ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U12314.1|CCU12314 Cenchrus ciliaris clone PX7 peroxidase mRNA... 101 2e-18
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
3dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
4dbj|AK121950.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
5tpe|BN000615.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 96 1e-16
6tpe|BN000616.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 82 1e-12
7dbj|AK073833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
8tpe|BN000617.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 72 1e-09
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
10dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
11dbj|AK104645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
12dbj|AK067000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
13tpe|BN000558.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 70 6e-09
14dbj|AK108037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
15tpe|BN000559.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 60 5e-06
16gb|DQ317315.1| Musa acuminata putative peroxidase mRNA, partial cds 58 2e-05
17tpe|BN000557.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 50 0.005
18dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
19dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
20tpe|BN000554.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.32
21gb|AY021755.1| Oryza sativa microsatellite MRG4080 containing (T... 42 1.3
22gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, com... 42 1.3
23gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 4.9
24gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.9
25gb|AC147154.4| Pan troglodytes BAC clone CH251-175E24 from Y, co... 40 4.9
26gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, com... 40 4.9
27gb|AY392421.1| Streptomyces clavuligerus plasmid pSCL2 clone con... 40 4.9
28emb|AJ630649.1| Dicentrarchus labrax mRNA for cyclo-oxygenase-2 ... 40 4.9
29emb|BX649501.24| Zebrafish DNA sequence from clone DKEY-123F20 i... 40 4.9
30dbj|BS000682.1| Pan troglodytes chromosome Y clone: PTB-178C02, ... 40 4.9
31gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 4.9
32dbj|AK125586.1| Homo sapiens cDNA FLJ43598 fis, clone SMINT2017134 40 4.9
33gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, comp... 40 4.9
34emb|BX932712.2| Gallus gallus finished cDNA, clone ChEST497m3 40 4.9
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
36gb|AC151056.2| Pan troglodytes BAC clone CH251-310D9 from chromo... 40 4.9
37gb|AC156394.6| Mus musculus 6 BAC RP24-314D22 (Roswell Park Canc... 40 4.9
38gb|AY107804.1| Zea mays PCO104850 mRNA sequence 40 4.9
39gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chro... 40 4.9
40emb|CT485607.8| Mouse DNA sequence from clone RP23-157B3 on chro... 40 4.9 
>gb|U12314.1|CCU12314 Cenchrus ciliaris clone PX7 peroxidase mRNA, complete cds
          Length = 1335

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 305 gggctgctgctgtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctgg 364
           |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||
Sbjct: 878 gggctgctgctgtactgcctcaccagcgcgtcctgcgacccgccgttgaagagctcctgg 819

              
Query: 365 tcc 367
           |||
Sbjct: 818 tcc 816
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                            
Query: 207      tcctgcaattgagcctgacctccgtccgcgtcccgggcgacggcagcaggccgcccatct 266
                ||||||| |||||||||||||||||    || ||||  ||||||||||||  ||||||||
Sbjct: 20357841 tcctgcagttgagcctgacctccgtggcggtgccggaggacggcagcaggttgcccatct 20357900

                                                                            
Query: 267      tgagcatggccgtgacaaagtcggcggaaaactgcccggggctgctgctgtactgcctga 326
                ||| |||||| | ||| ||||||| ||| |||||   |||| || |||||||||||||||
Sbjct: 20357901 tgaccatggcggagacgaagtcggaggagaactgggaggggttggtgctgtactgcctga 20357960

                                                        
Query: 327      ccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
                | ||   ||||||||| ||||| ||||| |||||||||||
Sbjct: 20357961 cgaggccgtcctgcgagccgccattgaagagctcctggtc 20358000



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 122/149 (81%)
 Strand = Plus / Plus

                                                                            
Query: 218      agcctgacctccgtccgcgtcccgggcgacggcagcaggccgcccatcttgagcatggcc 277
                ||||||||||||||| ||||||||| || |||||  |||||||||||||| | ||| |||
Sbjct: 20342778 agcctgacctccgtcggcgtcccggccgccggcatgaggccgcccatcttcaccatcgcc 20342837

                                                                            
Query: 278      gtgacaaagtcggcggaaaactgcccggggctgctgctgtactgcctgaccagcgagtcc 337
                 || | |||||| |||  |||   |||| | | | |  ||||| ||| ||||||| ||||
Sbjct: 20342838 ttggcgaagtcgccggcgaacatgccggcgttcccggcgtacttcctcaccagcgcgtcc 20342897

                                             
Query: 338      tgcgacccgccgttgaaaagctcctggtc 366
                ||||||||||||||||| |||||||||||
Sbjct: 20342898 tgcgacccgccgttgaacagctcctggtc 20342926



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                            
Query: 223      gacctccgtccgcgtcccgggcgacggcagcaggccgcccatcttgagcatggccgtgac 282
                |||||| ||| ||||||||| || |||||| ||| |||||||| | | ||| ||| || |
Sbjct: 20328634 gacctcggtcggcgtcccggccgccggcaggagggcgcccatcctcaccatcgccttggc 20328693

                                                                            
Query: 283      aaagtcggcggaaaactgcccggggctgctgctgtactgcctgaccagcgagtcctgcga 342
                 ||||||||||  |||   |||| | ||| |  ||||| ||| ||||||| |||||||||
Sbjct: 20328694 gaagtcggcggcgaacatgccggcgttgccggcgtacttcctcaccagcgcgtcctgcga 20328753

                                        
Query: 343      cccgccgttgaaaagctcctggtc 366
                |||||||||||| |||||||||||
Sbjct: 20328754 cccgccgttgaacagctcctggtc 20328777
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>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016D02
          Length = 157822

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                         
Query: 207   tcctgcaattgagcctgacctccgtccgcgtcccgggcgacggcagcaggccgcccatct 266
             ||||||| |||||||||||||||||    || ||||  ||||||||||||  ||||||||
Sbjct: 81236 tcctgcagttgagcctgacctccgtggcggtgccggaggacggcagcaggttgcccatct 81295

                                                                         
Query: 267   tgagcatggccgtgacaaagtcggcggaaaactgcccggggctgctgctgtactgcctga 326
             ||| |||||| | ||| ||||||| ||| |||||   |||| || |||||||||||||||
Sbjct: 81296 tgaccatggcggagacgaagtcggaggagaactgggaggggttggtgctgtactgcctga 81355

                                                     
Query: 327   ccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
             | ||   ||||||||| ||||| ||||| |||||||||||
Sbjct: 81356 cgaggccgtcctgcgagccgccattgaagagctcctggtc 81395



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 122/149 (81%)
 Strand = Plus / Plus

                                                                         
Query: 218   agcctgacctccgtccgcgtcccgggcgacggcagcaggccgcccatcttgagcatggcc 277
             ||||||||||||||| ||||||||| || |||||  |||||||||||||| | ||| |||
Sbjct: 66173 agcctgacctccgtcggcgtcccggccgccggcatgaggccgcccatcttcaccatcgcc 66232

                                                                         
Query: 278   gtgacaaagtcggcggaaaactgcccggggctgctgctgtactgcctgaccagcgagtcc 337
              || | |||||| |||  |||   |||| | | | |  ||||| ||| ||||||| ||||
Sbjct: 66233 ttggcgaagtcgccggcgaacatgccggcgttcccggcgtacttcctcaccagcgcgtcc 66292

                                          
Query: 338   tgcgacccgccgttgaaaagctcctggtc 366
             ||||||||||||||||| |||||||||||
Sbjct: 66293 tgcgacccgccgttgaacagctcctggtc 66321



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 117/144 (81%)
 Strand = Plus / Plus

                                                                         
Query: 223   gacctccgtccgcgtcccgggcgacggcagcaggccgcccatcttgagcatggccgtgac 282
             |||||| ||| ||||||||| || |||||| ||| |||||||| | | ||| ||| || |
Sbjct: 52029 gacctcggtcggcgtcccggccgccggcaggagggcgcccatcctcaccatcgccttggc 52088

                                                                         
Query: 283   aaagtcggcggaaaactgcccggggctgctgctgtactgcctgaccagcgagtcctgcga 342
              ||||||||||  |||   |||| | ||| |  ||||| ||| ||||||| |||||||||
Sbjct: 52089 gaagtcggcggcgaacatgccggcgttgccggcgtacttcctcaccagcgcgtcctgcga 52148

                                     
Query: 343   cccgccgttgaaaagctcctggtc 366
             |||||||||||| |||||||||||
Sbjct: 52149 cccgccgttgaacagctcctggtc 52172
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>dbj|AK121950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J23, full
            insert sequence
          Length = 1345

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 207  tcctgcaattgagcctgacctccgtccgcgtcccgggcgacggcagcaggccgcccatct 266
            ||||||| |||||||||||||||||    || ||||  ||||||||||||  ||||||||
Sbjct: 1062 tcctgcagttgagcctgacctccgtggcggtgccggaggacggcagcaggttgcccatct 1003

                                                                        
Query: 267  tgagcatggccgtgacaaagtcggcggaaaactgcccggggctgctgctgtactgcctga 326
            ||| |||||| | ||| ||||||| ||| |||||   |||| || |||||||||||||||
Sbjct: 1002 tgaccatggcggagacgaagtcggaggagaactgggaggggttggtgctgtactgcctga 943

                                                    
Query: 327  ccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
            | ||   ||||||||| ||||| ||||| |||||||||||
Sbjct: 942  cgaggccgtcctgcgagccgccattgaagagctcctggtc 903
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>tpe|BN000615.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx86 gene for
            class III peroxidase 86 precursor, exons 1-3
          Length = 1188

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 207  tcctgcaattgagcctgacctccgtccgcgtcccgggcgacggcagcaggccgcccatct 266
            ||||||| |||||||||||||||||    || ||||  ||||||||||||  ||||||||
Sbjct: 1177 tcctgcagttgagcctgacctccgtggcggtgccggaggacggcagcaggttgcccatct 1118

                                                                        
Query: 267  tgagcatggccgtgacaaagtcggcggaaaactgcccggggctgctgctgtactgcctga 326
            ||| |||||| | ||| ||||||| ||| |||||   |||| || |||||||||||||||
Sbjct: 1117 tgaccatggcggagacgaagtcggaggagaactgggaggggttggtgctgtactgcctga 1058

                                                    
Query: 327  ccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
            | ||   ||||||||| ||||| ||||| |||||||||||
Sbjct: 1057 cgaggccgtcctgcgagccgccattgaagagctcctggtc 1018
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>tpe|BN000616.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx87 gene for
            class III peroxidase 87 precursor, exons 1-3
          Length = 1170

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 122/149 (81%)
 Strand = Plus / Minus

                                                                        
Query: 218  agcctgacctccgtccgcgtcccgggcgacggcagcaggccgcccatcttgagcatggcc 277
            ||||||||||||||| ||||||||| || |||||  |||||||||||||| | ||| |||
Sbjct: 1148 agcctgacctccgtcggcgtcccggccgccggcatgaggccgcccatcttcaccatcgcc 1089

                                                                        
Query: 278  gtgacaaagtcggcggaaaactgcccggggctgctgctgtactgcctgaccagcgagtcc 337
             || | |||||| |||  |||   |||| | | | |  ||||| ||| ||||||| ||||
Sbjct: 1088 ttggcgaagtcgccggcgaacatgccggcgttcccggcgtacttcctcaccagcgcgtcc 1029

                                         
Query: 338  tgcgacccgccgttgaaaagctcctggtc 366
            ||||||||||||||||| |||||||||||
Sbjct: 1028 tgcgacccgccgttgaacagctcctggtc 1000
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>dbj|AK073833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K09, full
            insert sequence
          Length = 1280

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                        
Query: 223  gacctccgtccgcgtcccgggcgacggcagcaggccgcccatcttgagcatggccgtgac 282
            |||||| ||| ||||||||| || |||||| ||| |||||||| | | ||| ||| || |
Sbjct: 1032 gacctcggtcggcgtcccggccgccggcaggagggcgcccatcctcaccatcgccttggc 973

                                                                        
Query: 283  aaagtcggcggaaaactgcccggggctgctgctgtactgcctgaccagcgagtcctgcga 342
             ||||||||||  |||   |||| | ||| |  ||||| ||| ||||||| |||||||||
Sbjct: 972  gaagtcggcggcgaacatgccggcgttgccggcgtacttcctcaccagcgcgtcctgcga 913

                                    
Query: 343  cccgccgttgaaaagctcctggtc 366
            |||||||||||| |||||||||||
Sbjct: 912  cccgccgttgaacagctcctggtc 889
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>tpe|BN000617.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx88 gene for
            class III peroxidase 88 precursor, exons 1-3
          Length = 1139

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                        
Query: 223  gacctccgtccgcgtcccgggcgacggcagcaggccgcccatcttgagcatggccgtgac 282
            |||||| ||| ||||||||| || |||||| ||| |||||||| | | ||| ||| || |
Sbjct: 1112 gacctcggtcggcgtcccggccgccggcaggagggcgcccatcctcaccatcgccttggc 1053

                                                                        
Query: 283  aaagtcggcggaaaactgcccggggctgctgctgtactgcctgaccagcgagtcctgcga 342
             ||||||||||  |||   |||| | ||| |  ||||| ||| ||||||| |||||||||
Sbjct: 1052 gaagtcggcggcgaacatgccggcgttgccggcgtacttcctcaccagcgcgtcctgcga 993

                                    
Query: 343  cccgccgttgaaaagctcctggtc 366
            |||||||||||| |||||||||||
Sbjct: 992  cccgccgttgaacagctcctggtc 969
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                  
Query: 316     gtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
               ||||||||| ||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 7948870 gtactgcctcaccagcgcgtcctgcgacccgccgttgaacagcacctggtc 7948820



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 313     gctgtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
               ||||||||||   ||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 7938580 gctgtactgctgcaccagcgcgtcctgcgagccgccgttgaagagctcctggtc 7938527



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 334     gtcctgcgacccgccgttgaaaagctcctggtc 366
               ||||||||| ||||||||||| |||||||||||
Sbjct: 7959939 gtcctgcgagccgccgttgaagagctcctggtc 7959907



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 197     tagttgggcctcctgcaattgagcctgacctccgtccgcgtcccgg 242
               ||||||||| ||| ||| |||||||||||||||  | |||||||||
Sbjct: 7770152 tagttgggcttccggcagttgagcctgacctccaccggcgtcccgg 7770107
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>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0082C09
          Length = 160665

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 316   gtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
             ||||||||| ||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 72285 gtactgcctcaccagcgcgtcctgcgacccgccgttgaacagcacctggtc 72235



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 313   gctgtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
             ||||||||||   ||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 61995 gctgtactgctgcaccagcgcgtcctgcgagccgccgttgaagagctcctggtc 61942



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 334   gtcctgcgacccgccgttgaaaagctcctggtc 366
             ||||||||| ||||||||||| |||||||||||
Sbjct: 83354 gtcctgcgagccgccgttgaagagctcctggtc 83322
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>dbj|AK104645.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G11, full
            insert sequence
          Length = 1228

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 316  gtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
            ||||||||| ||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 1011 gtactgcctcaccagcgcgtcctgcgacccgccgttgaacagcacctggtc 961
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>dbj|AK067000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I12, full
            insert sequence
          Length = 1239

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 316  gtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
            ||||||||| ||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 1011 gtactgcctcaccagcgcgtcctgcgacccgccgttgaacagcacctggtc 961
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>tpe|BN000558.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx29 gene for
            class III peroxidase 29 precursor, exons 1-3
          Length = 1184

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 316  gtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
            ||||||||| ||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 1064 gtactgcctcaccagcgcgtcctgcgacccgccgttgaacagcacctggtc 1014
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>dbj|AK108037.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C10, full
           insert sequence
          Length = 1326

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 313 gctgtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
           ||||||||||   ||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 996 gctgtactgctgcaccagcgcgtcctgcgagccgccgttgaagagctcctggtc 943
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>tpe|BN000559.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx30 gene for
           class III peroxidase 30 precursor, exons 1-2
          Length = 1059

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 313 gctgtactgcctgaccagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
           ||||||||||   ||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 936 gctgtactgctgcaccagcgcgtcctgcgagccgccgttgaagagctcctggtc 883
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>gb|DQ317315.1| Musa acuminata putative peroxidase mRNA, partial cds
          Length = 536

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 326 accagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
           |||| |||||||||||| ||||||||||| |||||||||||
Sbjct: 80  accaacgagtcctgcgagccgccgttgaagagctcctggtc 40
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>tpe|BN000557.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx28 gene for
            class III peroxidase 28 precursor, exons 1-3
          Length = 1203

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 334  gtcctgcgacccgccgttgaaaagctcctggtc 366
            ||||||||| ||||||||||| |||||||||||
Sbjct: 1059 gtcctgcgagccgccgttgaagagctcctggtc 1027
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>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1077_A12
          Length = 149089

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 197    tagttgggcctcctgcaattgagcctgacctccgtccgcgtcccgg 242
              ||||||||| ||| ||| |||||||||||||||  | |||||||||
Sbjct: 106417 tagttgggcttccggcagttgagcctgacctccaccggcgtcccgg 106372
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>dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0006L10
          Length = 171115

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 197   tagttgggcctcctgcaattgagcctgacctccgtccgcgtcccgg 242
             ||||||||| ||| ||| |||||||||||||||  | |||||||||
Sbjct: 10515 tagttgggcttccggcagttgagcctgacctccaccggcgtcccgg 10470
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>tpe|BN000554.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx25 gene for
            class III peroxidase 25 precursor, exon 1
          Length = 1017

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 197  tagttgggcctcctgcaattgagcctgacctccgtccgcgtcccgg 242
            ||||||||| ||| ||| |||||||||||||||  | |||||||||
Sbjct: 1016 tagttgggcttccggcagttgagcctgacctccaccggcgtcccgg 971
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>gb|AY021755.1| Oryza sativa microsatellite MRG4080 containing (TA)X35, closest to
           marker C2168, genomic sequence
          Length = 270

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 197 tagttgggcctcctgcaattgagcctgacctcc 229
           ||||||||| ||| ||| |||||||||||||||
Sbjct: 235 tagttgggcttccggcagttgagcctgacctcc 267
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>gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, complete cds
          Length = 1308

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 326 accagcgagtcctgcgacccgccgttgaaaagctcctggtc 366
           ||||||| |||||| || ||||||||||| ||| |||||||
Sbjct: 899 accagcgcgtcctgggagccgccgttgaagagcacctggtc 859
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 303     cggggctgctgctgtactgcctga 326
               ||||||||||||||| ||||||||
Sbjct: 2509385 cggggctgctgctgttctgcctga 2509408
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088I06, complete sequence
          Length = 187651

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   ggctgctgctgtactgcctg 325
             ||||||||||||||||||||
Sbjct: 90438 ggctgctgctgtactgcctg 90419
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>gb|AC147154.4| Pan troglodytes BAC clone CH251-175E24 from Y, complete sequence
          Length = 157260

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   aaccattattcagcacacttgtta 177
             |||||| |||||||||||||||||
Sbjct: 90281 aaccatgattcagcacacttgtta 90304
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>gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, complete sequence
          Length = 175034

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    aaccattattcagcacacttgtta 177
              |||||| |||||||||||||||||
Sbjct: 108045 aaccatgattcagcacacttgtta 108068
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>gb|AY392421.1| Streptomyces clavuligerus plasmid pSCL2 clone contig9.69, partial
           sequence
          Length = 3618

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 ggcgacggcagcaggccgcc 261
           ||||||||||||||||||||
Sbjct: 42  ggcgacggcagcaggccgcc 23
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>emb|AJ630649.1| Dicentrarchus labrax mRNA for cyclo-oxygenase-2 (cox-2 gene)
          Length = 2350

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 ccgccgttgaaaagctcctg 363
           ||||||||||||||||||||
Sbjct: 538 ccgccgttgaaaagctcctg 557
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>emb|BX649501.24| Zebrafish DNA sequence from clone DKEY-123F20 in linkage group 5,
              complete sequence
          Length = 194220

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    caaccattattcagcacact 172
              ||||||||||||||||||||
Sbjct: 188049 caaccattattcagcacact 188030
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>dbj|BS000682.1| Pan troglodytes chromosome Y clone: PTB-178C02, complete sequence
          Length = 222422

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    aaccattattcagcacacttgtta 177
              |||||| |||||||||||||||||
Sbjct: 221835 aaccatgattcagcacacttgtta 221812
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 154      aaccattattcagcacacttgtta 177
                |||||| |||||||||||||||||
Sbjct: 12627122 aaccatgattcagcacacttgtta 12627145



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 154     aaccattattcagcacacttgtta 177
               |||||| |||||||||||||||||
Sbjct: 5271490 aaccatgattcagcacacttgtta 5271467



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 154     aaccattattcagcacacttgtta 177
               |||||| |||||||||||||||||
Sbjct: 1616281 aaccatgattcagcacacttgtta 1616258
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>dbj|AK125586.1| Homo sapiens cDNA FLJ43598 fis, clone SMINT2017134
          Length = 1881

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gggcgacggcagcaggccgc 260
           ||||||||||||||||||||
Sbjct: 275 gggcgacggcagcaggccgc 256
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>gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, complete sequence
          Length = 186403

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   gggcgacggcagcaggccgc 260
             ||||||||||||||||||||
Sbjct: 17599 gggcgacggcagcaggccgc 17580
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>emb|BX932712.2| Gallus gallus finished cDNA, clone ChEST497m3
          Length = 626

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 gcagcaggccgcccatcttg 268
           ||||||||||||||||||||
Sbjct: 206 gcagcaggccgcccatcttg 187
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 306      ggctgctgctgtactgcctg 325
                ||||||||||||||||||||
Sbjct: 24021949 ggctgctgctgtactgcctg 24021930
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>gb|AC151056.2| Pan troglodytes BAC clone CH251-310D9 from chromosome y, complete
              sequence
          Length = 135628

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    aaccattattcagcacacttgtta 177
              |||||| |||||||||||||||||
Sbjct: 113280 aaccatgattcagcacacttgtta 113257
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>gb|AC156394.6| Mus musculus 6 BAC RP24-314D22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 171323

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 307   gctgctgctgtactgcctgaccag 330
             ||||||||||| ||||||||||||
Sbjct: 60830 gctgctgctgtgctgcctgaccag 60807
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>gb|AY107804.1| Zea mays PCO104850 mRNA sequence
          Length = 1303

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 344 ccgccgttgaaaagctcctggtcc 367
           ||||||||||| ||||||||||||
Sbjct: 928 ccgccgttgaagagctcctggtcc 905
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>gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chromosome y, complete
             sequence
          Length = 196073

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   aaccattattcagcacacttgtta 177
             |||||| |||||||||||||||||
Sbjct: 84454 aaccatgattcagcacacttgtta 84477
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>emb|CT485607.8| Mouse DNA sequence from clone RP23-157B3 on chromosome 9, complete
              sequence
          Length = 197959

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     attgtagcttgcaggttcac 44
              ||||||||||||||||||||
Sbjct: 166784 attgtagcttgcaggttcac 166803


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,305,424
Number of Sequences: 3902068
Number of extensions: 2305424
Number of successful extensions: 39713
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39571
Number of HSP's gapped (non-prelim): 138
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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