Clone Name | rbart36e01 |
---|---|
Clone Library Name | barley_pub |
>PPDK_GIALA (P51776) Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate,| orthophosphate dikinase) Length = 884 Score = 28.9 bits (63), Expect = 6.0 Identities = 15/49 (30%), Positives = 30/49 (61%) Frame = -3 Query: 398 IASVVILKAPLPLDGTRMLASCVTKEHSQEFARGMKEDLP*ASDFPLLD 252 +A+++ L P+PL T +CV + + + +G+KE++ AS+ LL+ Sbjct: 34 LAAMIKLGMPVPLGFTITCQTCVEYQKTASWPKGLKEEV--ASNLKLLE 80
>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130| (Serine-arginine-rich splicing regulatory protein 130) (SRrp130) (SR-rich protein) (SR-related protein) Length = 805 Score = 28.9 bits (63), Expect = 6.0 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = +1 Query: 205 NQTTVSAAPRREDLLRSSKGKSLAHGRSSFMPRANSCECSLVTQLASILVPSSGSGALRM 384 N+TT P++E + +G+S + SS P +NS S + ++S SS SG+ R Sbjct: 487 NETTSVLEPKKEHKEKEKQGRSRSGSSSSGSPSSNSRTSSTSSTVSSSSY-SSSSGSSRT 545 Query: 385 TTEA 396 ++ + Sbjct: 546 SSRS 549
>MAF_AVIS4 (P23091) Transforming protein Maf| Length = 369 Score = 28.5 bits (62), Expect = 7.9 Identities = 21/67 (31%), Positives = 29/67 (43%) Frame = +1 Query: 187 ISSNDINQTTVSAAPRREDLLRSSKGKSLAHGRSSFMPRANSCECSLVTQLASILVPSSG 366 ++ D+ + V P D + S G+ +A G S P S CS V S PS G Sbjct: 22 VNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM--STPCSSVPPSPSFSAPSPG 79 Query: 367 SGALRMT 387 SG + T Sbjct: 80 SGTDQKT 86
>MAF_HUMAN (O75444) Transcription factor Maf (Proto-oncogene c-maf)| Length = 403 Score = 28.5 bits (62), Expect = 7.9 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +1 Query: 187 ISSNDINQTTVSAAPRREDLLRSSKGKSLAHGRSSFMPRANSCECSLVTQLASILVPSSG 366 ++ D+ + V P D + S G+ +A G S P S CS V S PS G Sbjct: 22 VNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM--STPCSSVPPSPSFSAPSPG 79 Query: 367 SGA 375 SG+ Sbjct: 80 SGS 82
>KCC4_YEAST (P25389) Probable serine/threonine-protein kinase KCC4 (EC| 2.7.11.1) Length = 1037 Score = 28.5 bits (62), Expect = 7.9 Identities = 19/68 (27%), Positives = 33/68 (48%) Frame = +1 Query: 121 RNKVSTAKTRAAVHQNRYKYNNISSNDINQTTVSAAPRREDLLRSSKGKSLAHGRSSFMP 300 RNK+ K ++ ++ SS +N ++ + PRR R S+ S + RSSF+ Sbjct: 376 RNKIKKTKK----NKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLL 431 Query: 301 RANSCECS 324 +N + S Sbjct: 432 SSNPTDSS 439
>MAF_MOUSE (P54843) Transcription factor Maf (Proto-oncogene c-maf)| Length = 370 Score = 28.5 bits (62), Expect = 7.9 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +1 Query: 187 ISSNDINQTTVSAAPRREDLLRSSKGKSLAHGRSSFMPRANSCECSLVTQLASILVPSSG 366 ++ D+ + V P D + S G+ +A G S P S CS V S PS G Sbjct: 22 VNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM--STPCSSVPPSPSFSAPSPG 79 Query: 367 SGA 375 SG+ Sbjct: 80 SGS 82 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,351,061 Number of Sequences: 219361 Number of extensions: 816069 Number of successful extensions: 2509 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2461 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2509 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)