>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/67 (28%), Positives = 23/67 (34%)
 Frame = -1

Query: 469 RQGRQDLXXXXXXXXXXXXRYPQEASRQEAAHQAVGAGEEGHARQEGPRQEGQEVESPSS 290
           R+GR                 P E +   A     G G  G AR  GPRQ+ +    P  
Sbjct: 445 RKGRMGRQLETTATSASATGGPAEEAGASAPEGQAGGGPRGRAR--GPRQQARRRHGPQR 502

Query: 289 RNEFPLA 269
           R   P A
Sbjct: 503 RRGPPQA 509

>NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilament light|
           polypeptide) (NF-L)
          Length = 555

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 403 QEASRQEAAHQAVGAGEEGHARQEGPRQEGQE 308
           +EA  +EA  +  GA EE    +EG  +EG+E
Sbjct: 486 EEAGGEEAEEEEEGAKEESEEGKEGEEEEGEE 517

>EF2_NATPD (Q3IUM4) Elongation factor 2 (EF-2)|
          Length = 729

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -1

Query: 367 VGAGEEGHARQEGPRQEGQEVE--SPSSRNEFPLAVFP 260
           V  GE     +E P+QE +EVE  SP++ N F + V P
Sbjct: 458 VNTGEPIVVFREAPQQESREVEGRSPNNHNRFYITVEP 495

>ICAL_RABIT (P08855) Calpastatin (Calpain inhibitor) [Contains: Erythrocyte|
           calpastatin]
          Length = 718

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 406 PQEASRQEAAHQAVGAGEEGHARQEGPRQEGQEVESPSSRNE 281
           P+E ++ ++ H+    GE  H R E      +E  +P+ R E
Sbjct: 56  PKEHTKPKSTHKHASDGEGKHGRNEKTASRSKEPVTPAKRTE 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,609,508
Number of Sequences: 219361
Number of extensions: 779203
Number of successful extensions: 2115
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)