ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190060.1| Oryza sativa (japonica cultivar-group), predic... 182 7e-43
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 182 7e-43
3dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 182 7e-43
4dbj|AK111919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
5gb|AY111538.1| Zea mays CL39286_1 mRNA sequence 137 4e-29
6gb|DQ454159.1| Paragonimus westermani phospholipid hydroperoxide... 42 1.7
7dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 42 1.7
8gb|AY112122.1| Zea mays CL62793_1 mRNA sequence 42 1.7
9ref|NM_126955.3| Arabidopsis thaliana ATSERK4; protein binding /... 40 6.9
10ref|NM_126956.3| Arabidopsis thaliana ATSERK5; ATP binding / pro... 40 6.9
11ref|NM_197350.1| Oryza sativa (japonica cultivar-group) putative... 40 6.9
12gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
13gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
14gb|AC147835.2| Xenopus tropicalis clone CH216-24N20, complete se... 40 6.9
15ref|XM_673303.1| Plasmodium berghei strain ANKA hypothetical pro... 40 6.9
16gb|BT010276.1| Drosophila melanogaster RE08772 full insert cDNA 40 6.9
17gb|AY056243.1| Arabidopsis thaliana unknown protein (At2g13780) ... 40 6.9
18gb|AC129029.7| Homo sapiens 12 BAC RP11-84D7 (Roswell Park Cance... 40 6.9
19gb|AC117377.9| Homo sapiens 12 BAC RP11-406H4 (Roswell Park Canc... 40 6.9
20gb|AY094412.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, co... 40 6.9
21ref|NM_138055.1| Drosophila melanogaster CG30419-RA (CG30419), mRNA 40 6.9
22gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 ma... 40 6.9
23gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 40 6.9
24emb|CR388979.1| Gallus gallus finished cDNA, clone ChEST325j8 40 6.9
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
27gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, r... 40 6.9
28emb|BX820053.1|CNS0AA0J Arabidopsis thaliana Full-length cDNA Co... 40 6.9
29emb|BX820947.1|CNS0A8M0 Arabidopsis thaliana Full-length cDNA Co... 40 6.9
30dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.9
31gb|AC112230.5| Homo sapiens BAC clone RP11-85D18 from 2, complet... 40 6.9
32dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.9
33ref|XM_310967.2| Anopheles gambiae str. PEST ENSANGP00000008105 ... 40 6.9
34gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70... 40 6.9
35gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, com... 40 6.9
36gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
37gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.9
38emb|CT030693.7| Mouse DNA sequence from clone RP24-109B11 on chr... 40 6.9
39gb|BT001116.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, co... 40 6.9 
>ref|NM_190060.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1155

 Score =  182 bits (92), Expect = 7e-43
 Identities = 193/226 (85%), Gaps = 3/226 (1%)
 Strand = Plus / Minus

                                                                        
Query: 93   gacgtgaagagctggctcccgagggtgatgatggcggtgccgtcgcccatgacggtcgtt 152
            ||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||| || 
Sbjct: 1151 gacgtgaagagctggctaccgagcgtgacaatggcggtgccgtcgcccatgacggtggtg 1092

                                                                        
Query: 153  agtgtcatctccttctccaggatgcggtcaagctccgccgcgaccaaccgcatcttgggc 212
            ||  |||||||||||||||| || ||||| ||||||||||||| || ||||||||| |||
Sbjct: 1091 aggctcatctccttctccagaatccggtcgagctccgccgcgatcagccgcatcttcggc 1032

                                                                        
Query: 213  cgcctcctcaccgccgacgggctcagacactgcaacgtcaggccgaccaactccttcatg 272
            ||||  ||   |||||||| ||| |  |||||||||||||| ||||||| ||||||||| 
Sbjct: 1031 cgccgtct---cgccgacgtgctgacgcactgcaacgtcagcccgaccagctccttcatc 975

                                                          
Query: 273  ccctccgaggtgaagctgccaccaagcctcgggtccgccacctcgt 318
            |||||||| ||||||||||| || | ||| || |||| ||||||||
Sbjct: 974  ccctccgacgtgaagctgcctcccaaccttggatccgtcacctcgt 929



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 83/94 (88%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                       
Query: 390 ccagtgatgagctcgagaagaaaaaccccaa-gctgtacacgtcgctgctcgcagagagc 448
           |||||||||||||| | |||||||||||||| ||||||||||||||||||  |||| |||
Sbjct: 848 ccagtgatgagctccaaaagaaaaaccccaaagctgtacacgtcgctgctttcagaaagc 789

                                             
Query: 449 tgtgccaaggaatgtgcctctggatcctggtaga 482
           || |||||||||||  ||||||| || |||||||
Sbjct: 788 tgcgccaaggaatgcacctctgggtcttggtaga 755
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  182 bits (92), Expect = 7e-43
 Identities = 193/226 (85%), Gaps = 3/226 (1%)
 Strand = Plus / Plus

                                                                            
Query: 93       gacgtgaagagctggctcccgagggtgatgatggcggtgccgtcgcccatgacggtcgtt 152
                ||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||| || 
Sbjct: 41072001 gacgtgaagagctggctaccgagcgtgacaatggcggtgccgtcgcccatgacggtggtg 41072060

                                                                            
Query: 153      agtgtcatctccttctccaggatgcggtcaagctccgccgcgaccaaccgcatcttgggc 212
                ||  |||||||||||||||| || ||||| ||||||||||||| || ||||||||| |||
Sbjct: 41072061 aggctcatctccttctccagaatccggtcgagctccgccgcgatcagccgcatcttcggc 41072120

                                                                            
Query: 213      cgcctcctcaccgccgacgggctcagacactgcaacgtcaggccgaccaactccttcatg 272
                ||||  ||   |||||||| ||| |  |||||||||||||| ||||||| ||||||||| 
Sbjct: 41072121 cgccgtct---cgccgacgtgctgacgcactgcaacgtcagcccgaccagctccttcatc 41072177

                                                              
Query: 273      ccctccgaggtgaagctgccaccaagcctcgggtccgccacctcgt 318
                |||||||| ||||||||||| || | ||| || |||| ||||||||
Sbjct: 41072178 ccctccgacgtgaagctgcctcccaaccttggatccgtcacctcgt 41072223



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                            
Query: 390      ccagtgatgagctcgagaagaaaaaccccaa-gctgtacacgtcgctgctcgcagagagc 448
                |||||||||||||| | |||||||||||||| ||||||||||||||||||  |||| |||
Sbjct: 41072442 ccagtgatgagctccaaaagaaaaaccccaaagctgtacacgtcgctgctttcagaaagc 41072501

                              
Query: 449      tgtgccaaggaatg 462
                || |||||||||||
Sbjct: 41072502 tgcgccaaggaatg 41072515
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>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492G09
          Length = 142239

 Score =  182 bits (92), Expect = 7e-43
 Identities = 193/226 (85%), Gaps = 3/226 (1%)
 Strand = Plus / Plus

                                                                          
Query: 93     gacgtgaagagctggctcccgagggtgatgatggcggtgccgtcgcccatgacggtcgtt 152
              ||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||| || 
Sbjct: 108931 gacgtgaagagctggctaccgagcgtgacaatggcggtgccgtcgcccatgacggtggtg 108990

                                                                          
Query: 153    agtgtcatctccttctccaggatgcggtcaagctccgccgcgaccaaccgcatcttgggc 212
              ||  |||||||||||||||| || ||||| ||||||||||||| || ||||||||| |||
Sbjct: 108991 aggctcatctccttctccagaatccggtcgagctccgccgcgatcagccgcatcttcggc 109050

                                                                          
Query: 213    cgcctcctcaccgccgacgggctcagacactgcaacgtcaggccgaccaactccttcatg 272
              ||||  ||   |||||||| ||| |  |||||||||||||| ||||||| ||||||||| 
Sbjct: 109051 cgccgtct---cgccgacgtgctgacgcactgcaacgtcagcccgaccagctccttcatc 109107

                                                            
Query: 273    ccctccgaggtgaagctgccaccaagcctcgggtccgccacctcgt 318
              |||||||| ||||||||||| || | ||| || |||| ||||||||
Sbjct: 109108 ccctccgacgtgaagctgcctcccaaccttggatccgtcacctcgt 109153



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                          
Query: 390    ccagtgatgagctcgagaagaaaaaccccaa-gctgtacacgtcgctgctcgcagagagc 448
              |||||||||||||| | |||||||||||||| ||||||||||||||||||  |||| |||
Sbjct: 109372 ccagtgatgagctccaaaagaaaaaccccaaagctgtacacgtcgctgctttcagaaagc 109431

                            
Query: 449    tgtgccaaggaatg 462
              || |||||||||||
Sbjct: 109432 tgcgccaaggaatg 109445
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>dbj|AK111919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D03, full
           insert sequence
          Length = 916

 Score =  182 bits (92), Expect = 7e-43
 Identities = 193/226 (85%), Gaps = 3/226 (1%)
 Strand = Plus / Minus

                                                                       
Query: 93  gacgtgaagagctggctcccgagggtgatgatggcggtgccgtcgcccatgacggtcgtt 152
           ||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||| || 
Sbjct: 761 gacgtgaagagctggctaccgagcgtgacaatggcggtgccgtcgcccatgacggtggtg 702

                                                                       
Query: 153 agtgtcatctccttctccaggatgcggtcaagctccgccgcgaccaaccgcatcttgggc 212
           ||  |||||||||||||||| || ||||| ||||||||||||| || ||||||||| |||
Sbjct: 701 aggctcatctccttctccagaatccggtcgagctccgccgcgatcagccgcatcttcggc 642

                                                                       
Query: 213 cgcctcctcaccgccgacgggctcagacactgcaacgtcaggccgaccaactccttcatg 272
           ||||  ||   |||||||| ||| |  |||||||||||||| ||||||| ||||||||| 
Sbjct: 641 cgccgtct---cgccgacgtgctgacgcactgcaacgtcagcccgaccagctccttcatc 585

                                                         
Query: 273 ccctccgaggtgaagctgccaccaagcctcgggtccgccacctcgt 318
           |||||||| ||||||||||| || | ||| || |||| ||||||||
Sbjct: 584 ccctccgacgtgaagctgcctcccaaccttggatccgtcacctcgt 539



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 83/94 (88%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                       
Query: 390 ccagtgatgagctcgagaagaaaaaccccaa-gctgtacacgtcgctgctcgcagagagc 448
           |||||||||||||| | |||||||||||||| ||||||||||||||||||  |||| |||
Sbjct: 458 ccagtgatgagctccaaaagaaaaaccccaaagctgtacacgtcgctgctttcagaaagc 399

                                             
Query: 449 tgtgccaaggaatgtgcctctggatcctggtaga 482
           || |||||||||||  ||||||| || |||||||
Sbjct: 398 tgcgccaaggaatgcacctctgggtcttggtaga 365
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>gb|AY111538.1| Zea mays CL39286_1 mRNA sequence
          Length = 586

 Score =  137 bits (69), Expect = 4e-29
 Identities = 130/149 (87%), Gaps = 6/149 (4%)
 Strand = Plus / Plus

                                                                       
Query: 93  gacgtgaagagctggctcccgagggtgatgatggcggtgccg---tcgcccatgacggtc 149
           ||||||||||||||||| ||||| |||| |||||||||||||   |||||||||||||| 
Sbjct: 312 gacgtgaagagctggctgccgagcgtgacgatggcggtgccgccgtcgcccatgacggtg 371

                                                                       
Query: 150 gttagtgtcatctccttctccaggatgcggtcaagctccgccgcgaccaaccgcatcttg 209
           || || | |||||||||||||||||| ||||| ||||||||||| |||| ||||||| ||
Sbjct: 372 gtcagggccatctccttctccaggatccggtccagctccgccgccaccagccgcatcctg 431

                                        
Query: 210 ggccgcctcctcaccgccgacgggctcag 238
           ||||||| |||   |||||||||||||||
Sbjct: 432 ggccgccgcct---cgccgacgggctcag 457



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 276 tccgaggtgaagctgccaccaagcctcgggtc 307
           |||||||||||||| || || |||||||||||
Sbjct: 495 tccgaggtgaagctccctcccagcctcgggtc 526
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>gb|DQ454159.1| Paragonimus westermani phospholipid hydroperoxide glutathione
            peroxidase isoform 1 (GPx1) gene, complete cds
          Length = 6559

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 194  gaccaaccgcatcttgggccg 214
            |||||||||||||||||||||
Sbjct: 5046 gaccaaccgcatcttgggccg 5066
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 16      tcattttcatgcaactaaagt 36
               |||||||||||||||||||||
Sbjct: 2183942 tcattttcatgcaactaaagt 2183962
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>gb|AY112122.1| Zea mays CL62793_1 mRNA sequence
          Length = 636

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 419 aagctgtacacgtcgctgctc 439
           |||||||||||||||||||||
Sbjct: 189 aagctgtacacgtcgctgctc 169
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>ref|NM_126955.3| Arabidopsis thaliana ATSERK4; protein binding / protein kinase/
            transmembrane receptor protein serine/threonine kinase
            AT2G13790 (ATSERK4) mRNA, complete cds
          Length = 2219

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccagtgatgagctcgagaag 409
            ||||||||||||||||||||
Sbjct: 1622 ccagtgatgagctcgagaag 1603
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>ref|NM_126956.3| Arabidopsis thaliana ATSERK5; ATP binding / protein kinase/
            transmembrane receptor protein serine/threonine kinase
            AT2G13800 (ATSERK5) mRNA, complete cds
          Length = 1985

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccagtgatgagctcgagaag 409
            ||||||||||||||||||||
Sbjct: 1426 ccagtgatgagctcgagaag 1407
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>ref|NM_197350.1| Oryza sativa (japonica cultivar-group) putative receptor protein
           kinase (OSJNBa0076F20.2), mRNA
          Length = 1706

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 gggccgcctcctcaccgccg 228
           ||||||||||||||||||||
Sbjct: 938 gggccgcctcctcaccgccg 957
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>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
              complete sequence
          Length = 136143

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 107    gctcccgagggtgatgatggcggt 130
              |||||| |||||||||||||||||
Sbjct: 118382 gctcccaagggtgatgatggcggt 118405
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>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0025P09, complete sequence
          Length = 167318

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 107  gctcccgagggtgatgatggcggt 130
            |||||| |||||||||||||||||
Sbjct: 1578 gctcccaagggtgatgatggcggt 1601
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>gb|AC147835.2| Xenopus tropicalis clone CH216-24N20, complete sequence
          Length = 164328

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    attcattttcatgcaactaaagtt 37
             ||||||||| ||||||||||||||
Sbjct: 41719 attcattttaatgcaactaaagtt 41742
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>ref|XM_673303.1| Plasmodium berghei strain ANKA hypothetical protein (PB000060.01.0)
            partial mRNA
          Length = 2838

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   cacaattcattttcatgcaa 29
            ||||||||||||||||||||
Sbjct: 2066 cacaattcattttcatgcaa 2047
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>gb|BT010276.1| Drosophila melanogaster RE08772 full insert cDNA
          Length = 3821

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcatcttgggccgcctcctc 221
           ||||||||||||||||||||
Sbjct: 495 gcatcttgggccgcctcctc 514
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>gb|AY056243.1| Arabidopsis thaliana unknown protein (At2g13780) mRNA, complete cds
          Length = 2070

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccagtgatgagctcgagaag 409
            ||||||||||||||||||||
Sbjct: 1505 ccagtgatgagctcgagaag 1486
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>gb|AC129029.7| Homo sapiens 12 BAC RP11-84D7 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 122467

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   attttcatgcaactaaagtt 37
            ||||||||||||||||||||
Sbjct: 7026 attttcatgcaactaaagtt 7007
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>gb|AC117377.9| Homo sapiens 12 BAC RP11-406H4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 107100

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   catctccttctccaggatgc 177
             ||||||||||||||||||||
Sbjct: 87200 catctccttctccaggatgc 87219
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>gb|AY094412.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, complete cds
          Length = 1965

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccagtgatgagctcgagaag 409
            ||||||||||||||||||||
Sbjct: 1410 ccagtgatgagctcgagaag 1391
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>ref|NM_138055.1| Drosophila melanogaster CG30419-RA (CG30419), mRNA
          Length = 1232

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gcatcttgggccgcctcctc 221
           ||||||||||||||||||||
Sbjct: 496 gcatcttgggccgcctcctc 515
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>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete
             sequence
          Length = 104009

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   ccagtgatgagctcgagaag 409
             ||||||||||||||||||||
Sbjct: 64815 ccagtgatgagctcgagaag 64796



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   ccagtgatgagctcgagaag 409
             ||||||||||||||||||||
Sbjct: 54331 ccagtgatgagctcgagaag 54312
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>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence,
            complete sequence
          Length = 165394

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  gggccgcctcctcaccgccg 228
            ||||||||||||||||||||
Sbjct: 8565 gggccgcctcctcaccgccg 8546
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>emb|CR388979.1| Gallus gallus finished cDNA, clone ChEST325j8
          Length = 1000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 210 ggccgcctcctcaccgccgacggg 233
           ||||||||| ||||||||||||||
Sbjct: 694 ggccgcctcgtcaccgccgacggg 717
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 209      gggccgcctcctcaccgccg 228
                ||||||||||||||||||||
Sbjct: 19380699 gggccgcctcctcaccgccg 19380680
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 107      gctcccgagggtgatgatggcggt 130
                |||||| |||||||||||||||||
Sbjct: 17741624 gctcccaagggtgatgatggcggt 17741647
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>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
             BACR04P18, complete sequence
          Length = 159455

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   gcatcttgggccgcctcctc 221
             ||||||||||||||||||||
Sbjct: 52156 gcatcttgggccgcctcctc 52137
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>emb|BX820053.1|CNS0AA0J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS69ZA06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccagtgatgagctcgagaag 409
            ||||||||||||||||||||
Sbjct: 1624 ccagtgatgagctcgagaag 1605
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>emb|BX820947.1|CNS0A8M0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH84ZA12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1916

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccagtgatgagctcgagaag 409
            ||||||||||||||||||||
Sbjct: 1428 ccagtgatgagctcgagaag 1409
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 116     ggtgatgatggcggtgccgtcgcc 139
               ||||| ||||||||||||||||||
Sbjct: 1671291 ggtgaggatggcggtgccgtcgcc 1671314
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>gb|AC112230.5| Homo sapiens BAC clone RP11-85D18 from 2, complete sequence
          Length = 196480

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    ctccttctccaggatgcggtcaag 184
              ||||||||||| ||||||||||||
Sbjct: 168719 ctccttctccacgatgcggtcaag 168742
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    cttgggccgcctcctcaccg 225
              ||||||||||||||||||||
Sbjct: 641276 cttgggccgcctcctcaccg 641295
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>ref|XM_310967.2| Anopheles gambiae str. PEST ENSANGP00000008105 (ENSANGG00000006115),
            partial mRNA
          Length = 5283

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  ccaagctgtacacgtcgctg 436
            ||||||||||||||||||||
Sbjct: 986  ccaagctgtacacgtcgctg 1005
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>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete
              sequence
          Length = 298827

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    gcatcttgggccgcctcctc 221
              ||||||||||||||||||||
Sbjct: 151557 gcatcttgggccgcctcctc 151538
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>gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, complete sequence
          Length = 173706

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gaaagattcagttgattctg 363
             ||||||||||||||||||||
Sbjct: 58793 gaaagattcagttgattctg 58774
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 209      gggccgcctcctcaccgccg 228
                ||||||||||||||||||||
Sbjct: 19391975 gggccgcctcctcaccgccg 19391956
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    cttgggccgcctcctcaccg 225
              ||||||||||||||||||||
Sbjct: 303436 cttgggccgcctcctcaccg 303455
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>emb|CT030693.7| Mouse DNA sequence from clone RP24-109B11 on chromosome 16, complete
              sequence
          Length = 166299

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     ttcattttcatgcaactaaa 34
              ||||||||||||||||||||
Sbjct: 139396 ttcattttcatgcaactaaa 139377
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>gb|BT001116.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, complete cds
          Length = 1455

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccagtgatgagctcgagaag 409
            ||||||||||||||||||||
Sbjct: 1070 ccagtgatgagctcgagaag 1051


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,069,035
Number of Sequences: 3902068
Number of extensions: 4069035
Number of successful extensions: 75048
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74651
Number of HSP's gapped (non-prelim): 387
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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