Clone Name | rbart36d09 |
---|---|
Clone Library Name | barley_pub |
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWLE-----ASGDEVADPRLGGSFTSEGMKELVG 254 GV LLE+++GRE ++ P S W + + DE+ DP + G + +E + +V Sbjct: 785 GVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVE 844 Query: 253 LTLQCLSPSAVRRRPKMRLVAAELDRIL 170 + LQCL P + RP M + EL+ L Sbjct: 845 VALQCLEPYST-YRPCMVDIVRELEDAL 871 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = -1 Query: 480 YQDPEAHSLAQLSASSDVYSLGXXXXXXSLVGRPPAWFVQNQLNLSLIGW 331 Y DPE + QLS SDV+S G + GR P + ++ SL+ W Sbjct: 764 YLDPEYYKTQQLSEKSDVFSFG-VVLLEIVSGREPLNIKRPRVEWSLVEW 812
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not| make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWLE-----ASGDEVADPRLGGSFTSEGMKELVG 254 GV LLE+++GRE ++ P S W + + DE+ DP + G + +E + +V Sbjct: 786 GVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVE 845 Query: 253 LTLQCLSPSAVRRRPKMRLVAAELDRIL 170 + LQCL P + RP M + EL+ L Sbjct: 846 VALQCLEPYST-YRPCMVDIVRELEDAL 872 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = -1 Query: 480 YQDPEAHSLAQLSASSDVYSLGXXXXXXSLVGRPPAWFVQNQLNLSLIGW 331 Y DPE + QLS SDV+S G + GR P + ++ SL+ W Sbjct: 765 YLDPEYYKTQQLSEKSDVFSFG-VVLLEIVSGREPLNIKRPRIEWSLVEW 813
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 45.1 bits (105), Expect = 1e-04 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWL--EASG----DEVADPRLGGSFTSEGMKELV 257 GV LLE++TG A + P ES WL E S ++ D + G +T++ E+ Sbjct: 282 GVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMA 341 Query: 256 GLTLQCLSPSAVRRRPKMRLVAAELDRI 173 +TL C+ P + RP M+ V L+ I Sbjct: 342 RITLSCIEPDP-KNRPHMKEVVEVLEHI 368
>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein| kinase precursor (FLG22-induced receptor-like kinase 1) Length = 876 Score = 33.1 bits (74), Expect(2) = 2e-04 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%) Frame = -3 Query: 421 LGVFLLELITGREAASLVCPESTESFAH--WLEASGD--EVADPRLGGSFTSEGMKELVG 254 LGV LLE+ITG+ A + E H + A+GD + D RL + ++ Sbjct: 760 LGVVLLEVITGQPAIASSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDVGSAWKMSE 819 Query: 253 LTLQCLSPSAVRRRPKMRLVAAELDRILEKEMTLTTVMGDGTAIITL 113 + L C ++ +RP M V EL +I+ +T D T ++T+ Sbjct: 820 IALACTEHTSA-QRPTMSQVVMELKQIVYGIVTDQENYDDSTKMLTV 865 Score = 30.4 bits (67), Expect(2) = 2e-04 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -1 Query: 480 YQDPEAHSLAQLSASSDVYSLG 415 Y DPE +S Q++ SDVYSLG Sbjct: 740 YLDPEYYSTRQMNEKSDVYSLG 761
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 32.0 bits (71), Expect(2) = 0.001 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHW---LEASGD--EVADPRLGGSFTSEGMKELVG 254 GV LLE+++GR+A + E + W L +GD + DP L E +K++ Sbjct: 698 GVVLLEILSGRKAIDMQFEEG--NIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIAS 755 Query: 253 LTLQCLSPSAVRRRPKMRLVAAELDRIL 170 + +C+ + RP M V L+ L Sbjct: 756 VACKCVRMRG-KDRPSMDKVTTALEHAL 782 Score = 28.5 bits (62), Expect(2) = 0.001 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = -1 Query: 510 SPLNGFRSGV--YQDPEAHSLAQLSASSDVYSLG 415 +PL+ +G Y DPE + L L+ SDVYS G Sbjct: 665 TPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFG 698
>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)| (AvrPphB susceptible protein 1) Length = 456 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWLEASGDE------VADPRLGGSFTSEGMKELV 257 GV LELITGR+A P ++ W ++ +ADPRL G F + + + + Sbjct: 277 GVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQAL 336 Query: 256 GLTLQCLSPSAVRR 215 + C+ A R Sbjct: 337 AVASMCIQEQAATR 350
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 38.1 bits (87), Expect = 0.014 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWL------EASGDEVADPRLGGSFTSEGMKELV 257 GV LLEL++GR A P + W + V D RL ++ E ++ Sbjct: 267 GVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVA 326 Query: 256 GLTLQCLSPSAVRRRPKMRLVAAELDRI 173 L+L+CL+ + ++ RP M V + L+ I Sbjct: 327 TLSLRCLT-TEIKLRPNMSEVVSHLEHI 353
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 37.0 bits (84), Expect = 0.031 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWLEASGDE------VADPRLGGSFTSEGMKELV 257 GV LLEL++GR A P + W V DPRL G ++ ++ Sbjct: 267 GVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIA 326 Query: 256 GLTLQCLSPSAVRRRPKMRLVAAELDRI-LEKE 161 L L C+S A + RP M + ++ + ++KE Sbjct: 327 VLALDCISIDA-KSRPTMNEIVKTMEELHIQKE 358
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 36.6 bits (83), Expect = 0.041 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWL------EASGDEVADPRLGGSFTSEGMKELV 257 GV LLELITGR+A ++ W + ++ DP L G + G+ + + Sbjct: 294 GVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQAL 353 Query: 256 GLTLQCLSPSAVRRRPKMRLVAAEL 182 ++ C V+ +P MR V +++ Sbjct: 354 AISAMC-----VQEQPTMRPVVSDV 373
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 36.6 bits (83), Expect = 0.041 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Frame = -3 Query: 418 GVFLLELITGREAASL--VCPESTESFAHWL-----EASGDEVADPRLGGSFTSEGMKEL 260 GV LLELITG+ A L + + W+ E + + D L G++ E +++L Sbjct: 479 GVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL 538 Query: 259 VGLTLQCLSPSAVRRRPKMRLVAAELDRILEKEMTLTTVMGDGTA 125 + + L C + S+ RPKM +E+ R+LE GDG A Sbjct: 539 IQVALLC-TQSSPMERPKM----SEVVRMLE---------GDGLA 569
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 35.8 bits (81), Expect = 0.069 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWL------EASGDEVADPRLGGSFTSEGMKELV 257 GV LLE+++GR A P + W + V D RL ++ E ++ Sbjct: 268 GVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVA 327 Query: 256 GLTLQCLSPSAVRRRPKMRLVAAELDRI 173 L L+CL+ ++ RP M V + L+ I Sbjct: 328 TLALRCLT-FEIKLRPNMNEVVSHLEHI 354
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 35.0 bits (79), Expect = 0.12 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWLEASGDE-----VADPRLGGSFTSEGMKELVG 254 GV LLEL+TG++ + + A W+ + D+ V DP+L F E + +++ Sbjct: 885 GVVLLELVTGKQPTDSELGD--KDMAKWVCTALDKCGLEPVIDPKLDLKFKEE-ISKVIH 941 Query: 253 LTLQCLSPSAVRRRPKMRLVAAELDRI 173 + L C SP + RP MR V L + Sbjct: 942 IGLLCTSPLPL-NRPSMRKVVIMLQEV 967
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 34.3 bits (77), Expect = 0.20 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTESFAHWL-----EASGDEVADPRLGGSFTSEGMKELVG 254 GV LLEL+TGR + P + W+ E E+ DP + +E M ++ Sbjct: 932 GVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLE 991 Query: 253 LTLQCLSPSAVRRRPKMRLVA 191 + +CL + R +LV+ Sbjct: 992 IACRCLGENPKTRPTTQQLVS 1012
>EPHB5_CHICK (Q07497) Ephrin type-B receptor 5 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase CEK9) Length = 1002 Score = 28.5 bits (62), Expect(2) = 1.1 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -1 Query: 471 PEAHSLAQLSASSDVYSLGXXXXXXSLVGRPPAWFVQNQLNLSLIGWRHR 322 PEA + ++SSDV+S G G P W + NQ ++ I +R Sbjct: 811 PEAVQYRKFTSSSDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIDQDYR 860 Score = 21.9 bits (45), Expect(2) = 1.1 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = -3 Query: 253 LTLQCLSPSAVRRRPKMRLVAAELDRILEKEMTL 152 L L C V+R PK + + LD+++ K L Sbjct: 874 LMLDCWQKDRVQR-PKFEQIVSALDKMIRKPSAL 906
>CAJ1_YEAST (P39101) Protein CAJ1| Length = 391 Score = 30.8 bits (68), Expect = 2.2 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +2 Query: 101 ELAPEGDDGGAVAHDGR*CHLLLQDAVKLRRDQPHLGPPPHRRRAQTLQRQADQLLHAL 277 E A E DGG V HD L +D KL ++Q ++R + + +Q D+L L Sbjct: 131 EKADESTDGGMVKHDTNKAESLKKD--KLSKEQREKLMEMEKKRREDMMKQVDELAEKL 187
>EFG_PROMT (Q46IW3) Elongation factor G (EF-G)| Length = 691 Score = 30.4 bits (67), Expect = 2.9 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = +3 Query: 201 RILGRLLTADGLRHCNVRPTNSFMPSEVKLPPS-LGSATSSPDASS---Q*AKDSVDSGQ 368 +I G + DG++ CN M EV++P LGS D SS Q S++ GQ Sbjct: 579 KIAGSMAFKDGIKKCNPVLLEPMMKVEVEVPEDFLGSIIG--DLSSRRGQVEGQSIEDGQ 636 Query: 369 TKLAASLPV 395 +K+ + +P+ Sbjct: 637 SKVQSKVPL 645
>KPEL_DROME (Q05652) Probable serine/threonine-protein kinase pelle (EC| 2.7.11.1) Length = 501 Score = 26.9 bits (58), Expect(2) = 3.9 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 495 FRSGVYQDPEAHSLAQLSASSDVYSLG 415 F + +Y PE + QLS DVYS G Sbjct: 385 FGTKIYLPPEFRNFRQLSTGVDVYSFG 411 Score = 21.6 bits (44), Expect(2) = 3.9 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -3 Query: 418 GVFLLELITGREAASLVCPESTE 350 G+ LLE+ TGR+ V T+ Sbjct: 411 GIVLLEVFTGRQVTDRVPENETK 433
>EFG_PROMP (Q7UZY6) Elongation factor G (EF-G)| Length = 691 Score = 29.6 bits (65), Expect = 5.0 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +3 Query: 201 RILGRLLTADGLRHCNVRPTNSFMPSEVKLPPS-LGSATSSPDASS---Q*AKDSVDSGQ 368 +I G + DG++ CN M EV+ P LGS D SS Q SVD G Sbjct: 579 KIAGSMAFKDGVKKCNPVLLEPMMKVEVESPDDFLGSVIG--DLSSRRGQVEGQSVDDGL 636 Query: 369 TKLAASLPV 395 +K+ A +P+ Sbjct: 637 SKVQAKVPL 645
>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58| Length = 546 Score = 29.6 bits (65), Expect = 5.0 Identities = 22/76 (28%), Positives = 32/76 (42%) Frame = +3 Query: 195 TNRILGRLLTADGLRHCNVRPTNSFMPSEVKLPPSLGSATSSPDASSQ*AKDSVDSGQTK 374 TN +G A G RP + P PPS G+ATS+P + A S+ + Sbjct: 6 TNNAIGGATAATGAFAFGARPATTTAP-----PPSFGAATSTPTFGAAPATTSLFAA--- 57 Query: 375 LAASLPVMSSRRKTPS 422 A+ P + TP+ Sbjct: 58 -PAATPAFGAPAATPA 72
>SUHW3_MOUSE (Q6P3Y5) Suppressor of hairy wing homolog 3| Length = 742 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 6/71 (8%) Frame = +3 Query: 231 GLRHCNVRPTNSFMPSEVKLPPSLGSATSSPDASSQ*AKDSVDSG------QTKLAASLP 392 GL+H + NS P + K S+ +SSQ A S T S P Sbjct: 178 GLKHPSTSKVNSVNPKKPKTSASISETRPCSSSSSQTAPSGASSQTVLSNVNTSSVQSAP 237 Query: 393 VMSSRRKTPSC 425 SS R P C Sbjct: 238 GSSSLRSCPKC 248
>FA5_BOVIN (Q28107) Coagulation factor V precursor (Activated protein C| cofactor) [Contains: Coagulation factor V heavy chain; Coagulation factor V light chain] Length = 2211 Score = 29.3 bits (64), Expect = 6.5 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 273 PSEVKLPPSLGSATSSPDASSQ*AKDSVDSGQTKLAASL 389 PS+ L P LG SPD S + S D GQT L+ L Sbjct: 1319 PSQESLSPDLGQTALSPDPSQE--SLSPDLGQTSLSPDL 1355
>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)| Length = 1094 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/58 (25%), Positives = 22/58 (37%) Frame = +1 Query: 214 ASSPPTGSDTAXXXXXXXXXXXXXXXHQASGPPPRLPMPPANERKIQLILDKPSWRPP 387 A++ P+G D +A+ PPP P PP +Q + P PP Sbjct: 506 AAATPSGDDAQAPRVSTDSPSTAESIPEAASPPPPPPPPPPPLPNLQSQQEAPPSAPP 563
>EFG_SYNPX (Q7U4D2) Elongation factor G (EF-G)| Length = 690 Score = 28.9 bits (63), Expect = 8.5 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Frame = +3 Query: 201 RILGRLLTADGLRHCNVRPTNSFMPSEVKLPPS-LGSATSSPDASS---Q*AKDSVDSGQ 368 +I G + DG++ CN M EV++P LGS D SS Q V+ G Sbjct: 579 KIAGSMAFKDGVKKCNPVLLEPMMKVEVEVPEDFLGSIIG--DLSSRRGQVEGQGVEDGT 636 Query: 369 TKLAASLPV 395 +K++A +P+ Sbjct: 637 SKISAKVPL 645
>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A| (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (ATP-dependent chromatin remodelling protein) (Williams syndrome transcription factor-related chromatin remodeli Length = 1556 Score = 28.9 bits (63), Expect = 8.5 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +3 Query: 345 KDSVDSGQTKLAASLPVMSSRRKTPSCTRRCSQRAVPRNVPLDPGRRRNG 494 K S S +A+ L + S K RRC +R P P+ GRR +G Sbjct: 1383 KSSEQSRSVNIASKLSLQESESK-----RRCKKRQSPEPSPVTLGRRSSG 1427
>Y1673_SYNY3 (P74261) Hypothetical tRNA/rRNA methyltransferase slr1673 (EC| 2.1.1.-) Length = 274 Score = 28.9 bits (63), Expect = 8.5 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +2 Query: 185 LRRDQPHLGPPPHRRRAQTLQRQAD--QLLHALRGEAATKPRVRHLVSRCLQPMSER 349 L DQ PPPH R L+R D L LR AAT L + C+ P S + Sbjct: 106 LTMDQFWRSPPPHARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPK 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,855,194 Number of Sequences: 219361 Number of extensions: 1588453 Number of successful extensions: 6618 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 6122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6604 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)