ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189610.2| Oryza sativa (japonica cultivar-group), mRNA 280 4e-72
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 280 4e-72
3dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic D... 280 4e-72
4dbj|AK110554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
5dbj|AK104360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
6dbj|AK098922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
7dbj|AK065320.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
8dbj|AK065131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
9dbj|AK061343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
10gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence 256 5e-65
11gb|AY110165.1| Zea mays CL20454_1 mRNA sequence 256 5e-65
12gb|AC145589.3| Mus musculus BAC clone RP24-174M10 from chromosom... 44 0.39
13gb|AC147621.3| Mus musculus BAC clone RP24-315M14 from chromosom... 44 0.39
14emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 44 0.39
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
16dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
17gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.5
18gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 42 1.5
19gb|AC090095.7| Homo sapiens, clone RP11-296C13, complete sequence 42 1.5
20gb|AC018443.9|AC018443 Homo sapiens chromosome 8, clone RP11-674... 42 1.5
21emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chro... 42 1.5
22ref|NM_179608.1| Arabidopsis thaliana unknown protein AT2G05810 ... 40 6.0
23ref|NM_126594.3| Arabidopsis thaliana unknown protein AT2G05810 ... 40 6.0
24ref|NM_117584.1| Arabidopsis thaliana unknown protein AT4G14970 ... 40 6.0
25ref|XM_480860.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
26gb|AC101776.7| Mus musculus chromosome 7, clone RP24-118K20, com... 40 6.0
27gb|BT015173.1| Arabidopsis thaliana At2g05810 gene, complete cds 40 6.0
28gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, co... 40 6.0
29gb|AC129605.4| Mus musculus BAC clone RP23-121N17 from chromosom... 40 6.0
30emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chrom... 40 6.0
31ref|XM_780646.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.0
32emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 6.0
33emb|AL773507.7| Mouse DNA sequence from clone RP23-322E14 on chr... 40 6.0
34gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer... 40 6.0
35gb|AY099770.1| Arabidopsis thaliana unknown protein (At2g05810) ... 40 6.0
36gb|AC006555.4| Arabidopsis thaliana chromosome 2 clone T17C22 ma... 40 6.0
37gb|AF439839.1|AF439839 Arabidopsis thaliana At2g05810/T17C22.4 m... 40 6.0
38dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
39emb|BX826737.1|CNS0A392 Arabidopsis thaliana Full-length cDNA Co... 40 6.0
40gb|AC140186.3| Mus musculus BAC clone RP24-363G9 from chromosome... 40 6.0
41dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
42dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
43gb|AC154417.2| Mus musculus BAC clone RP23-169H21 from 13, compl... 40 6.0
44emb|AL109662.3|CNS018OU Human chromosome 14 DNA sequence BAC R-1... 40 6.0
45emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in... 40 6.0
46emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 40 6.0
47gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 6.0
48gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.0
49dbj|D16207.1|RERAG Rhodococcus rhodochrous amidase gene 40 6.0 
>ref|NM_189610.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1581

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                        
Query: 276  tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
            |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 1330 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 1271

                                                                        
Query: 336  gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
            ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1270 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 1211

                                                                 
Query: 396  gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
            |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1210 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 1158
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                           
Query: 276     tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
               |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 4531603 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 4531544

                                                                           
Query: 336     gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
               ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4531543 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 4531484

                                                                    
Query: 396     gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
               |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 4531483 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 4531431
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>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510F03
          Length = 149699

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                         
Query: 276   tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
             |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 66290 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 66231

                                                                         
Query: 336   gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
             ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 66230 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 66171

                                                                  
Query: 396   gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
             |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 66170 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 66118
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>dbj|AK110554.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C05, full
           insert sequence
          Length = 1033

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Plus

                                                                       
Query: 276 tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
           |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 52  tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 111

                                                                       
Query: 336 gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
           ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 112 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 171

                                                                
Query: 396 gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 172 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 224
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>dbj|AK104360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C03, full
           insert sequence
          Length = 1097

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                       
Query: 276 tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
           |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 841 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 782

                                                                       
Query: 336 gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
           ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 781 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 722

                                                                
Query: 396 gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 721 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 669
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>dbj|AK098922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O23, full
            insert sequence
          Length = 1581

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                        
Query: 276  tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
            |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 1330 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 1271

                                                                        
Query: 336  gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
            ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1270 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 1211

                                                                 
Query: 396  gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
            |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1210 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 1158
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>dbj|AK065320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P13, full
            insert sequence
          Length = 2131

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                        
Query: 276  tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
            |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 1872 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 1813

                                                                        
Query: 336  gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
            ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1812 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 1753

                                                                 
Query: 396  gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
            |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1752 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 1700
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>dbj|AK065131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P14, full
            insert sequence
          Length = 1593

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                        
Query: 276  tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
            |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 1334 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 1275

                                                                        
Query: 336  gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
            ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1274 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 1215

                                                                 
Query: 396  gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
            |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 1214 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 1162
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>dbj|AK061343.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E05, full
           insert sequence
          Length = 1097

 Score =  280 bits (141), Expect = 4e-72
 Identities = 165/173 (95%)
 Strand = Plus / Minus

                                                                       
Query: 276 tcatggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgca 335
           |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||
Sbjct: 841 tcatggcaggtcctccttcatgccgcggacgaactcctccgagtgttccttggtgacgca 782

                                                                       
Query: 336 gctggcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggc 395
           ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 781 gctggcgagcatccgcgtgccgtcgagcggcagcggcgccttgaggatgacgacggaggc 722

                                                                
Query: 396 gatgaagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 721 gatgaagtcgttgttgacgagcgggccggcgaacttgggcgggccgaagccgt 669
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>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence
          Length = 138186

 Score =  256 bits (129), Expect = 5e-65
 Identities = 159/169 (94%)
 Strand = Plus / Plus

                                                                          
Query: 280    ggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgcagctg 339
              |||||||| ||||||||||| |||||||||||||  ||||| ||||||||||||||||||
Sbjct: 109542 ggcaggtcttccttcatgccacgggcgaactcctcggagtgttccttggtgacgcagctg 109601

                                                                          
Query: 340    gcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggcgatg 399
              |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 109602 gcgagcatcctggtgccgtcgagcgggagcggcgccttgaggaagacgacggaggcgatg 109661

                                                               
Query: 400    aagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
              |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 109662 aagtcgttgttgacgagcgggccggcgaagatgggcgggccgaagccgt 109710
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>gb|AY110165.1| Zea mays CL20454_1 mRNA sequence
          Length = 1000

 Score =  256 bits (129), Expect = 5e-65
 Identities = 159/169 (94%)
 Strand = Plus / Minus

                                                                       
Query: 280 ggcaggtcctccttcatgccgcgggcgaactcctgcgagtgctccttggtgacgcagctg 339
           |||||||| ||||||||||| |||||||||||||  ||||| ||||||||||||||||||
Sbjct: 735 ggcaggtcttccttcatgccacgggcgaactcctcggagtgttccttggtgacgcagctg 676

                                                                       
Query: 340 gcgagcatcctggtgccgtccagcggcagcggcgccttgaggatgacgacggaggcgatg 399
           |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 675 gcgagcatcctggtgccgtcgagcgggagcggcgccttgaggaagacgacggaggcgatg 616

                                                            
Query: 400 aagtcgttgttgacgagcggtccggcgaacatgggcgggccgaagccgt 448
           |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 615 aagtcgttgttgacgagcgggccggcgaagatgggcgggccgaagccgt 567
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>gb|AC145589.3| Mus musculus BAC clone RP24-174M10 from chromosome Y, complete sequence
          Length = 152506

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 22     aggtatatatcatttttattgt 43
              ||||||||||||||||||||||
Sbjct: 110711 aggtatatatcatttttattgt 110732
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>gb|AC147621.3| Mus musculus BAC clone RP24-315M14 from chromosome Y, complete
            sequence
          Length = 166529

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 22   aggtatatatcatttttattgt 43
            ||||||||||||||||||||||
Sbjct: 3538 aggtatatatcatttttattgt 3559
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 326     tggtgacgcagctggcgagcatcctggtgc 355
               ||||| |||||||||||| |||||||||||
Sbjct: 1944020 tggtgccgcagctggcgaccatcctggtgc 1944049
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                          
Query: 318      gtgctccttggtgacgcagctggcgagcatcctggtgccgtccagcggcagcggcgcc 375
                ||||||||||||||||||||| || |||| ||  |||||| | ||||||  |||||||
Sbjct: 22995873 gtgctccttggtgacgcagctcgccagcagccgcgtgccggcgagcggcgccggcgcc 22995930
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>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 318   gtgctccttggtgacgcagctggcgagcatcctggtgccgtccagcggcagcggcgcc 375
             ||||||||||||||||||||| || |||| ||  |||||| | ||||||  |||||||
Sbjct: 62417 gtgctccttggtgacgcagctcgccagcagccgcgtgccggcgagcggcgccggcgcc 62474
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>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940128D9, complete sequence
          Length = 128585

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 272    tcgctcatggcaggtcctcct 292
              |||||||||||||||||||||
Sbjct: 110083 tcgctcatggcaggtcctcct 110103
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>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete
             sequence
          Length = 196646

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 9     tataatcaaatacaggtatatatca 33
             ||||| |||||||||||||||||||
Sbjct: 68309 tataaccaaatacaggtatatatca 68285
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>gb|AC090095.7| Homo sapiens, clone RP11-296C13, complete sequence
          Length = 194074

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 13    atcaaatacaggtatatatcatttt 37
             ||||||||||||||||||| |||||
Sbjct: 26841 atcaaatacaggtatatattatttt 26865
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>gb|AC018443.9|AC018443 Homo sapiens chromosome 8, clone RP11-674A24, complete sequence
          Length = 199810

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 13    atcaaatacaggtatatatcatttt 37
             ||||||||||||||||||| |||||
Sbjct: 59836 atcaaatacaggtatatattatttt 59860
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>emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chromosome 2, complete
             sequence
          Length = 196421

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    ggtttctaataagaatagtaa 103
             |||||||||||||||||||||
Sbjct: 48607 ggtttctaataagaatagtaa 48587
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>ref|NM_179608.1| Arabidopsis thaliana unknown protein AT2G05810 transcript variant
            AT2G05810.2 mRNA, complete cds
          Length = 2015

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 386  cgacggaggcgatgaagtcgttgttgac 413
            |||||||||||  |||||||||||||||
Sbjct: 1607 cgacggaggcggcgaagtcgttgttgac 1634
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>ref|NM_126594.3| Arabidopsis thaliana unknown protein AT2G05810 transcript variant
            AT2G05810.1 mRNA, complete cds
          Length = 2282

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 386  cgacggaggcgatgaagtcgttgttgac 413
            |||||||||||  |||||||||||||||
Sbjct: 1607 cgacggaggcggcgaagtcgttgttgac 1634
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>ref|NM_117584.1| Arabidopsis thaliana unknown protein AT4G14970 mRNA, complete cds
          Length = 3861

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 tgaggatgacgacggaggcg 396
           ||||||||||||||||||||
Sbjct: 51  tgaggatgacgacggaggcg 32
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>ref|XM_480860.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 ggtgccgtccagcggcagcg 370
           ||||||||||||||||||||
Sbjct: 296 ggtgccgtccagcggcagcg 315
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>gb|AC101776.7| Mus musculus chromosome 7, clone RP24-118K20, complete sequence
          Length = 177972

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ggtatatatcatttttattg 42
             ||||||||||||||||||||
Sbjct: 46231 ggtatatatcatttttattg 46250
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>gb|BT015173.1| Arabidopsis thaliana At2g05810 gene, complete cds
          Length = 1743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 386  cgacggaggcgatgaagtcgttgttgac 413
            |||||||||||  |||||||||||||||
Sbjct: 1415 cgacggaggcggcgaagtcgttgttgac 1442
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>gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, complete sequence
          Length = 160759

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tatatcatttttattgtctc 46
             ||||||||||||||||||||
Sbjct: 99179 tatatcatttttattgtctc 99198
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>gb|AC129605.4| Mus musculus BAC clone RP23-121N17 from chromosome 7, complete
            sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   ggtatatatcatttttattg 42
            ||||||||||||||||||||
Sbjct: 4419 ggtatatatcatttttattg 4400
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>emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chromosome 10, complete
              sequence
          Length = 173310

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 112    tcaagatgtagaaacaaagtaagt 135
              ||||||||||||||||| ||||||
Sbjct: 142117 tcaagatgtagaaacaacgtaagt 142140
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>ref|XM_780646.1| PREDICTED: Strongylocentrotus purpuratus similar to
           phosphatidylinositol-4-phosphate 5-kinase, type II, beta
           (LOC580595), mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 245 ttctccggtccagcaaagggaagt 268
           |||||||||||||| |||||||||
Sbjct: 296 ttctccggtccagcgaagggaagt 319
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>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2
          Length = 202860

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    tgaggatgacgacggaggcg 396
              ||||||||||||||||||||
Sbjct: 118972 tgaggatgacgacggaggcg 118953
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>emb|AL773507.7| Mouse DNA sequence from clone RP23-322E14 on chromosome 4 Contains a
             phospholipase A2, group XIIA (Pla2g12) pseudogene,
             complete sequence
          Length = 200646

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     aatataatcaaatacaggtatata 30
             |||||||||||| |||||||||||
Sbjct: 71470 aatataatcaaacacaggtatata 71447
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>gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 118301

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    gtatatatcatttttattgt 43
             ||||||||||||||||||||
Sbjct: 43827 gtatatatcatttttattgt 43846
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>gb|AY099770.1| Arabidopsis thaliana unknown protein (At2g05810) mRNA, complete cds
          Length = 2109

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 386  cgacggaggcgatgaagtcgttgttgac 413
            |||||||||||  |||||||||||||||
Sbjct: 1462 cgacggaggcggcgaagtcgttgttgac 1489
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>gb|AC006555.4| Arabidopsis thaliana chromosome 2 clone T17C22 map ve013, complete
             sequence
          Length = 29078

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 386   cgacggaggcgatgaagtcgttgttgac 413
             |||||||||||  |||||||||||||||
Sbjct: 19488 cgacggaggcggcgaagtcgttgttgac 19461
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>gb|AF439839.1|AF439839 Arabidopsis thaliana At2g05810/T17C22.4 mRNA sequence
          Length = 1870

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 386  cgacggaggcgatgaagtcgttgttgac 413
            |||||||||||  |||||||||||||||
Sbjct: 1586 cgacggaggcggcgaagtcgttgttgac 1613
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 351     ggtgccgtccagcggcagcg 370
               ||||||||||||||||||||
Sbjct: 8267290 ggtgccgtccagcggcagcg 8267309
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>emb|BX826737.1|CNS0A392 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB59ZF06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1823

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 386 cgacggaggcgatgaagtcgttgttgac 413
           |||||||||||  |||||||||||||||
Sbjct: 284 cgacggaggcggcgaagtcgttgttgac 257
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>gb|AC140186.3| Mus musculus BAC clone RP24-363G9 from chromosome 16, complete sequence
          Length = 139767

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   agctggcgagcatcctggtg 354
             ||||||||||||||||||||
Sbjct: 30459 agctggcgagcatcctggtg 30478
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>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0682A06
          Length = 142023

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ggtgccgtccagcggcagcg 370
            ||||||||||||||||||||
Sbjct: 7399 ggtgccgtccagcggcagcg 7418
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>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_H02
          Length = 117860

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   ggtgccgtccagcggcagcg 370
             ||||||||||||||||||||
Sbjct: 99972 ggtgccgtccagcggcagcg 99991
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>gb|AC154417.2| Mus musculus BAC clone RP23-169H21 from 13, complete sequence
          Length = 233984

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     tatatcatttttattgtctc 46
              ||||||||||||||||||||
Sbjct: 205876 tatatcatttttattgtctc 205857
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>emb|AL109662.3|CNS018OU Human chromosome 14 DNA sequence BAC R-1053O12 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168176

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      aaatataatcaaatacaggtatat 29
              ||||||||| ||||||||||||||
Sbjct: 124677 aaatataatgaaatacaggtatat 124654
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>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21,
            complete sequence
          Length = 253718

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    aaatataatcaaatacaggt 25
            ||||||||||||||||||||
Sbjct: 8378 aaatataatcaaatacaggt 8359
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>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   tgaggatgacgacggaggcg 396
             ||||||||||||||||||||
Sbjct: 64426 tgaggatgacgacggaggcg 64407
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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 192     cagcaacgatatcaaccaaacaac 215
               |||||||| |||||||||||||||
Sbjct: 2431910 cagcaacgttatcaaccaaacaac 2431933
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>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940127D9, complete sequence
          Length = 102832

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   atcagcagctccacgacgcg 238
             ||||||||||||||||||||
Sbjct: 14131 atcagcagctccacgacgcg 14150
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>dbj|D16207.1|RERAG Rhodococcus rhodochrous amidase gene
          Length = 1958

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 cgtccagcggcagcggcgcc 375
           ||||||||||||||||||||
Sbjct: 728 cgtccagcggcagcggcgcc 747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,584,142
Number of Sequences: 3902068
Number of extensions: 3584142
Number of successful extensions: 77986
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77729
Number of HSP's gapped (non-prelim): 257
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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