ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TO222_ARATH (Q9FNC9) Mitochondrial import receptor subunit TOM22... 84 3e-16
2TO221_ARATH (O64497) Mitochondrial import receptor subunit TOM22... 73 5e-13
3TOM22_MOUSE (Q9CPQ3) Mitochondrial import receptor subunit TOM22... 40 0.004
4TOM22_MACFA (Q4R3C7) Mitochondrial import receptor subunit TOM22... 40 0.004
5TOM22_HUMAN (Q9NS69) Mitochondrial import receptor subunit TOM22... 40 0.004
6TOM22_SCHPO (O13813) Mitochondrial import receptor subunit tom22... 38 0.019
7TOM22_YEAST (P49334) Mitochondrial import receptor subunit TOM22... 32 1.3
8GSPD2_DICD3 (Q01565) General secretion pathway protein D precurs... 30 3.0
9DPP3_RAT (O55096) Dipeptidyl-peptidase 3 (EC 3.4.14.4) (Dipeptid... 29 8.7
10DPP3_MOUSE (Q99KK7) Dipeptidyl-peptidase 3 (EC 3.4.14.4) (Dipept... 29 8.7

>TO222_ARATH (Q9FNC9) Mitochondrial import receptor subunit TOM22 homolog 2|
           (Translocase of outer membrane 22 kDa subunit homolog 2)
           (Mitochondrial import receptor subunit TOM9-2)
           (Translocase of outer membrane 9 kDa subunit TOM9-2)
          Length = 98

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
 Frame = -1

Query: 428 GDAGG----VLAAISRSSXXX----XXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLI 273
           G +GG    +LA IS S                  KLLRSTGKAAWIAGTTFL+LVVPLI
Sbjct: 8   GKSGGGDPNILARISNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLILVVPLI 67

Query: 272 IEMDREQQMVDLDLQQQALLGSPPT 198
           IEMDRE Q+ +++LQQ +LLG+PP+
Sbjct: 68  IEMDREAQINEIELQQASLLGAPPS 92



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>TO221_ARATH (O64497) Mitochondrial import receptor subunit TOM22 homolog 1|
           (Translocase of outer membrane 22 kDa subunit homolog 1)
           (Mitochondrial import receptor subunit TOM9-1)
           (Translocase of outer membrane 9 kDa subunit TOM9-1)
          Length = 94

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
 Frame = -1

Query: 458 MASSSAVSKRGDAGGVLAAISR----SSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLV 291
           MA     + +GD+  +LA IS     S              KLL+STGKAAWIAGTTFL+
Sbjct: 1   MAPKKIGAGKGDSS-ILAKISNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLI 59

Query: 290 LVVPLIIEMDREQQMVDLDLQQQALLGSPP 201
           L VPLI+E++++ ++ ++D +Q +LLG+PP
Sbjct: 60  LAVPLILELEQDHRLGEIDFEQASLLGTPP 89



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>TOM22_MOUSE (Q9CPQ3) Mitochondrial import receptor subunit TOM22 homolog|
           (Translocase of outer membrane 22 kDa subunit homolog)
          Length = 141

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -1

Query: 395 RSSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQMVDLDLQQQAL 216
           RS+             K+ R +  A WI  T+F++LV+P++ E ++ Q      LQQ+ +
Sbjct: 59  RSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQI 118

Query: 215 LGSPPT 198
           L  P T
Sbjct: 119 LLGPNT 124



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>TOM22_MACFA (Q4R3C7) Mitochondrial import receptor subunit TOM22 homolog|
           (Translocase of outer membrane 22 kDa subunit homolog)
          Length = 141

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -1

Query: 395 RSSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQMVDLDLQQQAL 216
           RS+             K+ R +  A WI  T+F++LV+P++ E ++ Q      LQQ+ +
Sbjct: 59  RSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQI 118

Query: 215 LGSPPT 198
           L  P T
Sbjct: 119 LLGPNT 124



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>TOM22_HUMAN (Q9NS69) Mitochondrial import receptor subunit TOM22 homolog|
           (Translocase of outer membrane 22 kDa subunit homolog)
           (hTom22) (1C9-2)
          Length = 141

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -1

Query: 395 RSSXXXXXXXXXXXXGKLLRSTGKAAWIAGTTFLVLVVPLIIEMDREQQMVDLDLQQQAL 216
           RS+             K+ R +  A WI  T+F++LV+P++ E ++ Q      LQQ+ +
Sbjct: 59  RSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQI 118

Query: 215 LGSPPT 198
           L  P T
Sbjct: 119 LLGPNT 124



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>TOM22_SCHPO (O13813) Mitochondrial import receptor subunit tom22 (Mitochondrial|
           22 kDa outer membrane protein) (Translocase of outer
           membrane 22 kDa subunit)
          Length = 144

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 20/99 (20%), Positives = 43/99 (43%)
 Frame = -1

Query: 488 SSPDQNKGEGMASSSAVSKRGDAGGVLAAISRSSXXXXXXXXXXXXGKLLRSTGKAAWIA 309
           S  D++  EG+   + + +      ++    R               KL +  GK+ W+ 
Sbjct: 36  SDSDESDFEGLEEETIIDRIAALKEIVPVTWRVKIADGAKTATTGLSKLAQFGGKSMWVI 95

Query: 308 GTTFLVLVVPLIIEMDREQQMVDLDLQQQALLGSPPTLA 192
            T+ L+L VP ++ ++ E Q+ + + Q +   G+   +A
Sbjct: 96  STSALLLGVPFMMSLEEEAQLTEYEKQIKDQRGANEVIA 134



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>TOM22_YEAST (P49334) Mitochondrial import receptor subunit TOM22 (Mitochondrial|
           22 kDa outer membrane protein) (Translocase of outer
           membrane 22 kDa subunit) (Protein MAS17) (Mitochondrial
           17 kDa assembly protein)
          Length = 151

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
 Frame = -1

Query: 332 TGKAAWIAGTTFLVLVVPLIIEMDREQQMVDL----DLQQQA 219
           +G  AW   TT L+L VPL + +  EQQ++++    DLQ  A
Sbjct: 94  SGNLAWTLTTTALLLGVPLSLSILAEQQLIEMEKTFDLQSDA 135



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>GSPD2_DICD3 (Q01565) General secretion pathway protein D precursor (Pectic|
           enzymes secretion protein outD)
          Length = 710

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
 Frame = -1

Query: 506 SNQSLPSSPDQNKGEGMASSSAVSKRGDAGGVLAAISRSSX---XXXXXXXXXXXGKLLR 336
           SN S PSSP    G    S+S+    G + G  ++ S SS               G+ + 
Sbjct: 300 SNASRPSSP--RSGSSSNSNSSSGSSGSSSGSSSSSSSSSSMGFGSAFGSTSSSGGRTIT 357

Query: 335 STGKAAWIAG---TTFLVLVVPLIIEMDREQQMVDLDLQQQALL 213
             GK   +     T  L++  P  I  D EQ +  LD+++  +L
Sbjct: 358 IQGKEVTVRAHDQTNSLIITAPPDIMRDLEQVINQLDIRRPQVL 401



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>DPP3_RAT (O55096) Dipeptidyl-peptidase 3 (EC 3.4.14.4) (Dipeptidyl-peptidase|
           III) (DPP III) (Dipeptidyl aminopeptidase III)
           (Dipeptidyl arylamidase III)
          Length = 738

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +1

Query: 1   QDKLVILR*LYRAGEGAVTVTTT 69
           Q + VILR L  AGEG VTVT T
Sbjct: 570 QARFVILRVLLEAGEGLVTVTPT 592



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>DPP3_MOUSE (Q99KK7) Dipeptidyl-peptidase 3 (EC 3.4.14.4) (Dipeptidyl-peptidase|
           III) (DPP III) (Dipeptidyl aminopeptidase III)
           (Dipeptidyl arylamidase III)
          Length = 738

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = +1

Query: 1   QDKLVILR*LYRAGEGAVTVTTT 69
           Q + VILR L  AGEG VTVT T
Sbjct: 570 QARFVILRVLLEAGEGLVTVTPT 592


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,225,083
Number of Sequences: 219361
Number of extensions: 834206
Number of successful extensions: 2959
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2959
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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