Clone Name | rbart36c07 |
---|---|
Clone Library Name | barley_pub |
>TO222_ARATH (Q9FNC9) Mitochondrial import receptor subunit TOM22 homolog 2| (Translocase of outer membrane 22 kDa subunit homolog 2) (Mitochondrial import receptor subunit TOM9-2) (Translocase of outer membrane 9 kDa subunit TOM9-2) Length = 98 Score = 83.6 bits (205), Expect = 3e-16 Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 8/85 (9%) Frame = -1 Query: 428 GDAGG----VLAAISRSSXXX----XXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLI 273 G +GG +LA IS S KLLRSTGKAAWIAGTTFL+LVVPLI Sbjct: 8 GKSGGGDPNILARISNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLILVVPLI 67 Query: 272 IEMDREQQMVDLDLQQQALLGSPPT 198 IEMDRE Q+ +++LQQ +LLG+PP+ Sbjct: 68 IEMDREAQINEIELQQASLLGAPPS 92
>TO221_ARATH (O64497) Mitochondrial import receptor subunit TOM22 homolog 1| (Translocase of outer membrane 22 kDa subunit homolog 1) (Mitochondrial import receptor subunit TOM9-1) (Translocase of outer membrane 9 kDa subunit TOM9-1) Length = 94 Score = 72.8 bits (177), Expect = 5e-13 Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Frame = -1 Query: 458 MASSSAVSKRGDAGGVLAAISR----SSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLV 291 MA + +GD+ +LA IS S KLL+STGKAAWIAGTTFL+ Sbjct: 1 MAPKKIGAGKGDSS-ILAKISNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLI 59 Query: 290 LVVPLIIEMDREQQMVDLDLQQQALLGSPP 201 L VPLI+E++++ ++ ++D +Q +LLG+PP Sbjct: 60 LAVPLILELEQDHRLGEIDFEQASLLGTPP 89
>TOM22_MOUSE (Q9CPQ3) Mitochondrial import receptor subunit TOM22 homolog| (Translocase of outer membrane 22 kDa subunit homolog) Length = 141 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = -1 Query: 395 RSSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQMVDLDLQQQAL 216 RS+ K+ R + A WI T+F++LV+P++ E ++ Q LQQ+ + Sbjct: 59 RSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQI 118 Query: 215 LGSPPT 198 L P T Sbjct: 119 LLGPNT 124
>TOM22_MACFA (Q4R3C7) Mitochondrial import receptor subunit TOM22 homolog| (Translocase of outer membrane 22 kDa subunit homolog) Length = 141 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = -1 Query: 395 RSSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQMVDLDLQQQAL 216 RS+ K+ R + A WI T+F++LV+P++ E ++ Q LQQ+ + Sbjct: 59 RSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQI 118 Query: 215 LGSPPT 198 L P T Sbjct: 119 LLGPNT 124
>TOM22_HUMAN (Q9NS69) Mitochondrial import receptor subunit TOM22 homolog| (Translocase of outer membrane 22 kDa subunit homolog) (hTom22) (1C9-2) Length = 141 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = -1 Query: 395 RSSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQMVDLDLQQQAL 216 RS+ K+ R + A WI T+F++LV+P++ E ++ Q LQQ+ + Sbjct: 59 RSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQI 118 Query: 215 LGSPPT 198 L P T Sbjct: 119 LLGPNT 124
>TOM22_SCHPO (O13813) Mitochondrial import receptor subunit tom22 (Mitochondrial| 22 kDa outer membrane protein) (Translocase of outer membrane 22 kDa subunit) Length = 144 Score = 37.7 bits (86), Expect = 0.019 Identities = 20/99 (20%), Positives = 43/99 (43%) Frame = -1 Query: 488 SSPDQNKGEGMASSSAVSKRGDAGGVLAAISRSSXXXXXXXXXXXXGKLLRSTGKAAWIA 309 S D++ EG+ + + + ++ R KL + GK+ W+ Sbjct: 36 SDSDESDFEGLEEETIIDRIAALKEIVPVTWRVKIADGAKTATTGLSKLAQFGGKSMWVI 95 Query: 308 GTTFLVLVVPLIIEMDREQQMVDLDLQQQALLGSPPTLA 192 T+ L+L VP ++ ++ E Q+ + + Q + G+ +A Sbjct: 96 STSALLLGVPFMMSLEEEAQLTEYEKQIKDQRGANEVIA 134
>TOM22_YEAST (P49334) Mitochondrial import receptor subunit TOM22 (Mitochondrial| 22 kDa outer membrane protein) (Translocase of outer membrane 22 kDa subunit) (Protein MAS17) (Mitochondrial 17 kDa assembly protein) Length = 151 Score = 31.6 bits (70), Expect = 1.3 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%) Frame = -1 Query: 332 TGKAAWIAGTTFLVLVVPLIIEMDREQQMVDL----DLQQQA 219 +G AW TT L+L VPL + + EQQ++++ DLQ A Sbjct: 94 SGNLAWTLTTTALLLGVPLSLSILAEQQLIEMEKTFDLQSDA 135
>GSPD2_DICD3 (Q01565) General secretion pathway protein D precursor (Pectic| enzymes secretion protein outD) Length = 710 Score = 30.4 bits (67), Expect = 3.0 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Frame = -1 Query: 506 SNQSLPSSPDQNKGEGMASSSAVSKRGDAGGVLAAISRSSX---XXXXXXXXXXXGKLLR 336 SN S PSSP G S+S+ G + G ++ S SS G+ + Sbjct: 300 SNASRPSSP--RSGSSSNSNSSSGSSGSSSGSSSSSSSSSSMGFGSAFGSTSSSGGRTIT 357 Query: 335 STGKAAWIAG---TTFLVLVVPLIIEMDREQQMVDLDLQQQALL 213 GK + T L++ P I D EQ + LD+++ +L Sbjct: 358 IQGKEVTVRAHDQTNSLIITAPPDIMRDLEQVINQLDIRRPQVL 401
>DPP3_RAT (O55096) Dipeptidyl-peptidase 3 (EC 3.4.14.4) (Dipeptidyl-peptidase| III) (DPP III) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III) Length = 738 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +1 Query: 1 QDKLVILR*LYRAGEGAVTVTTT 69 Q + VILR L AGEG VTVT T Sbjct: 570 QARFVILRVLLEAGEGLVTVTPT 592
>DPP3_MOUSE (Q99KK7) Dipeptidyl-peptidase 3 (EC 3.4.14.4) (Dipeptidyl-peptidase| III) (DPP III) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III) Length = 738 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +1 Query: 1 QDKLVILR*LYRAGEGAVTVTTT 69 Q + VILR L AGEG VTVT T Sbjct: 570 QARFVILRVLLEAGEGLVTVTPT 592 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,225,083 Number of Sequences: 219361 Number of extensions: 834206 Number of successful extensions: 2959 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2925 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2959 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)