CNS0FTWE Tetraodon nigroviridis full-length cDNA Length = 893 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 740 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 681 Query: 288 ccatgacatgggcag 302 |||||||| |||||| Sbjct: 680 ccatgacaagggcag 666
>emb|CR680631.2|CNS0FO4J Tetraodon nigroviridis full-length cDNA Length = 894 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 741 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 682 Query: 288 ccatgacatgggcag 302 |||||||| |||||| Sbjct: 681 ccatgacaagggcag 667
>emb|CR678563.2|CNS0FMJ3 Tetraodon nigroviridis full-length cDNA Length = 895 Score = 46.1 bits (23), Expect = 0.090 Identities = 59/71 (83%) Strand = Plus / Minus Query: 225 gggacctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgt 284 ||||||||||||||| ||| || || ||||| || ||||| |||||| |||||||| Sbjct: 745 gggacctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgg 686 Query: 285 gagccatgaca 295 ||||||||||| Sbjct: 685 gagccatgaca 675
>emb|CR669499.2|CNS0FFK1 Tetraodon nigroviridis full-length cDNA Length = 897 Score = 46.1 bits (23), Expect = 0.090 Identities = 59/71 (83%) Strand = Plus / Minus Query: 225 gggacctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgt 284 ||||||||||||||| ||| || || ||||| || ||||| |||||| |||||||| Sbjct: 747 gggacctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgg 688 Query: 285 gagccatgaca 295 ||||||||||| Sbjct: 687 gagccatgaca 677
>emb|CR666574.2|CNS0FDAS Tetraodon nigroviridis full-length cDNA Length = 908 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 755 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 696 Query: 288 ccatgacatgggcag 302 |||||||| |||||| Sbjct: 695 ccatgacaagggcag 681
>emb|CR663722.2|CNS0FB3K Tetraodon nigroviridis full-length cDNA Length = 908 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 755 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 696 Query: 288 ccatgacatgggcag 302 |||||||| |||||| Sbjct: 695 ccatgacaagggcag 681
>emb|CR658916.2|CNS0F7E2 Tetraodon nigroviridis full-length cDNA Length = 895 Score = 46.1 bits (23), Expect = 0.090 Identities = 62/75 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 742 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 683 Query: 288 ccatgacatgggcag 302 |||||||| |||||| Sbjct: 682 ccatgacaagggcag 668
>emb|CR649347.2|CNS0F009 Tetraodon nigroviridis full-length cDNA Length = 930 Score = 46.1 bits (23), Expect = 0.090 Identities = 59/71 (83%) Strand = Plus / Minus Query: 225 gggacctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgt 284 ||||||||||||||| ||| || || ||||| || ||||| |||||| |||||||| Sbjct: 775 gggacctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgg 716 Query: 285 gagccatgaca 295 ||||||||||| Sbjct: 715 gagccatgaca 705
>emb|AL163572.1|ATT22N19 Arabidopsis thaliana DNA chromosome 5, BAC clone T22N19 (ESSA project) Length = 68948 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Plus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 51620 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 51679 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 51680 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 51726
>gb|AY081510.1| Arabidopsis thaliana ubiquinol--cytochrome-c reductase-like protein (At5g13440) mRNA, complete cds Length = 932 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Minus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 800 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 741 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 740 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 694
>dbj|AK221169.1| Arabidopsis thaliana mRNA for ubiquinol--cytochrome-c reductase -like protein, partial cds, clone: RAFL22-96-P11 Length = 800 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Minus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 518 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 459 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 458 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 412
>emb|AL116266.1|CNS01D1U Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 270 gaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 ||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct: 335 gaaatatcgtagtgggaaccgtgacatgggcagaaccatcctccgaa 289
>emb|AL114037.1|CNS01BBX Botrytis cinerea strain T4 cDNA library Length = 480 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 270 gaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 ||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct: 239 gaaatatcgtagtgggaaccgtgacatgggcagaaccatcctccgaa 193
>emb|AL113155.1|CNS01ANF Botrytis cinerea strain T4 cDNA library Length = 780 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 270 gaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 ||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct: 348 gaaatatcgtagtgggaaccgtgacatgggcagaaccatcctccgaa 302
>emb|AL111908.1|CNS019OS Botrytis cinerea strain T4 cDNA library Length = 480 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 270 gaaatgtcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 ||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct: 226 gaaatatcgtagtgggaaccgtgacatgggcagaaccatcctccgaa 180
>gb|AF370533.1|AF370533 Arabidopsis thaliana ubiquinol--cytochrome-c reductase-like protein (T22N19_90) mRNA, complete cds Length = 1080 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Minus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 856 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 797 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 796 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 750
>emb|BX829960.1|CNS0A1KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1003 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Minus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 815 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 756 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 755 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 709
>emb|BX830982.1|CNS0A0P7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1231 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Minus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 904 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 845 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 844 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 798
>gb|AY086148.1| Arabidopsis thaliana clone 21819 mRNA, complete sequence Length = 1226 Score = 46.1 bits (23), Expect = 0.090 Identities = 86/107 (80%) Strand = Plus / Minus Query: 207 tccaaaaaactgtaggtcgggacctccaggttgtagggggctggtcccttcctgattcta 266 ||||| || ||||||||||| || ||||||||||| || || || || ||||| ||||| Sbjct: 960 tccaagaagctgtaggtcggtacttccaggttgtatggtgcaggacctttcctaattctt 901 Query: 267 cctgaaatgtcgtagtgtgagccatgacatgggcagaaccagccacc 313 || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct: 900 ccagatatatcgtaatgtgatccgtgacacggacaaaaccaaccacc 854
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.090 Identities = 38/43 (88%) Strand = Plus / Plus Query: 274 tgtcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 ||||||| || |||||||| || |||||||||||||| ||||| Sbjct: 2177358 tgtcgtactgcgagccatggcacgggcagaaccagccgccgaa 2177400
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 274 tgtcgtagtgtgagccatgacatgggcagaaccagccaccgaagtc 319 |||||||||| || || || || |||||||||||||| |||||||| Sbjct: 3174549 tgtcgtagtgcgatccgtggcaggggcagaaccagcccccgaagtc 3174594
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 274 tgtcgtagtgtgagccatgacatgggcagaaccagccaccgaagtc 319 |||||||||| ||||| || || || ||||||||||| |||||||| Sbjct: 193695 tgtcgtagtgcgagccgtggcagggacagaaccagccgccgaagtc 193740
>emb|X56157.1|RSFBCOPER R. sphaeroides fbc operon for cytochrome bc1 complex reductase (EC 1.10.2.2) Length = 3381 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Minus Query: 274 tgtcgtagtgtgagccatgacatgggcagaaccagccaccgaagtc 319 |||||||||| || || || || |||||||||||||| |||||||| Sbjct: 751 tgtcgtagtgcgatccgtggcaggggcagaaccagcccccgaagtc 706
>ref|NM_213086.1| Danio rerio ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (uqcrfs1), mRNA Length = 1028 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 342 cagcccaggtgagtgcagacaccaatgac 370 |||||||| || ||||||||||||||||| Sbjct: 679 cagcccagatgggtgcagacaccaatgac 651
>ref|XM_957255.1| Neurospora crassa OR74A hypothetical protein (NCU06606.1) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 1.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 243 ggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcag 302 ||||| ||||| |||||||| | || || || |||||||| || || || || |||||| Sbjct: 635 ggggcaggtcctttcctgatacggccagagatatcgtagtgagaaccgtggcaagggcag 576 Query: 303 aaccagccaccgaagtc 319 |||||||||||| |||| Sbjct: 575 aaccagccaccgtagtc 559
>gb|BC067544.1| Danio rerio ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, mRNA (cDNA clone MGC:85614 IMAGE:6524377), complete cds Length = 1582 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 342 cagcccaggtgagtgcagacaccaatgac 370 |||||||| || ||||||||||||||||| Sbjct: 705 cagcccagatgggtgcagacaccaatgac 677
>ref|XM_326460.1| Neurospora crassa OR74A hypothetical protein (NCU06606.1) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 1.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 243 ggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcag 302 ||||| ||||| |||||||| | || || || |||||||| || || || || |||||| Sbjct: 635 ggggcaggtcctttcctgatacggccagagatatcgtagtgagaaccgtggcaagggcag 576 Query: 303 aaccagccaccgaagtc 319 |||||||||||| |||| Sbjct: 575 aaccagccaccgtagtc 559
>gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome 15, complete sequence Length = 169842 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cagtcagtgctcttagccgat 190 ||||||||||||||||||||| Sbjct: 130792 cagtcagtgctcttagccgat 130812
>gb|AC161199.4| Mus musculus chromosome 15, clone RP23-383D13, complete sequence Length = 218523 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cagtcagtgctcttagccgat 190 ||||||||||||||||||||| Sbjct: 161981 cagtcagtgctcttagccgat 161961
>ref|XM_748490.1| Aspergillus fumigatus Af293 ubiquinol-cytochrome c reductase iron-sulfur subunit precursor (Afu5g10610) partial mRNA Length = 897 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 cagcccaggtgagtgcagacaccaa 366 ||||| ||||||||||||||||||| Sbjct: 737 cagccaaggtgagtgcagacaccaa 713
>gb|AC123065.3| Mus musculus BAC clone RP23-239F13 from 9, complete sequence Length = 158137 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 cagtcagtgctcttagccgataagc 194 ||||||||||||||| ||||||||| Sbjct: 98803 cagtcagtgctcttaaccgataagc 98779
>gb|AC138714.4| Mus musculus chromosome 18 clone RP23-406C12, complete sequence Length = 191928 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cagtcagtgctcttagccgat 190 ||||||||||||||||||||| Sbjct: 62708 cagtcagtgctcttagccgat 62688
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 ggaatgcagcccaggtgagtgcaga 360 ||||||||||| ||||||||||||| Sbjct: 1467269 ggaatgcagccaaggtgagtgcaga 1467245
>emb|X05630.1|RCPETG Rhodopseudomonas capsulata petABC operon Length = 4007 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 276 tcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 1213 tcgtagtgcgagccgtggcaggggcagaaccagccgccgaa 1173
>emb|X03476.1|RCFBC Rhodopseudomonas sphaeroides fbc operon (fbcF, fbcB, fbcC genes) Length = 3874 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 276 tcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 |||||||| ||||| || || |||||||||||||| ||||| Sbjct: 1324 tcgtagtgcgagccgtggcaggggcagaaccagccgccgaa 1284
>emb|X02472.1|NCCYRFES Neurospora gene for mitochondrial ubiquinol-cytochrome c reductase iron-sulfur subunit Length = 1790 Score = 42.1 bits (21), Expect = 1.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 243 ggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcag 302 ||||| ||||| |||||||| | || || || |||||||| || || || || |||||| Sbjct: 1424 ggggcaggtcctttcctgatacggccagagatatcgtagtgagaaccgtggcaagggcag 1365 Query: 303 aaccagccaccgaagtc 319 |||||||||||| |||| Sbjct: 1364 aaccagccaccgtagtc 1348
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 ggtcgggacctccaggttgta 241 ||||||||||||||||||||| Sbjct: 4912 ggtcgggacctccaggttgta 4932
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 ggtcgggacctccaggttgta 241 ||||||||||||||||||||| Sbjct: 298182 ggtcgggacctccaggttgta 298202
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 ggtcgggacctccaggttgta 241 ||||||||||||||||||||| Sbjct: 71849 ggtcgggacctccaggttgta 71829
>gb|BC059475.1| Danio rerio ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1, mRNA (cDNA clone MGC:73109 IMAGE:4786975), complete cds Length = 1028 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 342 cagcccaggtgagtgcagacaccaatgac 370 |||||||| || ||||||||||||||||| Sbjct: 679 cagcccagatgggtgcagacaccaatgac 651
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 42.1 bits (21), Expect = 1.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 243 ggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagccatgacatgggcag 302 ||||| || ||||||||||| | || || ||||||||||| || || || || |||||| Sbjct: 1276830 ggggcaggacccttcctgatacggccggagatgtcgtagtgagaaccgtggcaggggcag 1276771 Query: 303 aaccagccaccgaagtc 319 |||||||| || ||||| Sbjct: 1276770 aaccagccgccaaagtc 1276754
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 276 tcgtagtgtgagccatgacatgggcagaaccagccaccgaa 316 |||||||| || ||||| || |||||||||||||| ||||| Sbjct: 4489656 tcgtagtgcgatccatggcacgggcagaaccagccgccgaa 4489616
>gb|AC153145.4| Mus musculus BAC clone RP23-222C3 from chromosome 18, complete sequence Length = 193382 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cagtcagtgctcttagccgat 190 ||||||||||||||||||||| Sbjct: 62701 cagtcagtgctcttagccgat 62681
>gb|AF332860.1|AF332860S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 3 and 4 Length = 147968 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cagtcagtgctcttagccgat 190 ||||||||||||||||||||| Sbjct: 87693 cagtcagtgctcttagccgat 87713
>gb|AC122441.6| Mus musculus BAC clone RP24-225A21 from chromosome 8, complete sequence Length = 177689 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 cagtcagtgctcttagccgataagc 194 ||||||||||||||| ||||||||| Sbjct: 151045 cagtcagtgctcttaaccgataagc 151069
>gb|AC147636.3| Mus musculus BAC clone RP23-201C3 from 9, complete sequence Length = 202197 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 cagtcagtgctcttagccgataagc 194 ||||||||||||||| ||||||||| Sbjct: 78478 cagtcagtgctcttaaccgataagc 78454
>emb|BX005081.6| Zebrafish DNA sequence from clone CH211-69M16 in linkage group 7, complete sequence Length = 168607 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 cagcccaggtgagtgcagacaccaatgac 370 |||||||| || ||||||||||||||||| Sbjct: 35045 cagcccagatgggtgcagacaccaatgac 35073
>gb|AC147989.4| Mus musculus BAC clone RP24-468I14 from 18, complete sequence Length = 204168 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cagtcagtgctcttagccgat 190 ||||||||||||||||||||| Sbjct: 28143 cagtcagtgctcttagccgat 28163
>emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chromosome 2, complete sequence Length = 211456 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 cagtcagtgctcttagccgataagc 194 ||||||||||||||||||| ||||| Sbjct: 173193 cagtcagtgctcttagccgctaagc 173169
>emb|AL831722.8| Mouse DNA sequence from clone RP23-312D15 on chromosome X, complete sequence Length = 148564 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cagtcagtgctcttagccgat 190 ||||||||||||||||||||| Sbjct: 72055 cagtcagtgctcttagccgat 72075
>emb|AL589873.11| Mouse DNA sequence from clone RP23-120P1 on chromosome 2, complete sequence Length = 170936 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 cagtcagtgctcttagccgataagc 194 ||||||||||||||| ||||||||| Sbjct: 48697 cagtcagtgctcttaaccgataagc 48721
>gb|AC111093.10| Mus musculus chromosome 3, clone RP23-170E22, complete sequence Length = 201202 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aaaaaggtgaattatcaaac 130 |||||||||||||||||||| Sbjct: 91299 aaaaaggtgaattatcaaac 91280
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence Length = 219218 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gttgggcaggggaatgcagc 345 |||||||||||||||||||| Sbjct: 120529 gttgggcaggggaatgcagc 120510
>gb|AC165975.4| Mus musculus BAC clone RP23-3L23 from chromosome 5, complete sequence Length = 259091 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 caccataggattcatcctac 170 |||||||||||||||||||| Sbjct: 144101 caccataggattcatcctac 144082
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence Length = 206735 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 gttgggcaggggaatgcagc 345 |||||||||||||||||||| Sbjct: 152930 gttgggcaggggaatgcagc 152949
>gb|AC164647.3| Mus musculus BAC clone RP23-463P13 from chromosome 16, complete sequence Length = 181953 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 132808 acagtcagtgctcttagccg 132827
>gb|AC159290.2| Mus musculus BAC clone RP23-291I2 from chromosome 13, complete sequence Length = 231853 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 tcctacagtcagtgctctta 184 |||||||||||||||||||| Sbjct: 76136 tcctacagtcagtgctctta 76155
>gb|AC104918.13| Mus musculus chromosome 7, clone RP23-335G1, complete sequence Length = 204099 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cagtcagtgctcttagccga 189 |||||||||||||||||||| Sbjct: 98778 cagtcagtgctcttagccga 98797
>ref|NM_027429.1| Mus musculus RIKEN cDNA 2610300B10 gene (2610300B10Rik), mRNA Length = 4262 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 agtcagtgctcttagccgataagc 194 |||||||||||||||||| ||||| Sbjct: 2215 agtcagtgctcttagccgctaagc 2238
>gb|AC123747.26| Mus musculus chromosome 3, clone RP24-123I12, complete sequence Length = 188946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 143128 acagtcagtgctcttagccg 143109
>gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosome 14, complete sequence Length = 205141 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ttcctgattctacctgaaat 274 |||||||||||||||||||| Sbjct: 136815 ttcctgattctacctgaaat 136834
>gb|AC144797.2| Mus musculus BAC clone RP24-349B2 from chromosome 16, complete sequence Length = 129045 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 85850 acagtcagtgctcttagccg 85831
>gb|AC127421.3| Mus musculus BAC clone RP24-314F1 from chromosome 18, complete sequence Length = 170221 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 164919 acagtcagtgctcttagccg 164938
>gb|AC116998.3| Mus musculus BAC clone RP23-16F6 from 18, complete sequence Length = 216959 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 156297 acagtcagtgctcttagccg 156316
>gb|BC060191.1| Mus musculus RIKEN cDNA 2610300B10 gene, mRNA (cDNA clone IMAGE:6833993), partial cds Length = 4371 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 agtcagtgctcttagccgataagc 194 |||||||||||||||||| ||||| Sbjct: 2281 agtcagtgctcttagccgctaagc 2304
>emb|CR733371.2|CNS0GSO4 Tetraodon nigroviridis full-length cDNA Length = 895 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 742 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 683 Query: 288 ccatgaca 295 |||||||| Sbjct: 682 ccatgaca 675
>emb|CR711566.2|CNS0GBZU Tetraodon nigroviridis full-length cDNA Length = 895 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 742 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 683 Query: 288 ccatgaca 295 |||||||| Sbjct: 682 ccatgaca 675
>gb|AC098725.3| Mus musculus BAC clone RP23-3D20 from 3, complete sequence Length = 234471 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 62918 acagtcagtgctcttagccg 62899
>emb|CR710666.2|CNS0GBAU Tetraodon nigroviridis full-length cDNA Length = 893 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 741 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 682 Query: 288 ccatgaca 295 |||||||| Sbjct: 681 ccatgaca 674
>emb|CR700080.2|CNS0G34S Tetraodon nigroviridis full-length cDNA Length = 905 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 752 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 693 Query: 288 ccatgaca 295 |||||||| Sbjct: 692 ccatgaca 685
>emb|CR695835.2|CNS0FZUV Tetraodon nigroviridis full-length cDNA Length = 895 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 742 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 683 Query: 288 ccatgaca 295 |||||||| Sbjct: 682 ccatgaca 675
>emb|CR694780.2|CNS0FZ1K Tetraodon nigroviridis full-length cDNA Length = 904 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 752 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 693 Query: 288 ccatgaca 295 |||||||| Sbjct: 692 ccatgaca 685
>emb|CR692486.2|CNS0FX9U Tetraodon nigroviridis full-length cDNA Length = 904 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 751 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 692 Query: 288 ccatgaca 295 |||||||| Sbjct: 691 ccatgaca 684
>emb|CR677652.2|CNS0FLU5 Tetraodon nigroviridis full-length cDNA Length = 901 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 750 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 691 Query: 288 ccatgaca 295 |||||||| Sbjct: 690 ccatgaca 683
>emb|CR674860.2|CNS0FJOY Tetraodon nigroviridis full-length cDNA Length = 895 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 742 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 683 Query: 288 ccatgaca 295 |||||||| Sbjct: 682 ccatgaca 675
>emb|CR661489.2|CNS0F9DJ Tetraodon nigroviridis full-length cDNA Length = 894 Score = 40.1 bits (20), Expect = 5.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 228 acctccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgag 287 |||||||||||| ||| || || ||||| || ||||| |||||| |||||||| ||| Sbjct: 741 acctccaggttgaggggagcagggccctttcttattcttcctgaagcatcgtagtgggag 682 Query: 288 ccatgaca 295 |||||||| Sbjct: 681 ccatgaca 674
>gb|AC138640.7| Mus musculus chromosome 1, clone RP23-463G19, complete sequence Length = 167384 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 agtcagtgctcttagccgataagc 194 |||||||||||||||||| ||||| Sbjct: 105811 agtcagtgctcttagccgctaagc 105788
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gagccatgacatgggcagaa 304 |||||||||||||||||||| Sbjct: 1943120 gagccatgacatgggcagaa 1943101
>emb|AL162232.14| Human DNA sequence from clone RP11-20A20 on chromosome 9 Contains a novel gene, complete sequence Length = 64241 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctggaaattgattaataatg 20 |||||||||||||||||||| Sbjct: 52791 ctggaaattgattaataatg 52810
>emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chromosome Xq21.2-22.2, complete sequence Length = 140757 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aaattgattaataatgccaa 24 |||||||||||||||||||| Sbjct: 39187 aaattgattaataatgccaa 39168
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ttttgttatcctccaaaaaa 215 |||||||||||||||||||| Sbjct: 2765639 ttttgttatcctccaaaaaa 2765658
>emb|AL022104.2|SPBC16H5 S.pombe chromosome II cosmid c16H5 Length = 35660 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 351 tgagtgcagacaccaatgacaacaagccactc 382 ||||| ||||||||||| | |||||||||||| Sbjct: 20424 tgagtacagacaccaatcataacaagccactc 20455
>emb|AL672178.8| Mouse DNA sequence from clone RP23-328O2 on chromosome 11 Contains part of a novel gene, complete sequence Length = 19104 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 12039 acagtcagtgctcttagccg 12020
>gb|DQ122922.1| Chlamydomonas incerta mitochondrial ubiquinol-cytochrome c oxidoreductase (RisP) mRNA, partial cds; nuclear gene for mitochondrial product Length = 921 Score = 40.1 bits (20), Expect = 5.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 231 tccaggttgtagggggctggtcccttcctgattctacctgaaatgtcgtagtgtgagcca 290 ||||||||||||||||| || |||| || || | || |||||||||||||| ||| Sbjct: 587 tccaggttgtagggggcggggccctcccgaatgcggcccgaaatgtcgtagtggctgccg 528 Query: 291 tgacatgggcagaaccagcc 310 || || |||||||||||||| Sbjct: 527 tggcaggggcagaaccagcc 508
>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence Length = 186105 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 51881 acagtcagtgctcttagccg 51862
>dbj|AP000379.1| Homo sapiens genomic DNA, chromosome 9p21, proximal p16CDKN2A locus Length = 169261 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctggaaattgattaataatg 20 |||||||||||||||||||| Sbjct: 74179 ctggaaattgattaataatg 74198
>dbj|AK154611.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101E21 product:hypothetical protein, full insert sequence Length = 4262 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 agtcagtgctcttagccgataagc 194 |||||||||||||||||| ||||| Sbjct: 2215 agtcagtgctcttagccgctaagc 2238
>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240079 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 28146 acagtcagtgctcttagccg 28165
>ref|NM_001021849.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC16H5.06), partial mRNA Length = 687 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 351 tgagtgcagacaccaatgacaacaagccactc 382 ||||| ||||||||||| | |||||||||||| Sbjct: 521 tgagtacagacaccaatcataacaagccactc 490
>dbj|AK028960.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732474I19 product:RIKEN cDNA 2610300B10 gene, full insert sequence Length = 2951 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 agtcagtgctcttagccgataagc 194 |||||||||||||||||| ||||| Sbjct: 508 agtcagtgctcttagccgctaagc 531
>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203418 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 16675 acagtcagtgctcttagccg 16656
>gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complete sequence Length = 210232 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 acacaaatgacagcacagca 152 |||||||||||||||||||| Sbjct: 81345 acacaaatgacagcacagca 81326
>gb|AC146977.22| Mus musculus chromosome 13, clone RP23-106I12, complete sequence Length = 200131 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tcctacagtcagtgctctta 184 |||||||||||||||||||| Sbjct: 61086 tcctacagtcagtgctctta 61067
>emb|BX537301.12| Mouse DNA sequence from clone RP23-127O5 on chromosome 4, complete sequence Length = 103179 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 cagtcagtgctcttagccgataag 193 ||||||||||||||| |||||||| Sbjct: 27710 cagtcagtgctcttaaccgataag 27687
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gagccatgacatgggcagaa 304 |||||||||||||||||||| Sbjct: 2498559 gagccatgacatgggcagaa 2498578
>emb|CT030172.10| Mouse DNA sequence from clone RP23-313L22 on chromosome 13, complete sequence Length = 228833 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tcctacagtcagtgctctta 184 |||||||||||||||||||| Sbjct: 185728 tcctacagtcagtgctctta 185709
>gb|U40480.1|SPU40480 Schizosaccharomyces pombe Rieske iron-sulfur protein (Rip1) mRNA, complete cds Length = 746 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 351 tgagtgcagacaccaatgacaacaagccactc 382 ||||| ||||||||||| | |||||||||||| Sbjct: 575 tgagtacagacaccaatcataacaagccactc 544
>gb|AC174448.2| Mus musculus BAC clone RP23-204P24 from chromosome 16, complete sequence Length = 198814 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 22171 acagtcagtgctcttagccg 22152
>gb|AC117775.8| Mus musculus chromosome 16, clone RP24-535F23, complete sequence Length = 127815 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 89006 acagtcagtgctcttagccg 89025
>emb|CT030722.6| Mouse DNA sequence from clone RP23-191N15 on chromosome 13, complete sequence Length = 187837 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tcctacagtcagtgctctta 184 |||||||||||||||||||| Sbjct: 30145 tcctacagtcagtgctctta 30126
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 129588 acagtcagtgctcttagccg 129569
>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence Length = 238892 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 192644 acagtcagtgctcttagccg 192625
>gb|AC138719.4| Mus musculus BAC clone RP23-178O8 from 10, complete sequence Length = 183689 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 158624 acagtcagtgctcttagccg 158605
>gb|AC140410.3| Mus musculus BAC clone RP23-141J11 from 10, complete sequence Length = 205197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 16454 acagtcagtgctcttagccg 16435
>emb|AL672278.12| Mouse DNA sequence from clone RP23-465H23 on chromosome 16, complete sequence Length = 187418 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 35879 acagtcagtgctcttagccg 35898
>emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chromosome X, complete sequence Length = 203581 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acagtcagtgctcttagccg 188 |||||||||||||||||||| Sbjct: 132688 acagtcagtgctcttagccg 132707 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,661,727 Number of Sequences: 3902068 Number of extensions: 3661727 Number of successful extensions: 119598 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 118945 Number of HSP's gapped (non-prelim): 651 length of query: 415 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 393 effective length of database: 17,147,199,772 effective search space: 6738849510396 effective search space used: 6738849510396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
