ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart36c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470923.1| Oryza sativa (japonica cultivar-group), mRNA 234 2e-58
2dbj|AK108624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 176 5e-41
4gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genom... 176 5e-41
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
6gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, co... 52 0.002
7emb|AL592203.4| Human DNA sequence from clone RP11-268N1 on chro... 46 0.12
8dbj|AP002814.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.46
9dbj|AP001836.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.46
10gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, c... 40 7.2
11ref|XM_416815.1| PREDICTED: Gallus gallus similar to Nance-Horan... 40 7.2
12gb|AC144383.2| Pan troglodytes BAC clone CH251-321N7 from X, com... 40 7.2
13gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, co... 40 7.2
14emb|CR381579.22| Zebrafish DNA sequence from clone CH211-229N1 i... 40 7.2
15emb|CR786572.20| Zebrafish DNA sequence from clone DKEY-258F14 i... 40 7.2
16emb|AL929319.4| Zebrafish DNA sequence from clone CH211-59F17 in... 40 7.2
17emb|BX957359.10| Zebrafish DNA sequence from clone DKEY-234E8 in... 40 7.2
18emb|CR936370.6| Zebrafish DNA sequence from clone CH211-237H13 i... 40 7.2
19emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in ... 40 7.2
20emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in... 40 7.2
21emb|CR385065.21| Zebrafish DNA sequence from clone CH211-232F6 i... 40 7.2
22emb|CR762421.9| Zebrafish DNA sequence from clone DKEYP-15D8 in ... 40 7.2
23emb|BX901897.6| Zebrafish DNA sequence from clone DKEY-115H20 in... 40 7.2
24emb|AL157406.19| Human DNA sequence from clone RP3-380B4 on chro... 40 7.2
25emb|AL008627.1|HS130G2 Human DNA sequence from clone RP1-130G2 o... 40 7.2
26emb|AL732562.8| Zebrafish DNA sequence from clone CH211-103D22 i... 40 7.2
27emb|AL161498.2|ATCHRIV10 Arabidopsis thaliana DNA chromosome 4, ... 40 7.2
28emb|BX510655.18| Zebrafish DNA sequence from clone DKEY-94J16 in... 40 7.2
29emb|BX004972.12| Zebrafish DNA sequence from clone CH211-166A6 i... 40 7.2
30emb|BX511076.8| Zebrafish DNA sequence from clone CH211-276P17 i... 40 7.2
31emb|CR753873.6| Zebrafish DNA sequence from clone DKEY-145O23 in... 40 7.2
32emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in... 40 7.2
33emb|CR628392.7| Zebrafish DNA sequence from clone CH211-209N13 i... 40 7.2
34emb|BX649315.27| Zebrafish DNA sequence from clone DKEYP-101G1 i... 40 7.2
35emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 i... 40 7.2
36emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 i... 40 7.2
37emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i... 40 7.2
38emb|BX530022.5| Zebrafish DNA sequence from clone DKEY-29A22 in ... 40 7.2
39emb|BX957226.10| Zebrafish DNA sequence from clone CH211-110P13 ... 40 7.2
40emb|CR405690.6| Zebrafish DNA sequence from clone CH211-208M13 i... 40 7.2
41emb|BX677667.10| Zebrafish DNA sequence from clone DKEYP-104B3 i... 40 7.2
42emb|BX323800.8| Zebrafish DNA sequence from clone DKEYP-73A2 in ... 40 7.2
43emb|BX324143.9| Zebrafish DNA sequence from clone CH211-197D1 in... 40 7.2
44emb|BX649494.6| Zebrafish DNA sequence from clone DKEY-173J18 in... 40 7.2
45emb|BX005223.19| Zebrafish DNA sequence from clone DKEY-53K12, c... 40 7.2
46gb|AC114813.5| Homo sapiens BAC clone RP11-1325I10 from 2, compl... 40 7.2
47gb|AC139764.5| Homo sapiens 3 BAC RP11-125N10 (Roswell Park Canc... 40 7.2
48emb|BX324157.4| Zebrafish DNA sequence from clone DKEY-15N1 in l... 40 7.2
49gb|AC106817.2| Homo sapiens chromosome 5 clone RP11-636F7, compl... 40 7.2
50emb|BX663508.8| Zebrafish DNA sequence from clone CH211-144B6 in... 40 7.2
51emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 i... 40 7.2
52emb|BX005082.7| Zebrafish DNA sequence from clone DKEY-148A17 in... 40 7.2
53emb|CR854941.8| Zebrafish DNA sequence from clone CH211-214G6 in... 40 7.2
54emb|BX005431.3| Zebrafish DNA sequence from clone CH211-214G2 in... 40 7.2
55emb|CR352256.11| Zebrafish DNA sequence from clone CH211-218G23 ... 40 7.2
56emb|BX842686.19| Zebrafish DNA sequence from clone CH211-284L9 i... 40 7.2
57emb|BX897716.9| Zebrafish DNA sequence from clone DKEY-177F24 in... 40 7.2
58emb|BX571841.6| Zebrafish DNA sequence from clone DKEY-52H13 in ... 40 7.2
59emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 i... 40 7.2
60emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15,... 40 7.2
61emb|AL929522.11| Zebrafish DNA sequence from clone CH211-157B19 ... 40 7.2
62gb|AF077409.1|T24M8 Arabidopsis thaliana BAC T24M8 40 7.2
63emb|AL929239.6| Zebrafish DNA sequence from clone CH211-112F11, ... 40 7.2
64emb|AL607086.19| Mouse DNA sequence from clone RP23-269B7 on chr... 40 7.2
65emb|AL663101.8| Mouse DNA sequence from clone RP23-205M7 on chro... 40 7.2 
>ref|XM_470923.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1302

 Score =  234 bits (118), Expect = 2e-58
 Identities = 256/302 (84%)
 Strand = Plus / Minus

                                                                       
Query: 228 cttcatttctggaaaactttgttcaggacgccatttatggagccaccgatccctgctccc 287
           |||||||||| ||||| | |||||||||| || | || |||||| || || ||||| || 
Sbjct: 974 cttcatttcttgaaaagtctgttcaggacaccctgtagggagccccccatgcctgcaccg 915

                                                                       
Query: 288 acggtttcagcaagatacgcggcctccttataagatttccccaaatcaagagcacctttg 347
           |||| ||| || |||||||||||||||| | ||| ||||   | |||||||||| | |||
Sbjct: 914 acggcttctgctagatacgcggcctcctgaaaagttttctgaagatcaagagcatccttg 855

                                                                       
Query: 348 atgccgcgattcacaaatgtccatgtgtcgtgaaactctggagaattatctgttaacatg 407
           || | |||  |||||||||||||||| ||| | || ||||||||||| || |||||||| 
Sbjct: 854 atacggcggctcacaaatgtccatgtatcgcggaaatctggagaattgtcagttaacata 795

                                                                       
Query: 408 tacacttctgaagctgagtagatgccaccaagcacagtacgttttgcataccaatcaata 467
           ||||| ||||| |  |||||||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 794 tacacctctgaggtagagtagataccaccaagcacagtacgcttcacataccaatcaata 735

                                                                       
Query: 468 tctgatccatcatctccagcagcatgccaaatctcatccacaaggactgctctctgcttt 527
           ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 734 tctgatccagcatctccagcagcatgccaaatctcatcaacaaggacagctctctgcttt 675

             
Query: 528 aa 529
           ||
Sbjct: 674 aa 673
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>dbj|AK108624.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D11, full
            insert sequence
          Length = 1395

 Score =  234 bits (118), Expect = 2e-58
 Identities = 256/302 (84%)
 Strand = Plus / Minus

                                                                        
Query: 228  cttcatttctggaaaactttgttcaggacgccatttatggagccaccgatccctgctccc 287
            |||||||||| ||||| | |||||||||| || | || |||||| || || ||||| || 
Sbjct: 1040 cttcatttcttgaaaagtctgttcaggacaccctgtagggagccccccatgcctgcaccg 981

                                                                        
Query: 288  acggtttcagcaagatacgcggcctccttataagatttccccaaatcaagagcacctttg 347
            |||| ||| || |||||||||||||||| | ||| ||||   | |||||||||| | |||
Sbjct: 980  acggcttctgctagatacgcggcctcctgaaaagttttctgaagatcaagagcatccttg 921

                                                                        
Query: 348  atgccgcgattcacaaatgtccatgtgtcgtgaaactctggagaattatctgttaacatg 407
            || | |||  |||||||||||||||| ||| | || ||||||||||| || |||||||| 
Sbjct: 920  atacggcggctcacaaatgtccatgtatcgcggaaatctggagaattgtcagttaacata 861

                                                                        
Query: 408  tacacttctgaagctgagtagatgccaccaagcacagtacgttttgcataccaatcaata 467
            ||||| ||||| |  |||||||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 860  tacacctctgaggtagagtagataccaccaagcacagtacgcttcacataccaatcaata 801

                                                                        
Query: 468  tctgatccatcatctccagcagcatgccaaatctcatccacaaggactgctctctgcttt 527
            ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 800  tctgatccagcatctccagcagcatgccaaatctcatcaacaaggacagctctctgcttt 741

              
Query: 528  aa 529
            ||
Sbjct: 740  aa 739
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Minus

                                                                            
Query: 385      ctggagaattatctgttaacatgtacacttctgaagctgagtagatgccaccaagcacag 444
                |||||||||| || |||||||| ||||| ||||| |  |||||||| |||||||||||||
Sbjct: 16399046 ctggagaattgtcagttaacatatacacctctgaggtagagtagataccaccaagcacag 16398987

                                                                            
Query: 445      tacgttttgcataccaatcaatatctgatccatcatctccagcagcatgccaaatctcat 504
                |||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 16398986 tacgcttcacataccaatcaatatctgatccagcatctccagcagcatgccaaatctcat 16398927

                                         
Query: 505      ccacaaggactgctctctgctttaa 529
                | |||||||| ||||||||||||||
Sbjct: 16398926 caacaaggacagctctctgctttaa 16398902



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                            
Query: 228      cttcatttctggaaaactttgttcaggacgccatttatggagccaccgatccctgctccc 287
                |||||||||| ||||| | |||||||||| || | || |||||| || || ||||| || 
Sbjct: 16399987 cttcatttcttgaaaagtctgttcaggacaccctgtagggagccccccatgcctgcaccg 16399928

                                         
Query: 288      acggtttcagcaagatacgcggcct 312
                |||| ||| || |||||||||||||
Sbjct: 16399927 acggcttctgctagatacgcggcct 16399903
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>gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genomic sequence, complete
             sequence
          Length = 146775

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Plus

                                                                         
Query: 385   ctggagaattatctgttaacatgtacacttctgaagctgagtagatgccaccaagcacag 444
             |||||||||| || |||||||| ||||| ||||| |  |||||||| |||||||||||||
Sbjct: 68164 ctggagaattgtcagttaacatatacacctctgaggtagagtagataccaccaagcacag 68223

                                                                         
Query: 445   tacgttttgcataccaatcaatatctgatccatcatctccagcagcatgccaaatctcat 504
             |||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 68224 tacgcttcacataccaatcaatatctgatccagcatctccagcagcatgccaaatctcat 68283

                                      
Query: 505   ccacaaggactgctctctgctttaa 529
             | |||||||| ||||||||||||||
Sbjct: 68284 caacaaggacagctctctgctttaa 68308



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                         
Query: 228   cttcatttctggaaaactttgttcaggacgccatttatggagccaccgatccctgctccc 287
             |||||||||| ||||| | |||||||||| || | || |||||| || || ||||| || 
Sbjct: 67223 cttcatttcttgaaaagtctgttcaggacaccctgtagggagccccccatgcctgcaccg 67282

                                      
Query: 288   acggtttcagcaagatacgcggcct 312
             |||| ||| || |||||||||||||
Sbjct: 67283 acggcttctgctagatacgcggcct 67307
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Minus

                                                                            
Query: 385      ctggagaattatctgttaacatgtacacttctgaagctgagtagatgccaccaagcacag 444
                |||||||||| || |||||||| ||||| ||||| |  |||||||| |||||||||||||
Sbjct: 16392679 ctggagaattgtcagttaacatatacacctctgaggtagagtagataccaccaagcacag 16392620

                                                                            
Query: 445      tacgttttgcataccaatcaatatctgatccatcatctccagcagcatgccaaatctcat 504
                |||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 16392619 tacgcttcacataccaatcaatatctgatccagcatctccagcagcatgccaaatctcat 16392560

                                         
Query: 505      ccacaaggactgctctctgctttaa 529
                | |||||||| ||||||||||||||
Sbjct: 16392559 caacaaggacagctctctgctttaa 16392535



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                            
Query: 228      cttcatttctggaaaactttgttcaggacgccatttatggagccaccgatccctgctccc 287
                |||||||||| ||||| | |||||||||| || | || |||||| || || ||||| || 
Sbjct: 16393620 cttcatttcttgaaaagtctgttcaggacaccctgtagggagccccccatgcctgcaccg 16393561

                                         
Query: 288      acggtttcagcaagatacgcggcct 312
                |||| ||| || |||||||||||||
Sbjct: 16393560 acggcttctgctagatacgcggcct 16393536
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>gb|AC090164.22| Homo sapiens chromosome 15, clone RP11-14C10, complete sequence
          Length = 204674

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 226   ttcttcatttctggaaaactttgttc 251
             ||||||||||||||||||||||||||
Sbjct: 34857 ttcttcatttctggaaaactttgttc 34882
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>emb|AL592203.4| Human DNA sequence from clone RP11-268N1 on chromosome 1, complete
              sequence
          Length = 181535

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 126    gtatatattactatatacaatgt 148
              |||||||||||||||||||||||
Sbjct: 178030 gtatatattactatatacaatgt 178052
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>dbj|AP002814.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-882G5, complete
             sequence
          Length = 167198

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 129   tatattactatatacaatgtca 150
             ||||||||||||||||||||||
Sbjct: 53679 tatattactatatacaatgtca 53658
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>dbj|AP001836.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-693I21, complete
              sequence
          Length = 145782

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 129    tatattactatatacaatgtca 150
              ||||||||||||||||||||||
Sbjct: 137200 tatattactatatacaatgtca 137179
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>gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, complete sequence
          Length = 169497

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     tctgaccaccgactaaataa 74
              ||||||||||||||||||||
Sbjct: 105634 tctgaccaccgactaaataa 105615
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>ref|XM_416815.1| PREDICTED: Gallus gallus similar to Nance-Horan syndrome protein
            (LOC418616), mRNA
          Length = 6564

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 473  tccatcatctccagcagcat 492
            ||||||||||||||||||||
Sbjct: 4956 tccatcatctccagcagcat 4975
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>gb|AC144383.2| Pan troglodytes BAC clone CH251-321N7 from X, complete sequence
          Length = 149315

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    tatatattactatatacaat 146
              ||||||||||||||||||||
Sbjct: 144597 tatatattactatatacaat 144578
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>gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, complete sequence
          Length = 220804

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   tatatattactatatacaat 146
             ||||||||||||||||||||
Sbjct: 55434 tatatattactatatacaat 55453
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>emb|CR381579.22| Zebrafish DNA sequence from clone CH211-229N1 in linkage group 15,
             complete sequence
          Length = 130841

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 37674 tatattactatatacaatgt 37655
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>emb|CR786572.20| Zebrafish DNA sequence from clone DKEY-258F14 in linkage group 8,
             complete sequence
          Length = 137717

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 96629 tatattactatatacaatgt 96648
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>emb|AL929319.4| Zebrafish DNA sequence from clone CH211-59F17 in linkage group 10,
              complete sequence
          Length = 194614

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 109261 tatattactatatacaatgt 109280
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>emb|BX957359.10| Zebrafish DNA sequence from clone DKEY-234E8 in linkage group 7, complete
              sequence
          Length = 180396

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 170043 tatattactatatacaatgt 170024
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>emb|CR936370.6| Zebrafish DNA sequence from clone CH211-237H13 in linkage group 8,
             complete sequence
          Length = 114220

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 47884 tatattactatatacaatgt 47865
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>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5, complete
              sequence
          Length = 205281

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 141775 tatattactatatacaatgt 141794
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>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9,
             complete sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 59093 tatattactatatacaatgt 59112
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>emb|CR385065.21| Zebrafish DNA sequence from clone CH211-232F6 in linkage group 6,
              complete sequence
          Length = 194459

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 179674 tatattactatatacaatgt 179655
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>emb|CR762421.9| Zebrafish DNA sequence from clone DKEYP-15D8 in linkage group 1,
             complete sequence
          Length = 178015

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 35033 tatattactatatacaatgt 35052
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>emb|BX901897.6| Zebrafish DNA sequence from clone DKEY-115H20 in linkage group 1,
              complete sequence
          Length = 180979

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 112539 tatattactatatacaatgt 112558
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>emb|AL157406.19| Human DNA sequence from clone RP3-380B4 on chromosome 1p31.3-33
             Contains a novel gene, complete sequence
          Length = 123085

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   cttcatttctggaaaacttt 247
             ||||||||||||||||||||
Sbjct: 19659 cttcatttctggaaaacttt 19678
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>emb|AL008627.1|HS130G2 Human DNA sequence from clone RP1-130G2 on chromosome 6p22.2-22.3
              Contains the 3' end of the gene for a novel protein, a
              ribosomal protein L29 (RPL29) (HIP, HUMRPL29) pseudogene
              and a CpG island, complete sequence
          Length = 152077

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    aagatttccccaaatcaaga 338
              ||||||||||||||||||||
Sbjct: 103621 aagatttccccaaatcaaga 103602
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>emb|AL732562.8| Zebrafish DNA sequence from clone CH211-103D22 in linkage group 10
              Contains the 3' part of the cxadr gene (coxsackie virus and
              adenovirus receptor), a novel gene similar to AUTS2
              (autism-related protein 1) and four CpG islands, complete
              sequence
          Length = 187365

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 149825 tatattactatatacaatgt 149844
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>emb|AL161498.2|ATCHRIV10 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 10
          Length = 196296

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    atttctggaaaactttgttc 251
              ||||||||||||||||||||
Sbjct: 186093 atttctggaaaactttgttc 186112
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>emb|BX510655.18| Zebrafish DNA sequence from clone DKEY-94J16 in linkage group 5,
             complete sequence
          Length = 205761

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 32810 tatattactatatacaatgt 32829
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>emb|BX004972.12| Zebrafish DNA sequence from clone CH211-166A6 in linkage group 8,
             complete sequence
          Length = 151374

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 60687 tatattactatatacaatgt 60668
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>emb|BX511076.8| Zebrafish DNA sequence from clone CH211-276P17 in linkage group 17,
             complete sequence
          Length = 61227

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 50819 tatattactatatacaatgt 50800
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>emb|CR753873.6| Zebrafish DNA sequence from clone DKEY-145O23 in linkage group 5,
             complete sequence
          Length = 173372

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 65679 tatattactatatacaatgt 65698
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>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2,
              complete sequence
          Length = 209097

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 168913 tatattactatatacaatgt 168932
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>emb|CR628392.7| Zebrafish DNA sequence from clone CH211-209N13 in linkage group 5,
             complete sequence
          Length = 147269

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 83137 tatattactatatacaatgt 83118
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>emb|BX649315.27| Zebrafish DNA sequence from clone DKEYP-101G1 in linkage group 22,
              complete sequence
          Length = 175847

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 138677 tatattactatatacaatgt 138696
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>emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 in linkage group 23,
             complete sequence
          Length = 128483

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 19705 tatattactatatacaatgt 19724
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>emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 in linkage group 16,
             complete sequence
          Length = 161708

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 91199 tatattactatatacaatgt 91180
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>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12,
             complete sequence
          Length = 155592

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 41166 tatattactatatacaatgt 41185
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>emb|BX530022.5| Zebrafish DNA sequence from clone DKEY-29A22 in linkage group 21,
             complete sequence
          Length = 139415

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 82063 tatattactatatacaatgt 82082
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>emb|BX957226.10| Zebrafish DNA sequence from clone CH211-110P13 in linkage group 5,
             complete sequence
          Length = 149414

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 12577 tatattactatatacaatgt 12596
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>emb|CR405690.6| Zebrafish DNA sequence from clone CH211-208M13 in linkage group 22,
            complete sequence
          Length = 195552

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 496  aaatctcatccacaaggact 515
            ||||||||||||||||||||
Sbjct: 7856 aaatctcatccacaaggact 7837
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>emb|BX677667.10| Zebrafish DNA sequence from clone DKEYP-104B3 in linkage group 2,
             complete sequence
          Length = 155617

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 31986 tatattactatatacaatgt 32005
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>emb|BX323800.8| Zebrafish DNA sequence from clone DKEYP-73A2 in linkage group 11,
              complete sequence
          Length = 195592

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 142735 tatattactatatacaatgt 142754
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>emb|BX324143.9| Zebrafish DNA sequence from clone CH211-197D1 in linkage group 3,
             complete sequence
          Length = 105743

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 81561 tatattactatatacaatgt 81580
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>emb|BX649494.6| Zebrafish DNA sequence from clone DKEY-173J18 in linkage group 16,
             complete sequence
          Length = 175187

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 36672 tatattactatatacaatgt 36691
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>emb|BX005223.19| Zebrafish DNA sequence from clone DKEY-53K12, complete sequence
          Length = 242587

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 240322 tatattactatatacaatgt 240341
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>gb|AC114813.5| Homo sapiens BAC clone RP11-1325I10 from 2, complete sequence
          Length = 100132

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   atatattactatatacaatg 147
             ||||||||||||||||||||
Sbjct: 67114 atatattactatatacaatg 67133
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>gb|AC139764.5| Homo sapiens 3 BAC RP11-125N10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 50217

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   atcaatatctgatccatcat 480
             ||||||||||||||||||||
Sbjct: 36187 atcaatatctgatccatcat 36168
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>emb|BX324157.4| Zebrafish DNA sequence from clone DKEY-15N1 in linkage group 3, complete
              sequence
          Length = 272769

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 142566 tatattactatatacaatgt 142585
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>gb|AC106817.2| Homo sapiens chromosome 5 clone RP11-636F7, complete sequence
          Length = 169232

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   atgcggttcttcatttctgg 239
             ||||||||||||||||||||
Sbjct: 35090 atgcggttcttcatttctgg 35109
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>emb|BX663508.8| Zebrafish DNA sequence from clone CH211-144B6 in linkage group 22,
             complete sequence
          Length = 170295

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 22860 tatattactatatacaatgt 22879
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>emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 in linkage group 6,
             complete sequence
          Length = 181060

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 48025 tatattactatatacaatgt 48044
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>emb|BX005082.7| Zebrafish DNA sequence from clone DKEY-148A17 in linkage group 7,
              complete sequence
          Length = 151799

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 137471 tatattactatatacaatgt 137452
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>emb|CR854941.8| Zebrafish DNA sequence from clone CH211-214G6 in linkage group 12,
             complete sequence
          Length = 135174

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 31600 tatattactatatacaatgt 31619
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>emb|BX005431.3| Zebrafish DNA sequence from clone CH211-214G2 in linkage group 2,
             complete sequence
          Length = 200591

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 28332 tatattactatatacaatgt 28351
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>emb|CR352256.11| Zebrafish DNA sequence from clone CH211-218G23 in linkage group 11,
             complete sequence
          Length = 111902

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 34528 tatattactatatacaatgt 34547
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>emb|BX842686.19| Zebrafish DNA sequence from clone CH211-284L9 in linkage group 4,
             complete sequence
          Length = 71843

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 15309 tatattactatatacaatgt 15290
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>emb|BX897716.9| Zebrafish DNA sequence from clone DKEY-177F24 in linkage group 18,
              complete sequence
          Length = 123512

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 112004 tatattactatatacaatgt 111985
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>emb|BX571841.6| Zebrafish DNA sequence from clone DKEY-52H13 in linkage group 18,
             complete sequence
          Length = 105977

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   aaatctcatccacaaggact 515
             ||||||||||||||||||||
Sbjct: 22305 aaatctcatccacaaggact 22324
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>emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 in linkage group 16,
              complete sequence
          Length = 205755

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 133332 tatattactatatacaatgt 133313
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>emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15, complete sequence
          Length = 150641

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 19715 tatattactatatacaatgt 19734
to top
>emb|AL929522.11| Zebrafish DNA sequence from clone CH211-157B19 in linkage group 23,
             complete sequence
          Length = 165119

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tatattactatatacaatgt 148
             ||||||||||||||||||||
Sbjct: 90436 tatattactatatacaatgt 90455
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>gb|AF077409.1|T24M8 Arabidopsis thaliana BAC T24M8
          Length = 68251

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   atttctggaaaactttgttc 251
             ||||||||||||||||||||
Sbjct: 33990 atttctggaaaactttgttc 33971
to top
>emb|AL929239.6| Zebrafish DNA sequence from clone CH211-112F11, complete sequence
          Length = 155623

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tatattactatatacaatgt 148
              ||||||||||||||||||||
Sbjct: 127264 tatattactatatacaatgt 127283
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>emb|AL607086.19| Mouse DNA sequence from clone RP23-269B7 on chromosome 4, complete
              sequence
          Length = 193830

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    aagagggtttgtttataagg 123
              ||||||||||||||||||||
Sbjct: 141188 aagagggtttgtttataagg 141169
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>emb|AL663101.8| Mouse DNA sequence from clone RP23-205M7 on chromosome X, complete
              sequence
          Length = 216297

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    atttccccaaatcaagagca 341
              ||||||||||||||||||||
Sbjct: 132448 atttccccaaatcaagagca 132429


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,654,130
Number of Sequences: 3902068
Number of extensions: 4654130
Number of successful extensions: 82931
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82748
Number of HSP's gapped (non-prelim): 181
length of query: 531
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 508
effective length of database: 17,143,297,704
effective search space: 8708795233632
effective search space used: 8708795233632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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