>gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full insert mRNA
           sequence
          Length = 1157

 Score =  367 bits (185), Expect = 2e-98
 Identities = 215/225 (95%)
 Strand = Plus / Minus

                                                                       
Query: 236 ggctcactgccgcattcaggaagatttcttgctctcctgcaggcgctcgaacaggctgcc 295
           ||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||
Sbjct: 887 ggctcactgccacattcaggtagatttcttgctttcctgcagacgctcgaacaggctgcc 828

                                                                       
Query: 296 atcgaaggcgcccctcacgatttctcgctgcaaaaggccttctttatcctttgccacctt 355
           |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 827 atcgaaggcgccccgcacgatttctcgctgcaaaaagccttcgttatcctttgccacctt 768

                                                                       
Query: 356 gtgcagcaacttccattcgaggttggctgcggcccagcccaggaaatcatacatattacg 415
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 767 gtgcagcaacttccattcgaggttggccgcggcccagcccaggaaatcatacatattgcg 708

                                                        
Query: 416 gttgtgtttaagcatggcgttaatctcatcttctgacaaagcatt 460
           ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gttgtatttaagcatggcgttaatctcatcttctgacaaagcatt 663



 Score =  168 bits (85), Expect = 1e-38
 Identities = 189/220 (85%), Gaps = 9/220 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcgaggtactgatgattcaagaggggacattaccaagtacc-ctgtacaccttctatgtg 59
            |||||||| |||||||||| ||| | ||||||| |||| || ||||||||||||| || |
Sbjct: 1104 gcgaggtaatgatgattcacgagtgcacattac-aagttccactgtacaccttctgtgcg 1046

                                                                        
Query: 60   ctaccaataacagtacaaattccagttccaaatatgaagacagatgaaaatgtttaggcc 119
            |||||||||| | ||||||||||||||| |||||  ||  || |||||||||||||||||
Sbjct: 1045 ctaccaataaaaatacaaattccagttcaaaataacaatgcaaatgaaaatgtttaggcc 986

                                                                        
Query: 120  gccgtagacgggccgagcacttcttattcgacgtacacacaactcaaacta-----cagg 174
            |||| ||||||||| | ||||||||||| |||||  |||||||||||||||     ||||
Sbjct: 985  gccgcagacgggccaaacacttcttatttgacgt--acacaactcaaactacaatgcagg 928

                                                    
Query: 175  gaggcttttcaaatttcaagtgcagatgtttcatagacga 214
            ||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 927  gaggcttttcaaatttcaagtgcagatattttagagacga 888

>ref|NM_187692.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 816

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                       
Query: 257 agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 316
           |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 810 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 751

                                               
Query: 317 ttctcgctgcaaaaggccttctttatcctttgccac 352
           |||||| ||||| || |||||||||||||| |||||
Sbjct: 750 ttctcgttgcaacagcccttctttatccttggccac 715



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 389 ccagcccaggaaatcatacatattacggttgtgtttaagcatggcgttaatctcatcttc 448
           |||||| | ||||||||||||||| |||||   ||||| ||| | ||| | |||||||| 
Sbjct: 678 ccagccaatgaaatcatacatattgcggtttgctttaatcatcgagttcagctcatcttt 619

                       
Query: 449 tgacaaagcatt 460
           || |||||||||
Sbjct: 618 tgtcaaagcatt 607

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 257     agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 316
               |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 6388675 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 6388616

                                                   
Query: 317     ttctcgctgcaaaaggccttctttatcctttgccac 352
               |||||| ||||| || |||||||||||||| |||||
Sbjct: 6388615 ttctcgttgcaacagcccttctttatccttggccac 6388580



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                           
Query: 389     ccagcccaggaaatcatacatattacggttgtgtttaagcatggcgttaatctcatcttc 448
               |||||| | ||||||||||||||| |||||   ||||| ||| | ||| | |||||||| 
Sbjct: 6388449 ccagccaatgaaatcatacatattgcggtttgctttaatcatcgagttcagctcatcttt 6388390

                           
Query: 449     tgacaaagcatt 460
               || |||||||||
Sbjct: 6388389 tgtcaaagcatt 6388378

>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                         
Query: 257   agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 316
             |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 68801 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 68742

                                                 
Query: 317   ttctcgctgcaaaaggccttctttatcctttgccac 352
             |||||| ||||| || |||||||||||||| |||||
Sbjct: 68741 ttctcgttgcaacagcccttctttatccttggccac 68706



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 389   ccagcccaggaaatcatacatattacggttgtgtttaagcatggcgttaatctcatcttc 448
             |||||| | ||||||||||||||| |||||   ||||| ||| | ||| | |||||||| 
Sbjct: 68575 ccagccaatgaaatcatacatattgcggtttgctttaatcatcgagttcagctcatcttt 68516

                         
Query: 449   tgacaaagcatt 460
             || |||||||||
Sbjct: 68515 tgtcaaagcatt 68504

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 257     agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 316
               |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 6387888 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 6387829

                                                   
Query: 317     ttctcgctgcaaaaggccttctttatcctttgccac 352
               |||||| ||||| || |||||||||||||| |||||
Sbjct: 6387828 ttctcgttgcaacagcccttctttatccttggccac 6387793



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                           
Query: 389     ccagcccaggaaatcatacatattacggttgtgtttaagcatggcgttaatctcatcttc 448
               |||||| | ||||||||||||||| |||||   ||||| ||| | ||| | |||||||| 
Sbjct: 6387662 ccagccaatgaaatcatacatattgcggtttgctttaatcatcgagttcagctcatcttt 6387603

                           
Query: 449     tgacaaagcatt 460
               || |||||||||
Sbjct: 6387602 tgtcaaagcatt 6387591

>gb|AY104352.1| Zea mays PCO064372 mRNA sequence
          Length = 912

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 315 atttctcgctgcaaaaggccttctttatcctttgccac 352
           |||||||||||||| ||||| ||||| |||||||||||
Sbjct: 889 atttctcgctgcaacaggccatctttgtcctttgccac 852

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 219     cggtctcgactgcgcgcggct 239
               |||||||||||||||||||||
Sbjct: 1408707 cggtctcgactgcgcgcggct 1408727

>gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132745

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    aataacagtacaaattccagt 85
             |||||||||||||||||||||
Sbjct: 39392 aataacagtacaaattccagt 39372

>gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 139793

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    aaatatgaagacagatgaaaa 109
             |||||||||||||||||||||
Sbjct: 89770 aaatatgaagacagatgaaaa 89750

>gb|AE004593.1| Pseudomonas aeruginosa PAO1, section 154 of 529 of the complete genome
          Length = 11002

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 275   caggcgctcgaacaggctgcc 295
             |||||||||||||||||||||
Sbjct: 10325 caggcgctcgaacaggctgcc 10305

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     cctgcaggcgctcgaacagg 290
               ||||||||||||||||||||
Sbjct: 2927541 cctgcaggcgctcgaacagg 2927522

>gb|AC111128.24| Mus musculus chromosome 18, clone RP23-338I7, complete sequence
          Length = 209784

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    agaggggacattaccaagta 39
             ||||||||||||||||||||
Sbjct: 41499 agaggggacattaccaagta 41480

>ref|XM_855376.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 7
           (LOC490971), mRNA
          Length = 2595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 gttaatctcatcttctgaca 453
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855343.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 6
           (LOC490971), mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 gttaatctcatcttctgaca 453
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855308.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 5
           (LOC490971), mRNA
          Length = 2604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 gttaatctcatcttctgaca 453
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_844885.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 2
           (LOC490971), mRNA
          Length = 2579

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 gttaatctcatcttctgaca 453
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855210.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 3
           (LOC490971), mRNA
          Length = 1186

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 gttaatctcatcttctgaca 453
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_548094.2| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 1
           (LOC490971), mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 gttaatctcatcttctgaca 453
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, complete sequence
          Length = 158243

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   agaggggacattaccaagta 39
            ||||||||||||||||||||
Sbjct: 8964 agaggggacattaccaagta 8983

>ref|XM_651817.1| Entamoeba histolytica HM-1:IMSS polysaccharide deacetylase,
           putative (6.t00029) partial mRNA
          Length = 828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 aggaaatcatacatattacg 415
           ||||||||||||||||||||
Sbjct: 324 aggaaatcatacatattacg 343

>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence
          Length = 144639

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gacagatgaaaatgtttagg 117
              ||||||||||||||||||||
Sbjct: 104112 gacagatgaaaatgtttagg 104131

>emb|AL512844.5| Human DNA sequence from clone RP11-90H3 on chromosome 1 Contains two
             matrin 3 (MATR3) pseudogenes, complete sequence
          Length = 159017

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   ggcccagcccaggaaatcat 405
             ||||||||||||||||||||
Sbjct: 21244 ggcccagcccaggaaatcat 21225

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     cctgcaggcgctcgaacagg 290
               ||||||||||||||||||||
Sbjct: 1106069 cctgcaggcgctcgaacagg 1106050

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 264     ttgctctcctgcaggcgctc 283
               ||||||||||||||||||||
Sbjct: 3043211 ttgctctcctgcaggcgctc 3043230

>gb|AC008360.3|AC008360 Drosophila melanogaster, chromosome 3R, region 87E-87F, BAC clone
             BACR06H18, complete sequence
          Length = 194672

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    agacagatgaaaatgtttag 116
             ||||||||||||||||||||
Sbjct: 95653 agacagatgaaaatgtttag 95634

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    cctgcaggcgctcgaacagg 290
              ||||||||||||||||||||
Sbjct: 700710 cctgcaggcgctcgaacagg 700691

>gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-190J1, complete sequence
          Length = 203842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ctatgtgctaccaataacag 72
             ||||||||||||||||||||
Sbjct: 28409 ctatgtgctaccaataacag 28390

>gb|AF274572.4| Homo sapiens chromosome X clone RP4-741O10 map q28, complete sequence
          Length = 126522

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   ggcccagcccaggaaatcat 405
             ||||||||||||||||||||
Sbjct: 42234 ggcccagcccaggaaatcat 42253

>emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 in linkage group 19,
              complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     aagacagatgaaaatgttta 115
              ||||||||||||||||||||
Sbjct: 165213 aagacagatgaaaatgttta 165194

>gb|AE003700.3| Drosophila melanogaster chromosome 3R, section 38 of 118 of the
             complete sequence
          Length = 228324

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    agacagatgaaaatgtttag 116
             ||||||||||||||||||||
Sbjct: 22154 agacagatgaaaatgtttag 22135

>emb|CT009557.4| Pan troglodytes chromosome X clone PTB-010G23 map Xq28, complete sequence
          Length = 244504

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    ggcccagcccaggaaatcat 405
              ||||||||||||||||||||
Sbjct: 168335 ggcccagcccaggaaatcat 168316

>gb|AC003923.1|AC003923 Drosophila melanogaster (P1 DS04219 (D36)) DNA sequence, complete
             sequence
          Length = 82393

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    agacagatgaaaatgtttag 116
             ||||||||||||||||||||
Sbjct: 52874 agacagatgaaaatgtttag 52893

>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete
              sequence
          Length = 226967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     aaatatgaagacagatgaaa 108
              ||||||||||||||||||||
Sbjct: 211326 aaatatgaagacagatgaaa 211345


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,300,187
Number of Sequences: 3902068
Number of extensions: 4300187
Number of successful extensions: 79311
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79122
Number of HSP's gapped (non-prelim): 187
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)