ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-... 224 2e-55
2gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRN... 208 1e-50
3gb|AY103674.1| Zea mays PCO104001 mRNA sequence 208 1e-50
4ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA 190 3e-45
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
6dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
7dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
8ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA 157 4e-35
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 157 4e-35
10gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom... 157 4e-35
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
12dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
13dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
14gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, com... 92 2e-15
15emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribos... 76 1e-10
16gb|AY105798.1| Zea mays PCO089449 mRNA sequence 76 1e-10
17gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, ... 66 1e-07
18gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clon... 64 5e-07
19ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6... 58 3e-05
20gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989)... 58 3e-05
21gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S... 58 3e-05
22gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S... 58 3e-05
23emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 58 3e-05
24emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, B... 58 3e-05
25emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
26emb|BX827692.1|CNS0A3WM Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
27gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like prote... 52 0.002
28gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6... 50 0.007
29gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence 48 0.027
30gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence 48 0.027
31ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural consti... 46 0.11
32emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, B... 46 0.11
33gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 46 0.11
34gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 46 0.11
35gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 46 0.11
36emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Co... 46 0.11
37emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Co... 46 0.11
38emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Co... 46 0.11
39emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Co... 46 0.11
40emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal pr... 46 0.11
41dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
42gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA 46 0.11
43gb|AC026316.16| Homo sapiens 3 BAC RP11-373E16 (Roswell Park Can... 44 0.43
44emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal ... 44 0.43
45emb|AL160071.16| Human DNA sequence from clone RP4-803K15 on chr... 42 1.7
46emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F... 42 1.7
47gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, compl... 42 1.7
48gb|AC138647.6| Homo sapiens chromosome 8, clone RP11-1137N14, co... 42 1.7
49emb|CR376760.1| Pan troglodytes chromosome X BAC PTB-056G20, com... 42 1.7
50emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Co... 42 1.7
51gb|AC005805.12| Homo sapiens 12 PAC RP3-473L9 (Roswell Park Canc... 42 1.7
52gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, comple... 42 1.7
53gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complet... 42 1.7
54emb|AL096807.1|CNS00YVE Homo sapiens genomic region containing h... 42 1.7
55gb|AE006806.1| Sulfolobus solfataricus P2 section 165 of 272 of ... 40 6.7
56ref|XM_452749.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C12353g ... 40 6.7
57gb|AC160864.9| Mus musculus 10 BAC RP23-425N2 (Roswell Park Canc... 40 6.7
58gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosom... 40 6.7
59gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosom... 40 6.7
60ref|XM_719987.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.7
61ref|XM_960945.1| Plasmodium falciparum 3D7 hypothetical protein ... 40 6.7
62gb|AC115970.8| Mus musculus chromosome 10, clone RP24-77I13, com... 40 6.7
63gb|AC151708.6| Medicago truncatula clone mth2-15h5, complete seq... 40 6.7
64emb|AL357314.11| Human DNA sequence from clone RP4-682C21 on chr... 40 6.7
65emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 6.7
66emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.7
67emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, ... 40 6.7
68emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, ... 40 6.7
69emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, B... 40 6.7
70gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, com... 40 6.7
71ref|NM_053794.1| Rattus norvegicus protein kinase, lysine defici... 40 6.7
72gb|AC154090.19| Medicago truncatula clone mth2-92k14, complete s... 40 6.7
73gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete se... 40 6.7
74gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, com... 40 6.7
75gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete se... 40 6.7
76gb|AC087319.14| Homo sapiens 12p BAC RP11-229F13 (Roswell Park C... 40 6.7
77emb|BX323458.7| Zebrafish DNA sequence from clone DKEYP-69B9 in ... 40 6.7
78gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, compl... 40 6.7
79gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 1... 40 6.7
80emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Co... 40 6.7
81gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, comp... 40 6.7
82gb|AF227741.1|AF227741 Rattus norvegicus protein kinase WNK1 (WN... 40 6.7
83gb|AC022333.11|AC022333 Homo sapiens chr3 BAC RP11-64O13 (Roswel... 40 6.7
84dbj|AP003503.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.7
85gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 6.7
86gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complet... 40 6.7
87gb|U04327.1|SFU04327 Simian foamy virus SFVcpz, complete genome 40 6.7
88emb|AL671671.5| Mouse DNA sequence from clone RP23-419D6 on chro... 40 6.7 
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds
          Length = 1039

 Score =  224 bits (113), Expect = 2e-55
 Identities = 170/189 (89%)
 Strand = Plus / Minus

                                                                       
Query: 306 ggcagcaggagccttggtagcagcagaaagcttcgacctcctcttggccatgctctcact 365
           |||||||| ||||||||  || ||||||||||| |||||||||||||||| |||||| ||
Sbjct: 813 ggcagcagaagccttggcggcggcagaaagcttggacctcctcttggccaagctctcgct 754

                                                                       
Query: 366 cctgcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctc 425
           || ||||||||| || ||||||| |||||| ||||| |||||||||||||| ||||||||
Sbjct: 753 ccggcggtctctctgttccttcagcctctgggcaagaagcttctggtactcagcagcctc 694

                                                                       
Query: 426 agacttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctggat 485
           ||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||| 
Sbjct: 693 agacttcttcttagttatcctcttcttcttgtcagcgattctagcacgcttcctctggag 634

                    
Query: 486 ggtcaaggg 494
           |||||||||
Sbjct: 633 ggtcaaggg 625
to top
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds
          Length = 1023

 Score =  208 bits (105), Expect = 1e-50
 Identities = 168/189 (88%)
 Strand = Plus / Minus

                                                                       
Query: 306 ggcagcaggagccttggtagcagcagaaagcttcgacctcctcttggccatgctctcact 365
           |||||||| ||||||||  || ||||||||||| |||||||||||||||| |||||||||
Sbjct: 812 ggcagcagaagccttggcggcggcagaaagcttagacctcctcttggccaagctctcact 753

                                                                       
Query: 366 cctgcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctc 425
            | |||||| || || || |||| |||||| ||||| |||||||||||||| ||||||||
Sbjct: 752 gcggcggtccctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctc 693

                                                                       
Query: 426 agacttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctggat 485
           ||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||| 
Sbjct: 692 agacttcttcttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggag 633

                    
Query: 486 ggtcaaggg 494
           |||||||||
Sbjct: 632 ggtcaaggg 624
to top
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence
          Length = 1198

 Score =  208 bits (105), Expect = 1e-50
 Identities = 168/189 (88%)
 Strand = Plus / Minus

                                                                       
Query: 306 ggcagcaggagccttggtagcagcagaaagcttcgacctcctcttggccatgctctcact 365
           |||||||| ||||||||  || ||||||||||| |||||||||||||||| |||||||||
Sbjct: 940 ggcagcagaagccttggcggcggcagaaagcttagacctcctcttggccaagctctcact 881

                                                                       
Query: 366 cctgcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctc 425
            | |||||| || || || |||| |||||| ||||| |||||||||||||| ||||||||
Sbjct: 880 gcggcggtccctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctc 821

                                                                       
Query: 426 agacttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctggat 485
           ||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||| 
Sbjct: 820 agacttcttcttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggag 761

                    
Query: 486 ggtcaaggg 494
           |||||||||
Sbjct: 760 ggtcaaggg 752
to top
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                       
Query: 309 agcaggagccttggtagcagcagaaagcttcgacctcctcttggccatgctctcactcct 368
           ||||| |||||||| ||||| ||||||||| ||||||||||| |||| |||||| |||| 
Sbjct: 832 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 773

                                                                       
Query: 369 gcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctcaga 428
           ||| || || |||||||| | |||||| ||||| |||||||||||||| |||||||| ||
Sbjct: 772 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 713

                                                                   
Query: 429 cttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctgga 484
           ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 712 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctgga 657
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                            
Query: 309      agcaggagccttggtagcagcagaaagcttcgacctcctcttggccatgctctcactcct 368
                ||||| |||||||| ||||| ||||||||| ||||||||||| |||| |||||| |||| 
Sbjct: 25671577 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 25671518

                                                                            
Query: 369      gcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctcaga 428
                ||| || || |||||||| | |||||| ||||| |||||||||||||| |||||||| ||
Sbjct: 25671517 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 25671458

                                                                        
Query: 429      cttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctgga 484
                ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 25671457 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctgga 25671402
to top
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0594D10
          Length = 143200

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                          
Query: 309    agcaggagccttggtagcagcagaaagcttcgacctcctcttggccatgctctcactcct 368
              ||||| |||||||| ||||| ||||||||| ||||||||||| |||| |||||| |||| 
Sbjct: 125550 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 125491

                                                                          
Query: 369    gcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctcaga 428
              ||| || || |||||||| | |||||| ||||| |||||||||||||| |||||||| ||
Sbjct: 125490 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 125431

                                                                      
Query: 429    cttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctgga 484
              ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 125430 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctgga 125375
to top
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full
           insert sequence
          Length = 1078

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                       
Query: 309 agcaggagccttggtagcagcagaaagcttcgacctcctcttggccatgctctcactcct 368
           ||||| |||||||| ||||| ||||||||| ||||||||||| |||| |||||| |||| 
Sbjct: 833 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 774

                                                                       
Query: 369 gcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctcaga 428
           ||| || || |||||||| | |||||| ||||| |||||||||||||| |||||||| ||
Sbjct: 773 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 714

                                                                   
Query: 429 cttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctgga 484
           ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 713 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctgga 658
to top
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 983

 Score =  157 bits (79), Expect = 4e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                       
Query: 320 tggtagcagcagaaagcttcgacctcctcttggccatgctctcactcctgcggtctcttt 379
           |||| |||||||||||||| ||||||||||| |||| ||||||||||||||| || || |
Sbjct: 771 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 712

                                                                       
Query: 380 gctccttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttag 439
           ||||||| | |||||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 711 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 652

                                                      
Query: 440 caatcctcttcttcttgtcggcgattctggcacgcttcctctg 482
           |||| || | |||||| | ||||||||| || | |||||||||
Sbjct: 651 caattctttgcttcttctgggcgattctcgccctcttcctctg 609
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  157 bits (79), Expect = 4e-35
 Identities = 142/163 (87%)
 Strand = Plus / Plus

                                                                            
Query: 320      tggtagcagcagaaagcttcgacctcctcttggccatgctctcactcctgcggtctcttt 379
                |||| |||||||||||||| ||||||||||| |||| ||||||||||||||| || || |
Sbjct: 15460637 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15460696

                                                                            
Query: 380      gctccttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttag 439
                ||||||| | |||||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 15460697 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15460756

                                                           
Query: 440      caatcctcttcttcttgtcggcgattctggcacgcttcctctg 482
                |||| || | |||||| | ||||||||| || | |||||||||
Sbjct: 15460757 caattctttgcttcttctgggcgattctcgccctcttcctctg 15460799
to top
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
             sequence
          Length = 164705

 Score =  157 bits (79), Expect = 4e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                         
Query: 320   tggtagcagcagaaagcttcgacctcctcttggccatgctctcactcctgcggtctcttt 379
             |||| |||||||||||||| ||||||||||| |||| ||||||||||||||| || || |
Sbjct: 40889 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 40830

                                                                         
Query: 380   gctccttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttag 439
             ||||||| | |||||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 40829 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 40770

                                                        
Query: 440   caatcctcttcttcttgtcggcgattctggcacgcttcctctg 482
             |||| || | |||||| | ||||||||| || | |||||||||
Sbjct: 40769 caattctttgcttcttctgggcgattctcgccctcttcctctg 40727
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  157 bits (79), Expect = 4e-35
 Identities = 142/163 (87%)
 Strand = Plus / Plus

                                                                            
Query: 320      tggtagcagcagaaagcttcgacctcctcttggccatgctctcactcctgcggtctcttt 379
                |||| |||||||||||||| ||||||||||| |||| ||||||||||||||| || || |
Sbjct: 15455171 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 15455230

                                                                            
Query: 380      gctccttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttag 439
                ||||||| | |||||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 15455231 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 15455290

                                                           
Query: 440      caatcctcttcttcttgtcggcgattctggcacgcttcctctg 482
                |||| || | |||||| | ||||||||| || | |||||||||
Sbjct: 15455291 caattctttgcttcttctgggcgattctcgccctcttcctctg 15455333
to top
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full
           insert sequence
          Length = 1018

 Score =  157 bits (79), Expect = 4e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                       
Query: 320 tggtagcagcagaaagcttcgacctcctcttggccatgctctcactcctgcggtctcttt 379
           |||| |||||||||||||| ||||||||||| |||| ||||||||||||||| || || |
Sbjct: 769 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 710

                                                                       
Query: 380 gctccttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttag 439
           ||||||| | |||||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 709 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 650

                                                      
Query: 440 caatcctcttcttcttgtcggcgattctggcacgcttcctctg 482
           |||| || | |||||| | ||||||||| || | |||||||||
Sbjct: 649 caattctttgcttcttctgggcgattctcgccctcttcctctg 607
to top
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full
           insert sequence
          Length = 990

 Score =  157 bits (79), Expect = 4e-35
 Identities = 142/163 (87%)
 Strand = Plus / Minus

                                                                       
Query: 320 tggtagcagcagaaagcttcgacctcctcttggccatgctctcactcctgcggtctcttt 379
           |||| |||||||||||||| ||||||||||| |||| ||||||||||||||| || || |
Sbjct: 768 tggtggcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctct 709

                                                                       
Query: 380 gctccttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttag 439
           ||||||| | |||||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 708 gctccttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttgg 649

                                                      
Query: 440 caatcctcttcttcttgtcggcgattctggcacgcttcctctg 482
           |||| || | |||||| | ||||||||| || | |||||||||
Sbjct: 648 caattctttgcttcttctgggcgattctcgccctcttcctctg 606
to top
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 1020

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 121/146 (82%)
 Strand = Plus / Minus

                                                                       
Query: 331 gaaagcttcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaac 390
           |||||||| || |||||||| ||||  |||||||| | ||||||||| ||||||||||||
Sbjct: 781 gaaagcttggatctcctcttagccaaactctcactgcggcggtctctctgctccttcaac 722

                                                                       
Query: 391 ctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttc 450
           ||    ||||| || |||||||||||||| |||||||| ||   ||| ||||||||||||
Sbjct: 721 ctggaggcaaggagtttctggtactctgctgcctcagattttgccttggcaatcctcttc 662

                                     
Query: 451 ttcttgtcggcgattctggcacgctt 476
           ||||| || || ||||| || |||||
Sbjct: 661 ttcttatcagcaattcttgcccgctt 636
to top
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene)
          Length = 959

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 137/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 325 gcagcagaaagcttcgacctcctcttggccatgctctcactcctgcggtctctttgctcc 384
           |||||||| ||| | |||||| |||| |||| ||||||||| |  ||||| || ||||||
Sbjct: 750 gcagcagagagcctggacctcttctttgccaagctctcactgcgtcggtccctctgctcc 691

                                                                       
Query: 385 ttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttcttcttagcaatc 444
           || | ||||   ||||| ||||||||||| |||||||| ||||| ||   ||| ||||  
Sbjct: 690 ttgagcctcgaggcaaggagcttctggtattctgcagcttcagatttggccttggcaact 631

                                                             
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaaggg 494
           ||||||||||| || || |||||||| |||||||| || | |||||||||
Sbjct: 630 ctcttcttcttctctgcaattctggctcgcttcctttgcaaggtcaaggg 581
to top
>gb|AY105798.1| Zea mays PCO089449 mRNA sequence
          Length = 777

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/88 (86%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 369 gcggtctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctcaga 428
           ||||||||| || ||||||| |||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 732 gcggtctctctgttccttcagcctctgagcaagaagcttttggtactcggcagcctcaga 673

                                       
Query: 429 cttcttcttagcaatcctcttcttcttg 456
           ||||||    || |||||||||||||||
Sbjct: 672 cttcttg---gcgatcctcttcttcttg 648
to top
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 980

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 435 cttagcaatcctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||||||||||||| |||||||| || | ||||||||| | ||||||
Sbjct: 672 cttagcaatcctcttcttcttgtcagcgattctagctctcttcctctgaagggtcaa 616
to top
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete
             sequence
          Length = 106476

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 403   agcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgtcggcg 462
             |||||||||||||| || || ||||  ||   ||||||||||||||||||||||||||| 
Sbjct: 89314 agcttctggtactcagccgcatcagcgttagccttagcaatcctcttcttcttgtcggca 89373

                                 
Query: 463   attctggcacgcttcctctg 482
             ||||| || | |||||||||
Sbjct: 89374 attctagctctcttcctctg 89393
to top
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural
           constituent of ribosome AT4G31700 (RPS6) mRNA, complete
           cds
          Length = 993

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 338 tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
           |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 723 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 664

                                                                       
Query: 398 caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
           | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 663 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 604

                                    
Query: 458 cggcgattctggcacgcttcctctg 482
           | || ||||| || | |||||||||
Sbjct: 603 cagcaattctagctctcttcctctg 579
to top
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative
           ribosomal protein S6 (At4g31700) mRNA, complete cds
          Length = 962

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 338 tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
           |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 725 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 666

                                                                       
Query: 398 caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
           | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 665 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 606

                                    
Query: 458 cggcgattctggcacgcttcctctg 482
           | || ||||| || | |||||||||
Sbjct: 605 cagcaattctagctctcttcctctg 581
to top
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700)
           mRNA, complete cds
          Length = 784

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 338 tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
           |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 712 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 653

                                                                       
Query: 398 caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
           | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 652 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 593

                                    
Query: 458 cggcgattctggcacgcttcctctg 482
           | || ||||| || | |||||||||
Sbjct: 592 cagcaattctagctctcttcctctg 568
to top
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700)
           mRNA, complete cds
          Length = 989

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 338 tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
           |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 719 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 660

                                                                       
Query: 398 caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
           | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 659 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 600

                                    
Query: 458 cggcgattctggcacgcttcctctg 482
           | || ||||| || | |||||||||
Sbjct: 599 cagcaattctagctctcttcctctg 575
to top
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Plus

                                                                          
Query: 338    tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
              |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 112291 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 112350

                                                                          
Query: 398    caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
              | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 112351 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 112410

                                       
Query: 458    cggcgattctggcacgcttcctctg 482
              | || ||||| || | |||||||||
Sbjct: 112411 cagcaattctagctctcttcctctg 112435
to top
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII
             project)
          Length = 90902

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                         
Query: 338   tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
             |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 40980 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 40921

                                                                         
Query: 398   caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
             | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 40920 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 40861

                                      
Query: 458   cggcgattctggcacgcttcctctg 482
             | || ||||| || | |||||||||
Sbjct: 40860 cagcaattctagctctcttcctctg 40836
to top
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZD05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 938

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 338 tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
           |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 708 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 649

                                                                       
Query: 398 caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
           | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 648 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 589

                                    
Query: 458 cggcgattctggcacgcttcctctg 482
           | || ||||| || | |||||||||
Sbjct: 588 cagcaattctagctctcttcctctg 564
to top
>emb|BX827692.1|CNS0A3WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZH02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 580

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 338 tcgacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtg 397
           |||||||| |||| ||||  ||||||||||| | ||| |  || ||||||||||||   |
Sbjct: 330 tcgacctcttctttgccaaactctcactcctcctgtcacgctgttccttcaacctcgagg 271

                                                                       
Query: 398 caagcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgt 457
           | || ||||||||||| || ||||| ||||| ||   |||||||||  ||||||||||||
Sbjct: 270 cgagaagcttctggtaatcagcagcatcagaattagccttagcaattttcttcttcttgt 211

                                    
Query: 458 cggcgattctggcacgcttcctctg 482
           | || ||||| || | |||||||||
Sbjct: 210 cagcaattctagctctcttcctctg 186
to top
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete
           cds
          Length = 1032

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 439 gcaatcctcttcttcttgtcggcgattctggcacgcttcctctgga 484
           ||||| ||||||||||||||||| ||||| || | |||||||||||
Sbjct: 662 gcaattctcttcttcttgtcggcaattcttgctctcttcctctgga 617
to top
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds
          Length = 945

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 358 ctctcactcctgcggtctctttgctccttcaacctctgtgcaagcagcttctggtactct 417
           ||||||||||| | ||| |  || ||||||||||||   || || ||||||||||| || 
Sbjct: 692 ctctcactcctcctgtcacgctgttccttcaacctcgaggcgagaagcttctggtaatca 633

                                                                       
Query: 418 gcagcctcagacttcttcttagcaatcctcttcttcttgtcggcgattctggcacgcttc 477
           ||||| ||||| ||   |||||||||  ||||||||||||| || ||||| || | ||||
Sbjct: 632 gcagcatcagaattagccttagcaattttcttcttcttgtcagcaattctagctctcttc 573

                
Query: 478 ctctg 482
           |||||
Sbjct: 572 ctctg 568
to top
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence
          Length = 1067

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 102/128 (79%)
 Strand = Plus / Minus

                                                                       
Query: 340 gacctcctcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtgca 399
           |||||| |||| ||||  |||||||| |  || |||||||| |||||||||||    |||
Sbjct: 773 gacctcttcttagccaaactctcactacgtcgttctctttgttccttcaacctactagca 714

                                                                       
Query: 400 agcagcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgtcg 459
           || |||||||| || || || ||||| |||||   ||| ||||| |||||||||||||| 
Sbjct: 713 agaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttgtca 654

                   
Query: 460 gcgattct 467
           || |||||
Sbjct: 653 gcaattct 646
to top
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence
          Length = 1065

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 439 gcaatcctcttcttcttgtcggcgattctggcacgcttcctctg 482
           ||||| |||||||||||||| |||||||| || | |||||||||
Sbjct: 682 gcaattctcttcttcttgtcagcgattcttgctctcttcctctg 639
to top
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome
           AT5G10360 (EMB3010) mRNA, complete cds
          Length = 1095

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 690 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
to top
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 445    ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
              |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 105982 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 105936
to top
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 750

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 605 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 559
to top
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 690 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
to top
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 690 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
to top
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 689

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 351 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 305
to top
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 969

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 673 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 627
to top
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 981

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 671 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 625
to top
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS15ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 947

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 671 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 625
to top
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6
          Length = 957

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctggatggtcaa 491
           |||||||||||||| || ||||| || | ||||||||||| ||||||
Sbjct: 605 ctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 559
to top
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full
           insert sequence
          Length = 1049

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 379 tgctccttcaacctctgtgcaagcagcttctggtactctgcagcctc 425
           |||||||||| ||||||  | |||||||| ||||||||||| |||||
Sbjct: 730 tgctccttcagcctctggacgagcagcttgtggtactctgctgcctc 684
to top
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA
          Length = 1056

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                       
Query: 373 tctctttgctccttcaacctctgtgcaagcagcttctggtactctgcagcctcagacttc 432
           |||||||| |||||||||||    ||||| |||||||| || || || ||||| ||||| 
Sbjct: 724 tctctttgttccttcaacctactagcaagaagcttctgataatcagctgcctctgactta 665

                                              
Query: 433 ttcttagcaatcctcttcttcttgtcggcgattct 467
             ||| ||||| |||||||||||||| || |||||
Sbjct: 664 gccttggcaattctcttcttcttgtcagcaattct 630
to top
>gb|AC026316.16| Homo sapiens 3 BAC RP11-373E16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164409

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 379    tgctccttcaacctctgtgcaagcag 404
              ||||||||| ||||||||||||||||
Sbjct: 130048 tgctccttctacctctgtgcaagcag 130073
to top
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial
          Length = 920

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 109/138 (78%)
 Strand = Plus / Minus

                                                                       
Query: 347 tcttggccatgctctcactcctgcggtctctttgctccttcaacctctgtgcaagcagct 406
           |||| |||| ||||||||| | ||| || || ||||||||||| ||   |||||| || |
Sbjct: 593 tctttgccaagctctcacttcggcgttccctctgctccttcaatctggatgcaaggagtt 534

                                                                       
Query: 407 tctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgtcggcgattc 466
           | || |||||||| ||||| || ||   ||| ||||| ||||||||||| || || ||||
Sbjct: 533 tttgatactctgctgcctctgattttgccttggcaattctcttcttcttatctgcaattc 474

                             
Query: 467 tggcacgcttcctctgga 484
           | || |||||||| ||||
Sbjct: 473 ttgctcgcttcctttgga 456
to top
>emb|AL160071.16| Human DNA sequence from clone RP4-803K15 on chromosome 20 Contains the
             3' end of the C20orf179 gene for chromosome 20 open
             reading frame 179, complete sequence
          Length = 51556

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   cagaggcagcaggagccttgg 322
             |||||||||||||||||||||
Sbjct: 43227 cagaggcagcaggagccttgg 43207
to top
>emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F12 on chromosome 6p22.3-24 Contains
              the 5' end of a novel gene, complete sequence
          Length = 123489

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 99     aaagtactaggatatttcaaatgga 123
              |||||||| ||||||||||||||||
Sbjct: 111690 aaagtacttggatatttcaaatgga 111714
to top
>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence
          Length = 134319

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    acagataaattaggaaaaaat 90
             |||||||||||||||||||||
Sbjct: 37126 acagataaattaggaaaaaat 37106
to top
>gb|AC138647.6| Homo sapiens chromosome 8, clone RP11-1137N14, complete sequence
          Length = 85600

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 74    ataaattaggaaaaaatcagcaaat 98
             |||||||||||||||| ||||||||
Sbjct: 45913 ataaattaggaaaaaaccagcaaat 45937
to top
>emb|CR376760.1| Pan troglodytes chromosome X BAC PTB-056G20, complete sequence
          Length = 142982

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 414   ctctgcagcctcagacttctt 434
             |||||||||||||||||||||
Sbjct: 66688 ctctgcagcctcagacttctt 66708
to top
>emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH2ZH10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 692

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                       
Query: 404 gcttctggtactctgcagcctcagacttcttcttagcaatcctcttcttcttgtcggcga 463
           |||||||||| || || || ||||| |||  ||| || || |||||||||||||| || |
Sbjct: 394 gcttctggtaatcagctgcatcagagttcgccttggcgattctcttcttcttgtcagcaa 335

                                
Query: 464 ttctggcacgcttcctctgga 484
           |||| || | |||||||||||
Sbjct: 334 ttctagctctcttcctctgga 314
to top
>gb|AC005805.12| Homo sapiens 12 PAC RP3-473L9 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 113064

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 417   tgcagcctcagacttcttcttagca 441
             |||||||||||||| ||||||||||
Sbjct: 16133 tgcagcctcagactccttcttagca 16157
to top
>gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, complete sequence
          Length = 165033

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 297  ttaagcagaggcagcaggagc 317
            |||||||||||||||||||||
Sbjct: 1327 ttaagcagaggcagcaggagc 1347
to top
>gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complete sequence
          Length = 179316

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 297   ttaagcagaggcagcaggagc 317
             |||||||||||||||||||||
Sbjct: 24715 ttaagcagaggcagcaggagc 24695
to top
>emb|AL096807.1|CNS00YVE Homo sapiens genomic region containing hypervariable minisatellites
            chromosome 8[8q24.3] of Homo sapiens
          Length = 34105

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   ataaattaggaaaaaatcagcaaat 98
            |||||||||||||||| ||||||||
Sbjct: 6599 ataaattaggaaaaaaccagcaaat 6575
to top
>gb|AE006806.1| Sulfolobus solfataricus P2 section 165 of 272 of the complete genome
          Length = 10634

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  cagcctcagacttcttctta 438
            ||||||||||||||||||||
Sbjct: 4437 cagcctcagacttcttctta 4418
to top
>ref|XM_452749.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C12353g predicted mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   actcagaatataaacaatat 68
            ||||||||||||||||||||
Sbjct: 2578 actcagaatataaacaatat 2597
to top
>gb|AC160864.9| Mus musculus 10 BAC RP23-425N2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190336

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tacttgagtagaaactaaca 171
             ||||||||||||||||||||
Sbjct: 38563 tacttgagtagaaactaaca 38544
to top
>gb|AC121898.3| Mus musculus BAC clone RP24-161A24 from chromosome 15, complete sequence
          Length = 193321

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ggaaaaaatcagcaaataaa 101
              ||||||||||||||||||||
Sbjct: 147982 ggaaaaaatcagcaaataaa 147963
to top
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   cctcttggccatgctctcac 364
             ||||||||||||||||||||
Sbjct: 82373 cctcttggccatgctctcac 82354
to top
>ref|XM_719987.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04743)
            partial mRNA
          Length = 2571

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tataaacaatataacagata 76
            ||||||||||||||||||||
Sbjct: 1422 tataaacaatataacagata 1403
to top
>ref|XM_960945.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0235c) partial
           mRNA
          Length = 4305

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 55  aatataaacaatataacagataaa 78
           |||||||||||||||| |||||||
Sbjct: 523 aatataaacaatataatagataaa 546
to top
>gb|AC115970.8| Mus musculus chromosome 10, clone RP24-77I13, complete sequence
          Length = 170563

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tacttgagtagaaactaaca 171
              ||||||||||||||||||||
Sbjct: 135072 tacttgagtagaaactaaca 135053
to top
>gb|AC151708.6| Medicago truncatula clone mth2-15h5, complete sequence
          Length = 86100

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tgagataagacttggttgct 143
             ||||||||||||||||||||
Sbjct: 15201 tgagataagacttggttgct 15182
to top
>emb|AL357314.11| Human DNA sequence from clone RP4-682C21 on chromosome 1p31.1-31.3
             Contains the ACADM gene for acyl-Coenzyme A dehydrogenase,
             C-4 to C-12 straight chain, a dihydrolipoamide
             S-succinyltransferase (E2 component of 2-oxo-glutarate
             complex) (DLTS) pseudogene, the RABGGTB gene for Rab
             geranylgeranyltransferase, beta subunit and the 5' end of
             the MSH4 gene for mutS homolog 4 (E. coli), complete
             sequence
          Length = 111566

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    taggaaaaaatcagcaaata 99
             ||||||||||||||||||||
Sbjct: 28994 taggaaaaaatcagcaaata 29013
to top
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     aatataaacaatataacagataaa 78
              |||||||||||||||| |||||||
Sbjct: 210634 aatataaacaatataatagataaa 210611
to top
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      actcagaatataaacaatat 68
               ||||||||||||||||||||
Sbjct: 1053889 actcagaatataaacaatat 1053908
to top
>emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 33
          Length = 190026

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 164  aactaacataaaattccagtaaaa 187
            |||||||| |||||||||||||||
Sbjct: 1206 aactaacagaaaattccagtaaaa 1229
to top
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32
          Length = 198788

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 164    aactaacataaaattccagtaaaa 187
              |||||||| |||||||||||||||
Sbjct: 194994 aactaacagaaaattccagtaaaa 195017
to top
>emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, BAC clone T26M18 (ESSA project)
          Length = 90824

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 164   aactaacataaaattccagtaaaa 187
             |||||||| |||||||||||||||
Sbjct: 57694 aactaacagaaaattccagtaaaa 57717
to top
>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence
          Length = 169125

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   cttaagcagaggcagcagga 315
             ||||||||||||||||||||
Sbjct: 61527 cttaagcagaggcagcagga 61546
to top
>ref|NM_053794.1| Rattus norvegicus protein kinase, lysine deficient 1 (Prkwnk1), mRNA
          Length = 7342

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  gctctacttgagtagaaact 167
            ||||||||||||||||||||
Sbjct: 2053 gctctacttgagtagaaact 2034
to top
>gb|AC154090.19| Medicago truncatula clone mth2-92k14, complete sequence
          Length = 117932

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tgagataagacttggttgct 143
             ||||||||||||||||||||
Sbjct: 69015 tgagataagacttggttgct 68996
to top
>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence
          Length = 122876

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  tgagataagacttggttgct 143
            ||||||||||||||||||||
Sbjct: 3881 tgagataagacttggttgct 3862
to top
>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence
          Length = 186812

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    cttaagcagaggcagcagga 315
              ||||||||||||||||||||
Sbjct: 100314 cttaagcagaggcagcagga 100295
to top
>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence
          Length = 133030

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    tgagataagacttggttgct 143
              ||||||||||||||||||||
Sbjct: 117825 tgagataagacttggttgct 117844
to top
>gb|AC087319.14| Homo sapiens 12p BAC RP11-229F13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 158004

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 259   tgatagttttgtccaactaatgaaagac 286
             ||||| |||||||||| |||||||||||
Sbjct: 19105 tgataattttgtccaaataatgaaagac 19078
to top
>emb|BX323458.7| Zebrafish DNA sequence from clone DKEYP-69B9 in linkage group 16,
              complete sequence
          Length = 194378

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 84     aaaaaatcagcaaataaagtacta 107
              |||||||||||||||||| |||||
Sbjct: 194024 aaaaaatcagcaaataaaatacta 194001
to top
>gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, complete sequence
          Length = 143200

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    aagcagaggcagcaggagcc 318
              ||||||||||||||||||||
Sbjct: 127895 aagcagaggcagcaggagcc 127914
to top
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence
          Length = 157200

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  cttaagcagaggcagcagga 315
            ||||||||||||||||||||
Sbjct: 3125 cttaagcagaggcagcagga 3144
to top
>emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH75ZG03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 645

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 445 ctcttcttcttgtcggcgattctggcacgcttcctctgga 484
           |||||||||||||| || ||||| || | |||||||||||
Sbjct: 341 ctcttcttcttgtcagcaattctagctctcttcctctgga 302
to top
>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence
          Length = 175075

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    aagcagaggcagcaggagcc 318
              ||||||||||||||||||||
Sbjct: 144145 aagcagaggcagcaggagcc 144126
to top
>gb|AF227741.1|AF227741 Rattus norvegicus protein kinase WNK1 (WNK1) mRNA, complete cds
          Length = 7342

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  gctctacttgagtagaaact 167
            ||||||||||||||||||||
Sbjct: 2053 gctctacttgagtagaaact 2034
to top
>gb|AC022333.11|AC022333 Homo sapiens chr3 BAC RP11-64O13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 173907

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    agccttggtagcagcagaaa 334
              ||||||||||||||||||||
Sbjct: 120718 agccttggtagcagcagaaa 120699
to top
>dbj|AP003503.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-86D13, complete
              sequence
          Length = 175454

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    agccttggtagcagcagaaa 334
              ||||||||||||||||||||
Sbjct: 126906 agccttggtagcagcagaaa 126925
to top
>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 55      aatataaacaatataacagataaattag 82
               |||||||||||||||| |||||||||||
Sbjct: 2554415 aatataaacaatataa-agataaattag 2554441
to top
>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence
          Length = 165737

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   cctcttggccatgctctcac 364
             ||||||||||||||||||||
Sbjct: 14193 cctcttggccatgctctcac 14212
to top
>gb|U04327.1|SFU04327 Simian foamy virus SFVcpz, complete genome
          Length = 13246

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 250  gaaactggttgatagttttgtcca 273
            |||||| |||||||||||||||||
Sbjct: 3148 gaaactagttgatagttttgtcca 3125
to top
>emb|AL671671.5| Mouse DNA sequence from clone RP23-419D6 on chromosome 4, complete
             sequence
          Length = 102298

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ttcatgcaaaatatgaccac 231
             ||||||||||||||||||||
Sbjct: 45121 ttcatgcaaaatatgaccac 45102


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,408,711
Number of Sequences: 3902068
Number of extensions: 5408711
Number of successful extensions: 118662
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 118401
Number of HSP's gapped (non-prelim): 259
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top