ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CTND1_XENLA (Q8AXM9) Catenin delta-1 (p120 catenin) (p120(ctn)) ... 29 8.5

>CTND1_XENLA (Q8AXM9) Catenin delta-1 (p120 catenin) (p120(ctn)) (Xp120(ctn))|
          Length = 859

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +3

Query: 378 LQPLLVLLR----HQHRDVRHWQPQEHSTQLETAAALEPGCFGL 497
           L+ ++ LLR    H HR++ H +    S Q  +A    P CFG+
Sbjct: 506 LENVVCLLRNISYHVHREIPHAEKYMESPQNASAETQNPSCFGV 549


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,534,146
Number of Sequences: 219361
Number of extensions: 586223
Number of successful extensions: 1630
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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